45,115 research outputs found
Detecting and Estimating Signals over Noisy and Unreliable Synapses: Information-Theoretic Analysis
The temporal precision with which neurons respond to synaptic inputs has a direct bearing on the nature of the neural code. A characterization of the neuronal noise sources associated with different sub-cellular components (synapse, dendrite, soma, axon, and so on) is needed to understand the relationship between noise and information transfer. Here we study the effect of the unreliable, probabilistic nature of synaptic transmission on information transfer in the absence of interaction among presynaptic inputs. We derive theoretical lower bounds on the capacity of a simple model of a cortical synapse under two different paradigms. In signal estimation, the signal is assumed to be encoded in the mean firing rate of the presynaptic neuron, and the objective is to estimate the continuous input signal from the postsynaptic voltage. In signal detection, the input is binary, and the presence or absence of a presynaptic action potential is to be detected from the postsynaptic voltage. The efficacy of information transfer in synaptic transmission is characterized by deriving optimal strategies under these two paradigms. On the basis of parameter values derived from neocortex, we find that single cortical synapses cannot transmit information reliably, but redundancy obtained using a small number of multiple synapses leads to a significant improvement in the information capacity of synaptic transmission
Neutral coding - A report based on an NRP work session
Neural coding by impulses and trains on single and multiple channels, and representation of information in nonimpulse carrier
I, NEURON: the neuron as the collective
Purpose â In the last half-century, individual sensory neurons have been bestowed with characteristics of the whole human being, such as behavior and its oft-presumed precursor, consciousness. This anthropomorphization is pervasive in the literature. It is also absurd, given what we know about neurons, and it needs to be abolished. This study aims to first understand how it happened, and hence why it persists.
Design/methodology/approach â The peer-reviewed sensory-neurophysiology literature extends to hundreds (perhaps thousands) of papers. Here, more than 90 mainstream papers were scrutinized.
Findings â Anthropomorphization arose because single neurons were cast as âobserversâ who âidentifyâ, âcategorizeâ, ârecognizeâ, âdistinguishâ or âdiscriminateâ the stimuli, using math-based algorithms that reduce (âdecodeâ) the stimulus-evoked spike trains to the particular stimuli inferred to elicit them. Without âdecodingâ, there is supposedly no perception. However, âdecodingâ is both unnecessary and unconfirmed. The neuronal âobserverâ in fact consists of the laboratory staff and the greater society that supports them. In anthropomorphization, the neuron becomes the collective.
Research limitations/implications â Anthropomorphization underlies the widespread application to neurons Information Theory and Signal Detection Theory, making both approaches incorrect.
Practical implications â A great deal of time, money and effort has been wasted on anthropomorphic Reductionist approaches to understanding perception and consciousness. Those resources should be diverted into more-fruitful approaches.
Originality/value â A long-overdue scrutiny of sensory-neuroscience literature reveals that anthropomorphization, a form of Reductionism that involves the presumption of single-neuron consciousness, has run amok in neuroscience. Consciousness is more likely to be an emergent property of the brain
Feature detection using spikes: the greedy approach
A goal of low-level neural processes is to build an efficient code extracting
the relevant information from the sensory input. It is believed that this is
implemented in cortical areas by elementary inferential computations
dynamically extracting the most likely parameters corresponding to the sensory
signal. We explore here a neuro-mimetic feed-forward model of the primary
visual area (VI) solving this problem in the case where the signal may be
described by a robust linear generative model. This model uses an over-complete
dictionary of primitives which provides a distributed probabilistic
representation of input features. Relying on an efficiency criterion, we derive
an algorithm as an approximate solution which uses incremental greedy inference
processes. This algorithm is similar to 'Matching Pursuit' and mimics the
parallel architecture of neural computations. We propose here a simple
implementation using a network of spiking integrate-and-fire neurons which
communicate using lateral interactions. Numerical simulations show that this
Sparse Spike Coding strategy provides an efficient model for representing
visual data from a set of natural images. Even though it is simplistic, this
transformation of spatial data into a spatio-temporal pattern of binary events
provides an accurate description of some complex neural patterns observed in
the spiking activity of biological neural networks.Comment: This work links Matching Pursuit with bayesian inference by providing
the underlying hypotheses (linear model, uniform prior, gaussian noise
model). A parallel with the parallel and event-based nature of neural
computations is explored and we show application to modelling Primary Visual
Cortex / image processsing.
