The Earth Observation Data for Habitat Monitoring (EODHaM) system

To support decisions relating to the use and conservation of protected areas and surrounds, the EU-funded BIOdiversity multi-SOurce monitoring System: from Space TO Species (BIO_SOS) project has developed the Earth Observation Data for HAbitat Monitoring (EODHaM) system for consistent mapping and monitoring of biodiversity. The EODHaM approach has adopted the Food and Agriculture Organization Land Cover Classification System (LCCS) taxonomy and translates mapped classes to General Habitat Categories (GHCs) from which Annex I habitats (EU Habitats Directive) can be defined. The EODHaM system uses a combination of pixel and object-based procedures. The 1st and 2nd stages use earth observation (EO) data alone with expert knowledge to generate classes according to the LCCS taxonomy (Levels 1 to 3 and beyond). The 3rd stage translates the final LCCS classes into GHCs from which Annex I habitat type maps are derived. An additional module quantifies changes in the LCCS classes and their components, indices derived from earth observation, object sizes and dimensions and the translated habitat maps (i.e., GHCs or Annex I). Examples are provided of the application of EODHaM system elements to protected sites and their surrounds in Italy, Wales (UK), the Netherlands, Greece, Portugal and India

A Python-Based Open Source System for Geographic Object-Based Image Analysis (GEOBIA) Utilizing Raster Attribute Tables

A modular system for performing Geographic Object-Based Image Analysis (GEOBIA), using entirely open source (General Public License compatible) software, is presented based around representing objects as raster clumps and storing attributes as a raster attribute table (RAT). The system utilizes a number of libraries, developed by the authors: The Remote Sensing and GIS Library (RSGISLib), the Raster I/O Simplification (RIOS) Python Library, the KEA image format and TuiView image viewer. All libraries are accessed through Python, providing a common interface on which to build processing chains. Three examples are presented, to demonstrate the capabilities of the system: (1) classification of mangrove extent and change in French Guiana; (2) a generic scheme for the classification of the UN-FAO land cover classification system (LCCS) and their subsequent translation to habitat categories; and (3) a national-scale segmentation for Australia. The system presented provides similar functionality to existing GEOBIA packages, but is more flexible, due to its modular environment, capable of handling complex classification processes and applying them to larger datasets

Land Cover Mapping using Digital Earth Australia

This study establishes the use of the Earth Observation Data for Ecosystem Monitoring (EODESM) to generate land cover and change classifications based on the United Nations Food and Agriculture Organisation (FAO) Land Cover Classification System (LCCS) and environmental variables (EVs) available within, or accessible from, Geoscience Australia’s (GA) Digital Earth Australia (DEA). Classifications representing the LCCS Level 3 taxonomy (8 categories representing semi-(natural) and/or cultivated/managed vegetation or natural or artificial bare or water bodies) were generated for two time periods and across four test sites located in the Australian states of QueenslandandNewSouthWales. Thiswasachievedbyprogressivelyandhierarchicallycombining existing time-static layers relating to (a) the extent of artificial surfaces (urban, water) and agriculture and (b) annual summaries of EVs relating to the extent of vegetation (fractional cover) and water (hydroperiod, intertidal area, mangroves) generated through DEA. More detailed classifications that integrated information on, for example, forest structure (based on vegetation cover (%) and height (m); time-static for 2009) and hydroperiod (months), were subsequently produced for each time-step. The overall accuracies of the land cover classifications were dependent upon those reported for the individual input layers, with these ranging from 80% (for cultivated, urban and artificial water) to over95%(forhydroperiodandfractionalcover).Thechangesidentifiedincludemangrovediebackin the southeastern Gulf of Carpentaria and reduced dam water levels and an associated expansion of vegetation in Lake Ross, Burdekin. The extent of detected changes corresponded with those observed using time-series of RapidEye data (2014 to 2016; for the Gulf of Carpentaria) and Google Earth imagery (2009–2016 for Lake Ross). This use case demonstrates the capacity and a conceptual framework to implement EODESM within DEA and provides countries using the Open Data Cube (ODC) environment with the opportunity to routinely generate land cover maps from Landsat or Sentinel-1/2 data, at least annually, using a consistent and internationally recognised taxonomy

