281 research outputs found
A fast approach to removing muscle artifacts for EEG with signal serialization based Ensemble Empirical Mode Decomposition
An electroencephalogram (EEG) is an electrophysiological signal reflecting the functional state of the brain. As the control signal of the brain-computer interface (BCI), EEG may build a bridge between humans and computers to improve the life quality for patients with movement disorders. The collected EEG signals are extremely susceptible to the contamination of electromyography (EMG) artifacts, affecting their original characteristics. Therefore, EEG denoising is an essential preprocessing step in any BCI system. Previous studies have confirmed that the combination of ensemble empirical mode decomposition (EEMD) and canonical correlation analysis (CCA) can effectively suppress EMG artifacts. However, the time-consuming iterative process of EEMD limits the application of the EEMD-CCA method in real-time monitoring of BCI. Compared with the existing EEMD, the recently proposed signal serialization based EEMD (sEEMD) is a good choice to provide effective signal analysis and fast mode decomposition. In this study, an EMG denoising method based on sEEMD and CCA is discussed. All of the analyses are carried out on semi-simulated data. The results show that, in terms of frequency and amplitude, the intrinsic mode functions (IMFs) decomposed by sEEMD are consistent with the IMFs obtained by EEMD. There is no significant difference in the ability to separate EMG artifacts from EEG signals between the sEEMD-CCA method and the EEMD-CCA method (p > 0.05). Even in the case of heavy contamination (signal-to-noise ratio is less than 2 dB), the relative root mean squared error is about 0.3, and the average correlation coefficient remains above 0.9. The running speed of the sEEMD-CCA method to remove EMG artifacts is significantly improved in comparison with that of EEMD-CCA method (p < 0.05). The running time of the sEEMD-CCA method for three lengths of semi-simulated data is shortened by more than 50%. This indicates that sEEMD-CCA is a promising tool for EMG artifact removal in real-time BCI systems.Fil: Dai, Yangyang. Nankai University; ChinaFil: Duan, Feng. Nankai University; ChinaFil: Feng, Fan. Nankai University; ChinaFil: Sun, Zhe. RIKEN; JapónFil: Zhang, Yu. Lehigh University Bethlehem; Estados UnidosFil: Caiafa, César Federico. Provincia de Buenos Aires. Gobernación. Comisión de Investigaciones CientÃficas. Instituto Argentino de RadioastronomÃa. Consejo Nacional de Investigaciones CientÃficas y Técnicas. Centro CientÃfico Tecnológico Conicet - La Plata. Instituto Argentino de RadioastronomÃa; ArgentinaFil: Marti Puig, Pere. Central University of Catalonia; EspañaFil: Solé Casals, Jordi. Central University of Catalonia; Españ
Data-driven multivariate and multiscale methods for brain computer interface
This thesis focuses on the development of data-driven multivariate and multiscale methods
for brain computer interface (BCI) systems. The electroencephalogram (EEG), the
most convenient means to measure neurophysiological activity due to its noninvasive nature,
is mainly considered. The nonlinearity and nonstationarity inherent in EEG and its
multichannel recording nature require a new set of data-driven multivariate techniques to
estimate more accurately features for enhanced BCI operation. Also, a long term goal
is to enable an alternative EEG recording strategy for achieving long-term and portable
monitoring.
Empirical mode decomposition (EMD) and local mean decomposition (LMD), fully
data-driven adaptive tools, are considered to decompose the nonlinear and nonstationary
EEG signal into a set of components which are highly localised in time and frequency. It
is shown that the complex and multivariate extensions of EMD, which can exploit common
oscillatory modes within multivariate (multichannel) data, can be used to accurately
estimate and compare the amplitude and phase information among multiple sources, a
key for the feature extraction of BCI system. A complex extension of local mean decomposition
is also introduced and its operation is illustrated on two channel neuronal
spike streams. Common spatial pattern (CSP), a standard feature extraction technique
for BCI application, is also extended to complex domain using the augmented complex
statistics. Depending on the circularity/noncircularity of a complex signal, one of the
complex CSP algorithms can be chosen to produce the best classification performance
between two different EEG classes.
Using these complex and multivariate algorithms, two cognitive brain studies are
investigated for more natural and intuitive design of advanced BCI systems. Firstly, a Yarbus-style auditory selective attention experiment is introduced to measure the user
attention to a sound source among a mixture of sound stimuli, which is aimed at improving
the usefulness of hearing instruments such as hearing aid. Secondly, emotion experiments
elicited by taste and taste recall are examined to determine the pleasure and displeasure
of a food for the implementation of affective computing. The separation between two
emotional responses is examined using real and complex-valued common spatial pattern
methods.
