The identification of coupled map lattice models for autonomous cellular neural network patterns

The identification problem for spatiotemporal patterns which are generated by autonomous Cellular Neural Networks (CNN) is investigated in this paper. The application of traditional identification algorithms to these special spatiotemporal systems can produce poor models due to the inherent piecewise nonlinear structure of CNN. To solve this problem, a new type of Coupled Map Lattice model with output constraints and corresponding identification algorithms are proposed in the present study. Numerical examples show that the identified CML models have good prediction capabilities even over the long term and the main dynamics of the original patterns appears to be well represented

Generalised cellular neural networks (GCNNs) constructed using particle swarm optimisation for spatio-temporal evolutionary pattern identification

Particle swarm optimization (PSO) is introduced to implement a new constructive learning algorithm for training generalized cellular neural networks (GCNNs) for the identification of spatio-temporal evolutionary (STE) systems. The basic idea of the new PSO-based learning algorithm is to successively approximate the desired signal by progressively pursuing relevant orthogonal projections. This new algorithm will thus be referred to as the orthogonal projection pursuit (OPP) algorithm, which is in mechanism similar to the conventional projection pursuit approach. A novel two-stage hybrid training scheme is proposed for constructing a parsimonious GCNN model. In the first stage, the orthogonal projection pursuit algorithm is applied to adaptively and successively augment the network, where adjustable parameters of the associated units are optimized using a particle swarm optimizer. The resultant network model produced at the first stage may be redundant. In the second stage, a forward orthogonal regression (FOR) algorithm, aided by mutual information estimation, is applied to re. ne and improve the initially trained network. The effectiveness and performance of the proposed method is validated by applying the new modeling framework to a spatio-temporal evolutionary system identification problem

Identification of excitable media using a scalar coupled map lattice model

The identification problem for excitable media is investigated in this paper. A new scalar coupled map lattice (SCML) model is introduced and the orthogonal least squares algorithm is employed to determinate the structure of the SCML model and to estimate the associated parameters. A simulated pattern and a pattern observed directly from a real Belousov-Zhabotinsky reaction are identified. The identified SCML models are shown to possess almost the same local dynamics as the original systems and are able to provide good long term predictions

A simple scalar coupled map lattice model for excitable media

A simple scalar coupled map lattice model for excitable media is intensively analysed in this paper. This model is used to explain the excitability of excitable media, and a Hopf-like bifurcation is employed to study the different spatio-temporal patterns produced by the model. Several basic rules for the construction of these kinds of models are proposed. Illustrative examples demonstrate that the sCML model is capable of generating complex spatiotemporal patterns

Generalised additive multiscale wavelet models constructed using particle swarm optimisation and mutual information for spatio-temporal evolutionary system representation

A new class of generalised additive multiscale wavelet models (GAMWMs) is introduced for high dimensional spatio-temporal evolutionary (STE) system identification. A novel two-stage hybrid learning scheme is developed for constructing such an additive wavelet model. In the first stage, a new orthogonal projection pursuit (OPP) method, implemented using a particle swarm optimisation(PSO) algorithm, is proposed for successively augmenting an initial coarse wavelet model, where relevant parameters of the associated wavelets are optimised using a particle swarm optimiser. The resultant network model, obtained in the first stage, may however be a redundant model. In the second stage, a forward orthogonal regression (FOR) algorithm, implemented using a mutual information method, is then applied to refine and improve the initially constructed wavelet model. The proposed two-stage hybrid method can generally produce a parsimonious wavelet model, where a ranked list of wavelet functions, according to the capability of each wavelet to represent the total variance in the desired system output signal is produced. The proposed new modelling framework is applied to real observed images, relative to a chemical reaction exhibiting a spatio-temporal evolutionary behaviour, and the associated identification results show that the new modelling framework is applicable and effective for handling high dimensional identification problems of spatio-temporal evolution sytems

A wavelet neural network model for spatio-temporal image processing and modeling

Spatio-temporal images are a class of complex dynamical systems that evolve over both space and time. Compared with pure temporal processes, the identification of spatio-temporal models from observed images is much more difficult and quite challenging. Starting with an assumption that there is no a priori information about the true model but only observed data are available, this work introduces a new type of wavelet network that utilizes the easy tractability and exploits the good properties of multiscale wavelet decompositions to represent the rules of the associated spatio-temporal evolutionary system. An application to a chemical reaction exhibiting a spatio-temporal evolutionary behaviour, is investigated to demonstrate the application of the proposed modeling and learning approaches.This work was supported in part by EPSRC under Grant: EP/I011056/1 and Platform Grant EP/H00453X/

Investigating biocomplexity through the agent-based paradigm.

Capturing the dynamism that pervades biological systems requires a computational approach that can accommodate both the continuous features of the system environment as well as the flexible and heterogeneous nature of component interactions. This presents a serious challenge for the more traditional mathematical approaches that assume component homogeneity to relate system observables using mathematical equations. While the homogeneity condition does not lead to loss of accuracy while simulating various continua, it fails to offer detailed solutions when applied to systems with dynamically interacting heterogeneous components. As the functionality and architecture of most biological systems is a product of multi-faceted individual interactions at the sub-system level, continuum models rarely offer much beyond qualitative similarity. Agent-based modelling is a class of algorithmic computational approaches that rely on interactions between Turing-complete finite-state machines--or agents--to simulate, from the bottom-up, macroscopic properties of a system. In recognizing the heterogeneity condition, they offer suitable ontologies to the system components being modelled, thereby succeeding where their continuum counterparts tend to struggle. Furthermore, being inherently hierarchical, they are quite amenable to coupling with other computational paradigms. The integration of any agent-based framework with continuum models is arguably the most elegant and precise way of representing biological systems. Although in its nascence, agent-based modelling has been utilized to model biological complexity across a broad range of biological scales (from cells to societies). In this article, we explore the reasons that make agent-based modelling the most precise approach to model biological systems that tend to be non-linear and complex

Synchronization in complex networks

Synchronization processes in populations of locally interacting elements are in the focus of intense research in physical, biological, chemical, technological and social systems. The many efforts devoted to understand synchronization phenomena in natural systems take now advantage of the recent theory of complex networks. In this review, we report the advances in the comprehension of synchronization phenomena when oscillating elements are constrained to interact in a complex network topology. We also overview the new emergent features coming out from the interplay between the structure and the function of the underlying pattern of connections. Extensive numerical work as well as analytical approaches to the problem are presented. Finally, we review several applications of synchronization in complex networks to different disciplines: biological systems and neuroscience, engineering and computer science, and economy and social sciences.Comment: Final version published in Physics Reports. More information available at http://synchronets.googlepages.com