Empowering parallel computing with field programmable gate arrays

After more than 30 years, reconfigurable computing has grown from a concept to a mature field of science and technology. The cornerstone of this evolution is the field programmable gate array, a building block enabling the configuration of a custom hardware architecture. The departure from static von Neumannlike architectures opens the way to eliminate the instruction overhead and to optimize the execution speed and power consumption. FPGAs now live in a growing ecosystem of development tools, enabling software programmers to map algorithms directly onto hardware. Applications abound in many directions, including data centers, IoT, AI, image processing and space exploration. The increasing success of FPGAs is largely due to an improved toolchain with solid high-level synthesis support as well as a better integration with processor and memory systems. On the other hand, long compile times and complex design exploration remain areas for improvement. In this paper we address the evolution of FPGAs towards advanced multi-functional accelerators, discuss different programming models and their HLS language implementations, as well as high-performance tuning of FPGAs integrated into a heterogeneous platform. We pinpoint fallacies and pitfalls, and identify opportunities for language enhancements and architectural refinements

Heterogeneity-aware scheduling and data partitioning for system performance acceleration

Over the past decade, heterogeneous processors and accelerators have become increasingly prevalent in modern computing systems. Compared with previous homogeneous parallel machines, the hardware heterogeneity in modern systems provides new opportunities and challenges for performance acceleration. Classic operating systems optimisation problems such as task scheduling, and application-specific optimisation techniques such as the adaptive data partitioning of parallel algorithms, are both required to work together to address hardware heterogeneity. Significant effort has been invested in this problem, but either focuses on a specific type of heterogeneous systems or algorithm, or a high-level framework without insight into the difference in heterogeneity between different types of system. A general software framework is required, which can not only be adapted to multiple types of systems and workloads, but is also equipped with the techniques to address a variety of hardware heterogeneity. This thesis presents approaches to design general heterogeneity-aware software frameworks for system performance acceleration. It covers a wide variety of systems, including an OS scheduler targeting on-chip asymmetric multi-core processors (AMPs) on mobile devices, a hierarchical many-core supercomputer and multi-FPGA systems for high performance computing (HPC) centers. Considering heterogeneity from on-chip AMPs, such as thread criticality, core sensitivity, and relative fairness, it suggests a collaborative based approach to co-design the task selector and core allocator on OS scheduler. Considering the typical sources of heterogeneity in HPC systems, such as the memory hierarchy, bandwidth limitations and asymmetric physical connection, it proposes an application-specific automatic data partitioning method for a modern supercomputer, and a topological-ranking heuristic based schedule for a multi-FPGA based reconfigurable cluster. Experiments on both a full system simulator (GEM5) and real systems (Sunway Taihulight Supercomputer and Xilinx Multi-FPGA based clusters) demonstrate the significant advantages of the suggested approaches compared against the state-of-the-art on variety of workloads."This work is supported by St Leonards 7th Century Scholarship and Computer Science PhD funding from University of St Andrews; by UK EPSRC grant Discovery: Pattern Discovery and Program Shaping for Manycore Systems (EP/P020631/1)." -- Acknowledgement

CUsched: multiprogrammed workload scheduling on GPU architectures

Graphic Processing Units (GPUs) are currently widely used in High Performance Computing (HPC) applications to speed-up the execution of massively-parallel codes. GPUs are well-suited for such HPC environments because applications share a common characteristic with the gaming codes GPUs were designed for: only one application is using the GPU at the same time. Although, minimal support for multi-programmed systems exist, modern GPUs do not allow resource sharing among different processes. This lack of support restricts the usage of GPUs in desktop and mobile environment to a small amount of applications (e.g., games and multimedia players). In this paper we study the multi-programming support available in current GPUs, and show how such support is not sufficient. We propose a set of hardware extensions to the current GPU architectures to efficiently support multi-programmed GPU workloads, allowing concurrent execution of codes from different user processes. We implement several hardware schedulers on top of these extensions and analyze the behaviour of different work scheduling algorithms using system wide and per process metrics.Postprint (published version

Adaptive Resource Management Techniques for High Performance Multi-Core Architectures