http://incm.cnrs-mrs.fr/perrinet/dynn/LaurentPerrinet/Publications/Perrinet04tau
Two-photon imaging and analysis of neural network dynamics
The glow of a starry night sky, the smell of a freshly brewed cup of coffee
or the sound of ocean waves breaking on the beach are representations of the
physical world that have been created by the dynamic interactions of thousands
of neurons in our brains. How the brain mediates perceptions, creates thoughts,
stores memories and initiates actions remains one of the most profound puzzles
in biology, if not all of science. A key to a mechanistic understanding of how
the nervous system works is the ability to analyze the dynamics of neuronal
networks in the living organism in the context of sensory stimulation and
behaviour. Dynamic brain properties have been fairly well characterized on the
microscopic level of individual neurons and on the macroscopic level of whole
brain areas largely with the help of various electrophysiological techniques.
However, our understanding of the mesoscopic level comprising local populations
of hundreds to thousands of neurons (so called 'microcircuits') remains
comparably poor. In large parts, this has been due to the technical
difficulties involved in recording from large networks of neurons with
single-cell spatial resolution and near- millisecond temporal resolution in the
brain of living animals. In recent years, two-photon microscopy has emerged as
a technique which meets many of these requirements and thus has become the
method of choice for the interrogation of local neural circuits. Here, we
review the state-of-research in the field of two-photon imaging of neuronal
populations, covering the topics of microscope technology, suitable fluorescent
indicator dyes, staining techniques, and in particular analysis techniques for
extracting relevant information from the fluorescence data. We expect that
functional analysis of neural networks using two-photon imaging will help to
decipher fundamental operational principles of neural microcircuits.Comment: 36 pages, 4 figures, accepted for publication in Reports on Progress
in Physic
Dynamical principles in neuroscience
Dynamical modeling of neural systems and brain functions has a history of success over the last half century. This includes, for example, the explanation and prediction of some features of neural rhythmic behaviors. Many interesting dynamical models of learning and memory based on physiological experiments have been suggested over the last two decades. Dynamical models even of consciousness now exist. Usually these models and results are based on traditional approaches and paradigms of nonlinear dynamics including dynamical chaos. Neural systems are, however, an unusual subject for nonlinear dynamics for several reasons: (i) Even the simplest neural network, with only a few neurons and synaptic connections, has an enormous number of variables and control parameters. These make neural systems adaptive and flexible, and are critical to their biological function. (ii) In contrast to traditional physical systems described by well-known basic principles, first principles governing the dynamics of neural systems are unknown. (iii) Many different neural systems exhibit similar dynamics despite having different architectures and different levels of complexity. (iv) The network architecture and connection strengths are usually not known in detail and therefore the dynamical analysis must, in some sense, be probabilistic. (v) Since nervous systems are able to organize behavior based on sensory inputs, the dynamical modeling of these systems has to explain the transformation of temporal information into combinatorial or combinatorial-temporal codes, and vice versa, for memory and recognition. In this review these problems are discussed in the context of addressing the stimulating questions: What can neuroscience learn from nonlinear dynamics, and what can nonlinear dynamics learn from neuroscience?This work was supported by NSF Grant No. NSF/EIA-0130708, and Grant No. PHY 0414174; NIH Grant No. 1 R01 NS50945 and Grant No. NS40110; MEC BFI2003-07276, and FundaciĂłn BBVA
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