REMAP:An online remote sensing application for land cover classification and monitoring

Recent assessments of progress towards global conservation targets have revealed a paucity of indicators suitable for assessing the changing state of ecosystems. Moreover, land managers and planners are often unable to gain timely access to the maps they need to support their routine decision-making. This deficiency is partly due to a lack of suitable data on ecosystem change, driven mostly by the considerable technical expertise needed to develop ecosystem maps from remote sensing data. We have developed a free and open-access online remote sensing and environmental modelling application, the Remote Ecosystem Monitoring and Assessment Pipeline (Remap; https://remap-app.org), that enables volunteers, managers and scientists with little or no experience in remote sensing to generate classifications (maps) of land cover and land use change over time. Remap utilizes the geospatial data storage and analysis capacity of Google Earth Engine and requires only spatially resolved training data that define map classes of interest (e.g. ecosystem types). The training data, which can be uploaded or annotated interactively within Remap, are used in a random forest classification of up to 13 publicly available predictor datasets to assign all pixels in a focal region to map classes. Predictor datasets available in Remap represent topographic (e.g. slope, elevation), spectral (archival Landsat image composites) and climatic variables (precipitation, temperature) that are relevant to the distribution of ecosystems and land cover classes. The ability of Remap to develop and export high-quality classified maps in a very short (<10 min) time frame represents a considerable advance towards globally accessible and free application of remote sensing technology. By enabling access to data and simplifying remote sensing classifications, Remap can catalyse the monitoring of land use and change to support environmental conservation, including developing inventories of biodiversity, identifying hotspots of ecosystem diversity, ecosystem-based spatial conservation planning, mapping ecosystem loss at local scales and supporting environmental education initiatives

Knowledge-Based Classification of Grassland Ecosystem Based on Multi-Temporal WorldView-2 Data and FAO-LCCS Taxonomy

Grassland ecosystems can provide a variety of services for humans, such as carbon storage, food production, crop pollination and pest regulation. However, grasslands are today one of the most endangered ecosystems due to land use change, agricultural intensification, land abandonment as well as climate change. The present study explores the performance of a knowledge-driven GEOgraphic-Object—based Image Analysis (GEOBIA) learning scheme to classify Very High Resolution(VHR)imagesfornaturalgrasslandecosystemmapping. Theclassificationwasappliedto a Natura 2000 protected area in Southern Italy. The Food and Agricultural Organization Land Cover Classification System (FAO-LCCS) hierarchical scheme was instantiated in the learning phase of the algorithm. Four multi-temporal WorldView-2 (WV-2) images were classified by combining plant phenology and agricultural practices rules with prior-image spectral knowledge. Drawing on this knowledge, spectral bands and entropy features from one single date (Post Peak of Biomass) were firstly used for multiple-scale image segmentation into Small Objects (SO) and Large Objects (LO). Thereafter, SO were labelled by considering spectral and context-sensitive features from the whole multi-seasonal data set available together with ancillary data. Lastly, the labelled SO were overlaid to LO segments and, in turn, the latter were labelled by adopting FAO-LCCS criteria about the SOs presence dominance in each LO. Ground reference samples were used only for validating the SO and LO output maps. The knowledge driven GEOBIA classifier for SO classification obtained an OA value of 97.35% with an error of 0.04. For LO classification the value was 75.09% with an error of 0.70. At SO scale, grasslands ecosystem was classified with 92.6%, 99.9% and 96.1% of User’s, Producer’s Accuracy and F1-score, respectively. The findings reported indicate that the knowledge-driven approach not only can be applied for (semi)natural grasslands ecosystem mapping in vast and not accessible areas but can also reduce the costs of ground truth data acquisition. The approach used may provide different level of details (small and large objects in the scene) but also indicates how to design and validate local conservation policies