Reducing the average memory access time is crucial for improving the performance of applications executing on multi-core architectures. With workload consolidation this becomes increasingly challenging due to shared resource contention. Previous works has proposed techniques for partitioning of shared resources (e.g. cache and bandwidth) and prefetch throttling with the goal of mitigating contention and reducing or hiding average memory access time.Cache partitioning in multi-core architectures is challenging due to the need to determine cache allocations with low computational overhead and the need to place the partitions in a locality-aware manner. The requirement for low computational overhead is important in order to have the capability to scale to large core counts. Previous work within multi-resource management has proposed coordinately managing a subset of the techniques: cache partitioning, bandwidth partitioning and prefetch throttling. However, coordinated management of all three techniques opens up new possible trade-offs and interactions which can be leveraged to gain better performance. This thesis contributes with two different resource management techniques: One resource manger for scalable cache partitioning and a multi-resource management technique for coordinated management of cache partitioning, bandwidth partitioning and prefetching. The scalable resource management technique for cache partitioning uses a distributed and asynchronous cache partitioning algorithm that works together with a flexible NUCA enforcement mechanism in order to give locality-aware placement of data and support fine-grained partitions. The algorithm adapts quickly to application phase changes. The distributed nature of the algorithm together with the low computational complexity, enables the solution to be implemented in hardware and scale to large core counts. The multi-resource management technique for coordinated management of cache partitioning bandwidth partitioning and prefetching is designed using the results from our in-depth characterisation from the entire SPEC CPU2006 suite. The solution consists of three local resource management techniques that together with a coordination mechanism provides allocations which takes the inter-resource interactions and trade-offs into account.Our evaluation shows that the distributed cache partitioning solution performs within 1% from the best known centralized solution, which cannot scale to large core counts. The solution improves performance by 9% and 16%, on average, on a 16 and 64-core multi-core architecture, respectively, compared to a shared last-level cache. The multi-resource management technique gives a performance increase of 11%, on average, over state-of-the-art and improves performance by 50% compared to the baseline 16-core multi-core without cache partitioning, bandwidth partitioning and prefetch throttling

Building Efficient Query Engines in a High-Level Language

Abstraction without regret refers to the vision of using high-level programming languages for systems development without experiencing a negative impact on performance. A database system designed according to this vision offers both increased productivity and high performance, instead of sacrificing the former for the latter as is the case with existing, monolithic implementations that are hard to maintain and extend. In this article, we realize this vision in the domain of analytical query processing. We present LegoBase, a query engine written in the high-level language Scala. The key technique to regain efficiency is to apply generative programming: LegoBase performs source-to-source compilation and optimizes the entire query engine by converting the high-level Scala code to specialized, low-level C code. We show how generative programming allows to easily implement a wide spectrum of optimizations, such as introducing data partitioning or switching from a row to a column data layout, which are difficult to achieve with existing low-level query compilers that handle only queries. We demonstrate that sufficiently powerful abstractions are essential for dealing with the complexity of the optimization effort, shielding developers from compiler internals and decoupling individual optimizations from each other. We evaluate our approach with the TPC-H benchmark and show that: (a) With all optimizations enabled, LegoBase significantly outperforms a commercial database and an existing query compiler. (b) Programmers need to provide just a few hundred lines of high-level code for implementing the optimizations, instead of complicated low-level code that is required by existing query compilation approaches. (c) The compilation overhead is low compared to the overall execution time, thus making our approach usable in practice for compiling query engines

Adaptive Microarchitectural Optimizations to Improve Performance and Security of Multi-Core Architectures