Finally, we introduce a novel approach to brain monitoring based on EEG recordings
from within the ear canal, embedded on a custom made hearing aid earplug. The new
platform promises the possibility of both short- and long-term continuous use for standard
brain monitoring and interfacing applications
Electroencephalographic Signal Processing and Classification Techniques for Noninvasive Motor Imagery Based Brain Computer Interface
In motor imagery (MI) based brain-computer interface (BCI), success depends on reliable processing of the noisy, non-linear, and non-stationary brain activity signals for extraction of features and effective classification of MI activity as well as translation to the corresponding intended actions. In this study, signal processing and classification techniques are presented for electroencephalogram (EEG) signals for motor imagery based brain-computer interface. EEG signals have been acquired placing the electrodes following the international 10-20 system. The acquired signals have been pre-processed removing artifacts using empirical mode decomposition (EMD) and two extended versions of EMD, ensemble empirical mode decomposition (EEMD), and multivariate empirical mode decomposition (MEMD) leading to better signal to noise ratio (SNR) and reduced mean square error (MSE) compared to independent component analysis (ICA). EEG signals have been decomposed into independent mode function (IMFs) that are further processed to extract features like sample entropy (SampEn) and band power (BP). The extracted features have been used in support vector machines to characterize and identify MI activities. EMD and its variants, EEMD, MEMD have been compared with common spatial pattern (CSP) for different MI activities. SNR values from EMD, EEMD and MEMD (4.3, 7.64, 10.62) are much better than ICA (2.1) but accuracy of MI activity identification is slightly better for ICA than EMD using BP and SampEn. Further work is outlined to include more features with larger database for better classification accuracy
Removal of Muscle Artifacts from Single-Channel EEG Based on Ensemble Empirical Mode Decomposition and Multiset Canonical Correlation Analysis
Electroencephalogram (EEG) recordings are often contaminated with muscle artifacts. This disturbing muscular activity strongly affects the visual analysis of EEG and impairs the results of EEG signal processing such as brain connectivity analysis. If multichannel EEG recordings are available, then there exist a considerable range of methods which can remove or to some extent suppress the distorting effect of such artifacts. Yet to our knowledge, there is no existing means to remove muscle artifacts from single-channel EEG recordings. Moreover, considering the recently increasing need for biomedical signal processing in ambulatory situations, it is crucially important to develop single-channel techniques. In this work, we propose a simple, yet effective method to achieve the muscle artifact removal from single-channel EEG, by combining ensemble empirical mode decomposition (EEMD) with multiset canonical correlation analysis (MCCA). We demonstrate the performance of the proposed method through numerical simulations and application to real EEG recordings contaminated with muscle artifacts. The proposed method can successfully remove muscle artifacts without altering the recorded underlying EEG activity. It is a promising tool for real-world biomedical signal processing applications
Motion Artifact Processing Techniques for Physiological Signals
The combination of reducing birth rate and increasing life expectancy continues to drive
the demographic shift toward an ageing population and this is placing an ever-increasing
burden on our healthcare systems. The urgent need to address this so called healthcare
\time bomb" has led to a rapid growth in research into ubiquitous, pervasive and
distributed healthcare technologies where recent advances in signal acquisition, data
storage and communication are helping such systems become a reality. However, similar
to recordings performed in the hospital environment, artifacts continue to be a major
issue for these systems. The magnitude and frequency of artifacts can vary signicantly
depending on the recording environment with one of the major contributions due to
the motion of the subject or the recording transducer. As such, this thesis addresses
the challenges of the removal of this motion artifact removal from various physiological
signals.
The preliminary investigations focus on artifact identication and the tagging of physiological
signals streams with measures of signal quality. A new method for quantifying
signal quality is developed based on the use of inexpensive accelerometers which facilitates
the appropriate use of artifact processing methods as needed. These artifact
processing methods are thoroughly examined as part of a comprehensive review of the
most commonly applicable methods. This review forms the basis for the comparative
studies subsequently presented. Then, a simple but novel experimental methodology
for the comparison of artifact processing techniques is proposed, designed and tested
for algorithm evaluation. The method is demonstrated to be highly eective for the
type of artifact challenges common in a connected health setting, particularly those concerned
with brain activity monitoring. This research primarily focuses on applying the
techniques to functional near infrared spectroscopy (fNIRS) and electroencephalography
(EEG) data due to their high susceptibility to contamination by subject motion related
artifact.
