Dynamics Analysis and Biomass Productivity Optimisation of a Microbial Cultivation Process through Substrate Regulation

A microbial cultivation process model with variable biomass yield, control of substrate concentration, and biomass recycle is formulated, where the biochemical kinetics follows an extension of the Monod and Contois models. Control of substrate concentration allows for indirect monitoring of biomass and dissolved oxygen concentrations and consequently obtaining high yield and productivity of biomass. Dynamics analysis of the proposed model is carried out and the existence of order-1 periodic solution is deduced with a formulation of the period, which provides a theoretical possibility to convert the state-dependent control to a periodic one while keeping the dynamics unchanged. Moreover, the stability of the order-1 periodic solution is verified by a geometric method. The stability ensures a certain robustness of the adopted control; that is, even with an inaccurately detected substrate concentration or a deviation, the system will be always stable at the order-1 periodic solution under the control. The simulations are carried out to complement the theoretical results and optimisation of the biomass productivity is presented

Global dynamics of a state-dependent feedback control system

The main purpose is to develop novel analytical techniques and provide a comprehensive qualitative analysis of global dynamics for a state-dependent feedback control system arising from biological applications including integrated pest management. The model considered consists of a planar system of differential equations with state-dependent impulsive control. We characterize the impulsive and phase sets, using the phase portraits of the planar system and the Lambert W function to define the Poincaré map for impulsive point series defined in the phase set. The existence, local and global stability of an order-1 limit cycle and sharp sufficient conditions for the global stability of the boundary order-1 limit cycle have been provided. We further examine the flip bifurcation related to the existence of an order-2 limit cycle. We show that the existence of an order-2 limit cycle implies the existence of an order-1 limit cycle. We derive sufficient conditions under which any trajectory initiating from a phase set will be free from impulsive effects after finite state-dependent feedback control actions, and we also prove that order-k (k ≥ 3) limit cycles do not exist, providing a solution to an open problem in the integrated pest management community. We then investigate multiple attractors and their basins of attraction, as well as the interior structure of a horseshoe-like attractor. We also discuss implications of the global dynamics for integrated pest management strategy. The analytical techniques and qualitative methods developed in the present paper could be widely used in many fields concerning state-dependent feedback control

Dynamics of a Stochastic Functional System for Wastewater Treatment

The dynamics of a delayed stochastic model simulating wastewater treatment process are studied. We assume that there are stochastic fluctuations in the concentrations of the nutrient and microbes around a steady state, and introduce two distributed delays to the model describing, respectively, the times involved in nutrient recycling and the bacterial reproduction response to nutrient uptake. By constructing Lyapunov functionals, sufficient conditions for the stochastic stability of its positive equilibrium are obtained. The combined effects of the stochastic fluctuations and delays are displayed

Periodic Oscillations in a Chemostat Model with Two Discrete Delays

Periodic oscillations of solutions of a chemostat-type model in which a species feeds on a limiting nutrient are considered. The model incorporates two discrete delays representing the lag in nutrient recycling and nutrient conversion. Through the study of characteristic equation associated with the linearized system, a unique positive equilibrium is found and proved to be locally asymptotically stable under some conditions. Meanwhile, a Hopf bifurcation causing periodic solutions is also obtained. Numerical simulations illustrate the theoretical results

Bounded random fluctuations on the input flow in chemostat models with wall growth and non-monotonic kinetics

Dedicated to the memory of María José Garrido Atienza.This paper investigates a chemostat model with wall growth and Haldane consumption kinetics. In addition, bounded random fluctuations on the input flow, which are modeled by means of the well-known Ornstein-Uhlenbeck process, are considered to obtain a much more realistic model fitting in a better way the phenomena observed by practitioners in real devices. Once the existence and uniqueness of global positive solution has been proved, as well as the existence of deterministic absorbing and attracting sets, the random dynamics inside the attracting set is studied in detail to provide conditions under which persistence of species is ensured, the main goal pursued from the practical point of view. Finally, we support the theoretical results with several numerical simulations.Junta de Andalucía P12-FQM-1492Ministerio de Ciencia, Innovación y Universidades (MCIU). España PGC2018-096540-B-I00Junta de Andalucía (Consejería de Economía y Conocimiento) FEDER US-1254251Junta de Andalucía (Consejería de Economía y Conocimiento) P18-FR-450

Threshold Dynamics of a Stochastic Chemostat Model with Two Nutrients and One Microorganism

A new stochastic chemostat model with two substitutable nutrients and one microorganism is proposed and investigated. Firstly, for the corresponding deterministic model, the threshold for extinction and permanence of the microorganism is obtained by analyzing the stability of the equilibria. Then, for the stochastic model, the threshold of the stochastic chemostat for extinction and permanence of the microorganism is explored. Difference of the threshold of the deterministic model and the stochastic model shows that a large stochastic disturbance can affect the persistence of the microorganism and is harmful to the cultivation of the microorganism. To illustrate this phenomenon, we give some computer simulations with different intensity of stochastic noise disturbance

Awakened oscillations in coupled consumer-resource pairs

The paper concerns two interacting consumer-resource pairs based on chemostat-like equations under the assumption that the dynamics of the resource is considerably slower than that of the consumer. The presence of two different time scales enables to carry out a fairly complete analysis of the problem. This is done by treating consumers and resources in the coupled system as fast-scale and slow-scale variables respectively and subsequently considering developments in phase planes of these variables, fast and slow, as if they are independent. When uncoupled, each pair has unique asymptotically stable steady state and no self-sustained oscillatory behavior (although damped oscillations about the equilibrium are admitted). When the consumer-resource pairs are weakly coupled through direct reciprocal inhibition of consumers, the whole system exhibits self-sustained relaxation oscillations with a period that can be significantly longer than intrinsic relaxation time of either pair. It is shown that the model equations adequately describe locally linked consumer-resource systems of quite different nature: living populations under interspecific interference competition and lasers coupled via their cavity losses.Comment: 31 pages, 8 figures 2 tables, 48 reference

Complex dynamics of an impulsive chemostat model

We propose a novel impulsive chemostat model with the substrate concentration as the basis for the implementation of control strategies, and then investigate the model’s global dynamics. The exact domains of the impulsive and phase sets are discussed in the light of phase portraits of the model, and then we define the Poincar´e map and study its complex properties. Furthermore, the existence and stability of the microorganism eradication periodic solution are addressed, and the analysis of a transcritical bifurcation reveals that an order-1 periodic solution is generated. We also provide the conditions for the global stability of an order-1 periodic solution and show the existence of order-k (k ≥ 2) periodic solutions. Moreover, the PRCC results and bifurcation analyses not only substantiate our results, but also indicate that the proposed system exists with complex dynamics. Finally, biological implications related to the theoretical results are discussed