10,263 research outputs found

    Oxysterols as drivers of inflammatory diseases

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    Computing Interpretable Representations of Cell Morphodynamics

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    Shape changes (morphodynamics) are one of the principal ways cells interact with their environments and perform key intrinsic behaviours like division. These dynamics arise from a myriad of complex signalling pathways that often organise with emergent simplicity to carry out critical functions including predation, collaboration and migration. A powerful method for analysis can therefore be to quantify this emergent structure, bypassing the low-level complexity. Enormous image datasets are now available to mine. However, it can be difficult to uncover interpretable representations of the global organisation of these heterogeneous dynamic processes. Here, such representations were developed for interpreting morphodynamics in two key areas: mode of action (MoA) comparison for drug discovery (developed using the economically devastating Asian soybean rust crop pathogen) and 3D migration of immune system T cells through extracellular matrices (ECMs). For MoA comparison, population development over a 2D space of shapes (morphospace) was described using two models with condition-dependent parameters: a top-down model of diffusive development over Waddington-type landscapes, and a bottom-up model of tip growth. A variety of landscapes were discovered, describing phenotype transitions during growth, and possible perturbations in the tip growth machinery that cause this variation were identified. For interpreting T cell migration, a new 3D shape descriptor that incorporates key polarisation information was developed, revealing low-dimensionality of shape, and the distinct morphodynamics of run-and-stop modes that emerge at minute timescales were mapped. Periodically oscillating morphodynamics that include retrograde deformation flows were found to underlie active translocation (run mode). Overall, it was found that highly interpretable representations could be uncovered while still leveraging the enormous discovery power of deep learning algorithms. The results show that whole-cell morphodynamics can be a convenient and powerful place to search for structure, with potentially life-saving applications in medicine and biocide discovery as well as immunotherapeutics.Open Acces

    Special Topics in Information Technology

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    This open access book presents thirteen outstanding doctoral dissertations in Information Technology from the Department of Electronics, Information and Bioengineering, Politecnico di Milano, Italy. Information Technology has always been highly interdisciplinary, as many aspects have to be considered in IT systems. The doctoral studies program in IT at Politecnico di Milano emphasizes this interdisciplinary nature, which is becoming more and more important in recent technological advances, in collaborative projects, and in the education of young researchers. Accordingly, the focus of advanced research is on pursuing a rigorous approach to specific research topics starting from a broad background in various areas of Information Technology, especially Computer Science and Engineering, Electronics, Systems and Control, and Telecommunications. Each year, more than 50 PhDs graduate from the program. This book gathers the outcomes of the thirteen best theses defended in 2020-21 and selected for the IT PhD Award. Each of the authors provides a chapter summarizing his/her findings, including an introduction, description of methods, main achievements and future work on the topic. Hence, the book provides a cutting-edge overview of the latest research trends in Information Technology at Politecnico di Milano, presented in an easy-to-read format that will also appeal to non-specialists

    Recent Advances in Single-Particle Tracking: Experiment and Analysis

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    This Special Issue of Entropy, titled “Recent Advances in Single-Particle Tracking: Experiment and Analysis”, contains a collection of 13 papers concerning different aspects of single-particle tracking, a popular experimental technique that has deeply penetrated molecular biology and statistical and chemical physics. Presenting original research, yet written in an accessible style, this collection will be useful for both newcomers to the field and more experienced researchers looking for some reference. Several papers are written by authorities in the field, and the topics cover aspects of experimental setups, analytical methods of tracking data analysis, a machine learning approach to data and, finally, some more general issues related to diffusion

    Sustainability Analysis and Environmental Decision-Making Using Simulation, Optimization, and Computational Analytics

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    Effective environmental decision-making is often challenging and complex, where final solutions frequently possess inherently subjective political and socio-economic components. Consequently, complex sustainability applications in the “real world” frequently employ computational decision-making approaches to construct solutions to problems containing numerous quantitative dimensions and considerable sources of uncertainty. This volume includes a number of such applied computational analytics papers that either create new decision-making methods or provide innovative implementations of existing methods for addressing a wide spectrum of sustainability applications, broadly defined. The disparate contributions all emphasize novel approaches of computational analytics as applied to environmental decision-making and sustainability analysis – be this on the side of optimization, simulation, modelling, computational solution procedures, visual analytics, and/or information technologies

    The Anthropocene Hypothesis

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    Biofuels Production and Processing Technology

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    The negative impacts of global warming and global environmental pollution due to fossil fuels mean that the main challenge of modern society is finding alternatives to conventional fuels. In this scenario, biofuels derived from renewable biomass represent the most promising renewable energy sources. Depending on the biomass used by the fermentation technologies, it is possible to obtain first-generation biofuels produced from food crops, second-generation biofuels produced from non-food feedstock, mainly starting from renewable lignocellulosic biomasses, and third-generation biofuels, represented by algae or food waste biomass.Although biofuels appear to be the closest alternative to fossil fuels, it is necessary for them to be produced in competitive quantities and costs, requiring both improvements to production technologies and the diversification of feedstock. This Special Issue is focused on technological innovations, including the utilization of different feedstocks, with a particular focus on biethanol production from food waste; different biomass pretreatments; fermentation strategies, such as simultaneous saccharification and fermentation (SSF) or separate hydrolysis and fermentation (SHF); different applied microorganisms used as a monoculture or co-culture; and different setups for biofuel fermentation processes.The manuscripts collected represent a great opportunity for adding new knowledge to the scientific community as well as industry

    Advanced Modeling and Research in Hybrid Microgrid Control and Optimization

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    This book presents the latest solutions in fuel cell (FC) and renewable energy implementation in mobile and stationary applications. The implementation of advanced energy management and optimization strategies are detailed for fuel cell and renewable microgrids, and for the multi-FC stack architecture of FC/electric vehicles to enhance the reliability of these systems and to reduce the costs related to energy production and maintenance. Cyber-security methods based on blockchain technology to increase the resilience of FC renewable hybrid microgrids are also presented. Therefore, this book is for all readers interested in these challenging directions of research

    Molecular Pathways in Cancers

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    This book includes some recent works providing the readers with novel relevant findings about the main signaling pathways that govern the molecular pathogenesis of some of the highest prevalent human tumors, which are the basis for developing alternative therapeutic strategies to improve patient outcomes
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