Future of networking is the future of Big Data, The

2019 Summer.Includes bibliographical references.Scientific domains such as Climate Science, High Energy Particle Physics (HEP), Genomics, Biology, and many others are increasingly moving towards data-oriented workflows where each of these communities generates, stores and uses massive datasets that reach into terabytes and petabytes, and projected soon to reach exabytes. These communities are also increasingly moving towards a global collaborative model where scientists routinely exchange a significant amount of data. The sheer volume of data and associated complexities associated with maintaining, transferring, and using them, continue to push the limits of the current technologies in multiple dimensions - storage, analysis, networking, and security. This thesis tackles the networking aspect of big-data science. Networking is the glue that binds all the components of modern scientific workflows, and these communities are becoming increasingly dependent on high-speed, highly reliable networks. The network, as the common layer across big-science communities, provides an ideal place for implementing common services. Big-science applications also need to work closely with the network to ensure optimal usage of resources, intelligent routing of requests, and data. Finally, as more communities move towards data-intensive, connected workflows - adopting a service model where the network provides some of the common services reduces not only application complexity but also the necessity of duplicate implementations. Named Data Networking (NDN) is a new network architecture whose service model aligns better with the needs of these data-oriented applications. NDN's name based paradigm makes it easier to provide intelligent features at the network layer rather than at the application layer. This thesis shows that NDN can push several standard features to the network. This work is the first attempt to apply NDN in the context of large scientific data; in the process, this thesis touches upon scientific data naming, name discovery, real-world deployment of NDN for scientific data, feasibility studies, and the designs of in-network protocols for big-data science

Named Data Networking based File Access for XRootD

We present the design and implementation of a Named Data Networking (NDN) based Open Storage System plug-in for XRootD. This is an important step towards integrating NDN, a leading future internet architecture, with the existing data management systems in CMS. This work outlines the first results of data transfer tests using internal as well as external 100 Gbps testbeds, and compares the NDN-based implementation with existing solutions

Computing models in high energy physics

Abstract High Energy Physics Experiments (HEP experiments in the following) have been at least in the last 3 decades at the forefront of technology, in aspects like detector design and construction, number of collaborators, and complexity of data analyses. As uncommon in previous particle physics experiments, the computing and data handling aspects have not been marginal in their design and operations; the cost of the IT related components, from software development to storage systems and to distributed complex e-Infrastructures, has raised to a level which needs proper understanding and planning from the first moments in the lifetime of an experiment. In the following sections we will first try to explore the computing and software solutions developed and operated in the most relevant past and present experiments, with a focus on the technologies deployed; a technology tracking section is presented in order to pave the way to possible solutions for next decade experiments, and beyond. While the focus of this review is on offline computing model, the distinction is a shady one, and some experiments have already experienced contaminations between triggers selection and offline workflows; it is anticipated the trend will continue in the future

Data Provenance and Management in Radio Astronomy: A Stream Computing Approach

New approaches for data provenance and data management (DPDM) are required for mega science projects like the Square Kilometer Array, characterized by extremely large data volume and intense data rates, therefore demanding innovative and highly efficient computational paradigms. In this context, we explore a stream-computing approach with the emphasis on the use of accelerators. In particular, we make use of a new generation of high performance stream-based parallelization middleware known as InfoSphere Streams. Its viability for managing and ensuring interoperability and integrity of signal processing data pipelines is demonstrated in radio astronomy. IBM InfoSphere Streams embraces the stream-computing paradigm. It is a shift from conventional data mining techniques (involving analysis of existing data from databases) towards real-time analytic processing. We discuss using InfoSphere Streams for effective DPDM in radio astronomy and propose a way in which InfoSphere Streams can be utilized for large antennae arrays. We present a case-study: the InfoSphere Streams implementation of an autocorrelating spectrometer, and using this example we discuss the advantages of the stream-computing approach and the utilization of hardware accelerators

Large Scale In Silico Screening on Grid Infrastructures

Large-scale grid infrastructures for in silico drug discovery open opportunities of particular interest to neglected and emerging diseases. In 2005 and 2006, we have been able to deploy large scale in silico docking within the framework of the WISDOM initiative against Malaria and Avian Flu requiring about 105 years of CPU on the EGEE, Auvergrid and TWGrid infrastructures. These achievements demonstrated the relevance of large-scale grid infrastructures for the virtual screening by molecular docking. This also allowed evaluating the performances of the grid infrastructures and to identify specific issues raised by large-scale deployment.Comment: 14 pages, 2 figures, 2 tables, The Third International Life Science Grid Workshop, LSGrid 2006, Yokohama, Japan, 13-14 october 2006, to appear in the proceeding

A survey on cost-effective context-aware distribution of social data streams over energy-efficient data centres

Social media have emerged in the last decade as a viable and ubiquitous means of communication. The ease of user content generation within these platforms, e.g. check-in information, multimedia data, etc., along with the proliferation of Global Positioning System (GPS)-enabled, always-connected capture devices lead to data streams of unprecedented amount and a radical change in information sharing. Social data streams raise a variety of practical challenges, including derivation of real-time meaningful insights from effectively gathered social information, as well as a paradigm shift for content distribution with the leverage of contextual data associated with user preferences, geographical characteristics and devices in general. In this article we present a comprehensive survey that outlines the state-of-the-art situation and organizes challenges concerning social media streams and the infrastructure of the data centres supporting the efficient access to data streams in terms of content distribution, data diffusion, data replication, energy efficiency and network infrastructure. We systematize the existing literature and proceed to identify and analyse the main research points and industrial efforts in the area as far as modelling, simulation and performance evaluation are concerned