Using the novel experimental methodology, complemented with simulated data, a comprehensive
comparison of a range of artifact processing methods is conducted, allowing
the identication of the set of the best performing methods. A novel artifact removal
technique is also developed, namely ensemble empirical mode decomposition with canonical
correlation analysis (EEMD-CCA), which provides the best results when applied on
fNIRS data under particular conditions. Four of the best performing techniques were
then tested on real ambulatory EEG data contaminated with movement artifacts comparable
to those observed during in-home monitoring.
It was determined that when analysing EEG data, the Wiener lter is consistently
the best performing artifact removal technique. However, when employing the fNIRS
data, the best technique depends on a number of factors including: 1) the availability
of a reference signal and 2) whether or not the form of the artifact is known. It is
envisaged that the use of physiological signal monitoring for patient healthcare will grow
signicantly over the next number of decades and it is hoped that this thesis will aid in
the progression and development of artifact removal techniques capable of supporting
this growth
A hybrid brain-computer interface based on motor intention and visual working memory
Non-invasive electroencephalography (EEG) based brain-computer interface (BCI) is able to provide alternative means for people with disabilities to communicate with and control over external assistive devices. A hybrid BCI is designed and developed for following two types of system (control and monitor).
Our first goal is to create a signal decoding strategy that allows people with limited motor control to have more command over potential prosthetic devices. Eight healthy subjects were recruited to perform visual cues directed reaching tasks. Eye and motion artifacts were identified and removed to ensure that the subjects\u27 visual fixation to the target locations would have little or no impact on the final result. We applied a Fisher Linear Discriminate (FLD) analysis for single-trial classification of the EEG to decode the intended arm movement in the left, right, and forward directions (before the onsets of actual movements). The mean EEG signal amplitude near the PPC region 271-310 ms after visual stimulation was found to be the dominant feature for best classification results. A signal scaling factor developed was found to improve the classification accuracy from 60.11% to 93.91% in the two-class (left versus right) scenario. This result demonstrated great promises for BCI neuroprosthetics applications, as motor intention decoding can be served as a prelude to the classification of imagined motor movement to assist in motor disable rehabilitation, such as prosthetic limb or wheelchair control.
The second goal is to develop the adaptive training for patients with low visual working memory (VWM) capacity to improve cognitive abilities and healthy individuals who seek to enhance their intellectual performance. VWM plays a critical role in preserving and processing information. It is associated with attention, perception and reasoning, and its capacity can be used as a predictor of cognitive abilities. Recent evidence has suggested that with training, one can enhance the VWM capacity and attention over time. Not only can these studies reveal the characteristics of VWM load and the influences of training, they may also provide effective rehabilitative means for patients with low VWM capacity. However, few studies have investigated VWM over a long period of time, beyond 5-weeks.
In this study, a combined behavioral approach and EEG was used to investigate VWM load, gain, and transfer. The results reveal that VWM capacity is directly correlated to the reaction time and contralateral delay amplitude (CDA). The approximate magic number 4 was observed through the event-related potentials (ERPs) waveforms, where the average capacity is 2.8-item from 15 participants. In addition, the findings indicate that VWM capacity can be improved through adaptive training. Furthermore, after training exercises, participants from the training group are able to improve their performance accuracies dramatically compared to the control group. Adaptive training gains on non-trained tasks can also be observed at 12 weeks after training.
Therefore, we conclude that all participants can benefit from training gains, and augmented VWM capacity can be sustained over a long period of time. Our results suggest that this form of training can significantly improve cognitive function and may be useful for enhancing the user performance on neuroprosthetics device
Motion Artifacts Correction from Single-Channel EEG and fNIRS Signals using Novel Wavelet Packet Decomposition in Combination with Canonical Correlation Analysis
The electroencephalogram (EEG) and functional near-infrared spectroscopy
(fNIRS) signals, highly non-stationary in nature, greatly suffers from motion
artifacts while recorded using wearable sensors. This paper proposes two robust
methods: i) Wavelet packet decomposition (WPD), and ii) WPD in combination with
canonical correlation analysis (WPD-CCA), for motion artifact correction from
single-channel EEG and fNIRS signals. The efficacy of these proposed techniques
is tested using a benchmark dataset and the performance of the proposed methods
is measured using two well-established performance matrices: i) Difference in
the signal to noise ratio ({\Delta}SNR) and ii) Percentage reduction in motion
artifacts ({\eta}). The proposed WPD-based single-stage motion artifacts
correction technique produces the highest average {\Delta}SNR (29.44 dB) when
db2 wavelet packet is incorporated whereas the greatest average {\eta} (53.48%)
is obtained using db1 wavelet packet for all the available 23 EEG recordings.