With the current technological barriers, microarchitectural optimizations are increasingly important to ensure performance scalability of computing systems. The shift to multi-core architectures increases the demands on the memory system, and amplifies the role of microarchitectural optimizations in performance improvement. In a multi-core system, microarchitectural resources are usually shared, such as the cache, to maximize utilization but sharing can also lead to contention and lower performance. This can be mitigated through partitioning of shared caches.However, microarchitectural optimizations which were assumed to be fundamentally secure for a long time, can be used in side-channel attacks to exploit secrets, as cryptographic keys. Timing-based side-channels exploit predictable timing variations due to the interaction with microarchitectural optimizations during program execution. Going forward, there is a strong need to be able to leverage microarchitectural optimizations for performance without compromising security. This thesis contributes with three adaptive microarchitectural resource management optimizations to improve security and/or\ua0performance\ua0of multi-core architectures\ua0and a systematization-of-knowledge of timing-based side-channel attacks.\ua0We observe that to achieve high-performance cache partitioning in a multi-core system\ua0three requirements need to be met: i) fine-granularity of partitions, ii) locality-aware placement and iii) frequent changes. These requirements lead to\ua0high overheads for current centralized partitioning solutions, especially as the number of cores in the\ua0system increases. To address this problem, we present an adaptive and scalable cache partitioning solution (DELTA) using a distributed and asynchronous allocation algorithm. The\ua0allocations occur through core-to-core challenges, where applications with larger performance benefit will gain cache capacity. The\ua0solution is implementable in hardware, due to low computational complexity, and can scale to large core counts.According to our analysis, better performance can be achieved by coordination of multiple optimizations for different resources, e.g., off-chip bandwidth and cache, but is challenging due to the increased number of possible allocations which need to be evaluated.\ua0Based on these observations, we present a solution (CBP) for coordinated management of the optimizations: cache partitioning, bandwidth partitioning and prefetching.\ua0Efficient allocations, considering the inter-resource interactions and trade-offs, are achieved using local resource managers to limit the solution space.The continuously growing number of\ua0side-channel attacks leveraging\ua0microarchitectural optimizations prompts us to review attacks and defenses to understand the vulnerabilities of different microarchitectural optimizations. We identify the four root causes of timing-based side-channel attacks: determinism, sharing, access violation\ua0and information flow.\ua0Our key insight is that eliminating any of the exploited root causes, in any of the attack steps, is enough to provide protection.\ua0Based on our framework, we present a systematization of the attacks and defenses on a wide range of microarchitectural optimizations, which highlights their key similarities.\ua0Shared caches are an attractive attack surface for side-channel attacks, while defenses need to be efficient since the cache is crucial for performance.\ua0To address this issue, we present an adaptive and scalable cache partitioning solution (SCALE) for protection against cache side-channel attacks. The solution leverages randomness,\ua0and provides quantifiable and information theoretic security guarantees using differential privacy. The solution closes the performance gap to a state-of-the-art non-secure allocation policy for a mix of secure and non-secure applications

Parallel Computation in Econometrics: A Simplified Approach

Parallel computation has a long history in econometric computing, but is not at all wide spread. We believe that a major impediment is the labour cost of coding for parallel architectures. Moreover, programs for specific hardware often become obsolete quite quickly. Our approach is to take a popular matrix programming language (Ox), and implement a message-passing interface using MPI. Next, object-oriented programming allows us to hide the specific parallelization code, so that a program does not need to be rewritten when it is ported from the desktop to a distributed network of computers. Our focus is on so-called embarrassingly parallel computations, and we address the issue of parallel random number generation.Code optimization; Econometrics; High-performance computing; Matrix-programming language; Monte Carlo; MPI; Ox; Parallel computing; Random number generation.

Effective Cache Apportioning for Performance Isolation Under Compiler Guidance

With a growing number of cores in modern high-performance servers, effective sharing of the last level cache (LLC) is more critical than ever. The primary agenda of such systems is to maximize performance by efficiently supporting multi-tenancy of diverse workloads. However, this could be particularly challenging to achieve in practice, because modern workloads exhibit dynamic phase behaviour, which causes their cache requirements & sensitivities to vary at finer granularities during execution. Unfortunately, existing systems are oblivious to the application phase behavior, and are unable to detect and react quickly enough to these rapidly changing cache requirements, often incurring significant performance degradation. In this paper, we propose Com-CAS, a new apportioning system that provides dynamic cache allocations for co-executing applications. Com-CAS differs from the existing cache partitioning systems by adapting to the dynamic cache requirements of applications just-in-time, as opposed to reacting, without any hardware modifications. The front-end of Com-CAS consists of compiler-analysis equipped with machine learning mechanisms to predict cache requirements, while the back-end consists of proactive scheduler that dynamically apportions LLC amongst co-executing applications leveraging Intel Cache Allocation Technology (CAT). Com-CAS's partitioning scheme utilizes the compiler-generated information across finer granularities to predict the rapidly changing dynamic application behaviors, while simultaneously maintaining data locality. Our experiments show that Com-CAS improves average weighted throughput by 15% over unpartitioned cache system, and outperforms state-of-the-art partitioning system KPart by 20%, while maintaining the worst individual application completion time degradation to meet various Service-Level Agreement (SLA) requirements