Our proposed two-stage motion artifacts correction technique i.e. the WPD-CCA
method utilizing db1 wavelet packet has shown the best denoising performance
producing an average {\Delta}SNR and {\eta} values of 30.76 dB and 59.51%,
respectively for all the EEG recordings. On the other hand, the two-stage
motion artifacts removal technique i.e. WPD-CCA has produced the best average
{\Delta}SNR (16.55 dB, utilizing db1 wavelet packet) and largest average {\eta}
(41.40%, using fk8 wavelet packet). The highest average {\Delta}SNR and {\eta}
using single-stage artifacts removal techniques (WPD) are found as 16.11 dB and
26.40%, respectively for all the fNIRS signals using fk4 wavelet packet. In
both EEG and fNIRS modalities, the percentage reduction in motion artifacts
increases by 11.28% and 56.82%, respectively when two-stage WPD-CCA techniques
are employed.Comment: 25 pages, 10 figures and 2 table
Performance evaluation of the Hilbert–Huang transform for respiratory sound analysis and its application to continuous adventitious sound characterization
© 2016. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/The use of the Hilbert–Huang transform in the analysis of biomedical signals has increased during the past few years, but its use for respiratory sound (RS) analysis is still limited. The technique includes two steps: empirical mode decomposition (EMD) and instantaneous frequency (IF) estimation. Although the mode mixing (MM) problem of EMD has been widely discussed, this technique continues to be used in many RS analysis algorithms.
In this study, we analyzed the MM effect in RS signals recorded from 30 asthmatic patients, and studied the performance of ensemble EMD (EEMD) and noise-assisted multivariate EMD (NA-MEMD) as means for preventing this effect. We propose quantitative parameters for measuring the size, reduction of MM, and residual noise level of each method. These parameters showed that EEMD is a good solution for MM, thus outperforming NA-MEMD. After testing different IF estimators, we propose Kay¿s method to calculate an EEMD-Kay-based Hilbert spectrum that offers high energy concentrations and high time and high frequency resolutions. We also propose an algorithm for the automatic characterization of continuous adventitious sounds (CAS). The tests performed showed that the proposed EEMD-Kay-based Hilbert spectrum makes it possible to determine CAS more precisely than other conventional time-frequency techniques.Postprint (author's final draft
Data-driven time-frequency analysis of multivariate data
Empirical Mode Decomposition (EMD) is a data-driven method for the decomposition
and time-frequency analysis of real world nonstationary signals. Its main advantages over
other time-frequency methods are its locality, data-driven nature, multiresolution-based
decomposition, higher time-frequency resolution and its ability to capture oscillation of
any type (nonharmonic signals). These properties have made EMD a viable tool for real
world nonstationary data analysis.
Recent advances in sensor and data acquisition technologies have brought to light
new classes of signals containing typically several data channels. Currently, such signals are almost invariably processed channel-wise, which is suboptimal. It is, therefore,
imperative to design multivariate extensions of the existing nonlinear and nonstationary
analysis algorithms as they are expected to give more insight into the dynamics and the
interdependence between multiple channels of such signals.
To this end, this thesis presents multivariate extensions of the empirical mode de-
composition algorithm and illustrates their advantages with regards to multivariate non-
stationary data analysis. Some important properties of such extensions are also explored,
including their ability to exhibit wavelet-like dyadic filter bank structures for white Gaussian noise (WGN), and their capacity to align similar oscillatory modes from multiple
data channels. Owing to the generality of the proposed methods, an improved multi-
variate EMD-based algorithm is introduced which solves some inherent problems in the
original EMD algorithm. Finally, to demonstrate the potential of the proposed methods,
simulations on the fusion of multiple real world signals (wind, images and inertial body
motion data) support the analysis
Intrinsic multi-scale analysis: a multi-variate empirical mode decomposition framework.
A novel multi-scale approach for quantifying both inter- and intra-component dependence of a complex system is introduced. This is achieved using empirical mode decomposition (EMD), which, unlike conventional scale-estimation methods, obtains a set of scales reflecting the underlying oscillations at the intrinsic scale level. This enables the data-driven operation of several standard data-association measures (intrinsic correlation, intrinsic sample entropy (SE), intrinsic phase synchrony) and, at the same time, preserves the physical meaning of the analysis. The utility of multi-variate extensions of EMD is highlighted, both in terms of robust scale alignment between system components, a pre-requisite for inter-component measures, and in the estimation of feature relevance. We also illuminate that the properties of EMD scales can be used to decouple amplitude and phase information, a necessary step in order to accurately quantify signal dynamics through correlation and SE analysis which are otherwise not possible. Finally, the proposed multi-scale framework is applied to detect directionality, and higher order features such as coupling and regularity, in both synthetic and biological systems
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