Semantic Segmentation of Pathological Lung Tissue with Dilated Fully Convolutional Networks

Early and accurate diagnosis of interstitial lung diseases (ILDs) is crucial for making treatment decisions, but can be challenging even for experienced radiologists. The diagnostic procedure is based on the detection and recognition of the different ILD pathologies in thoracic CT scans, yet their manifestation often appears similar. In this study, we propose the use of a deep purely convolutional neural network for the semantic segmentation of ILD patterns, as the basic component of a computer aided diagnosis (CAD) system for ILDs. The proposed CNN, which consists of convolutional layers with dilated filters, takes as input a lung CT image of arbitrary size and outputs the corresponding label map. We trained and tested the network on a dataset of 172 sparsely annotated CT scans, within a cross-validation scheme. The training was performed in an end-to-end and semi-supervised fashion, utilizing both labeled and non-labeled image regions. The experimental results show significant performance improvement with respect to the state of the art

Comparison of Classical Computer Vision vs. Convolutional Neural Networks for Weed Mapping in Aerial Images

In this paper, we present a comparison between convolutional neural networks and classicalcomputer vision approaches, for the specific precision agriculture problem of weed mapping on sugarcane fields aerial images. A systematic literature review was conducted to find which computer vision methods are being used on this specific problem. The most cited methods were implemented, as well as four models of convolutional neural networks. All implemented approaches were tested using the same dataset, and their results were quantitatively and qualitatively analyzed. The obtained results were compared to a human expert made ground truth, for validation. The results indicate that the convolutional neural networks present better precision and generalize better than the classical model

Dense semantic labeling of sub-decimeter resolution images with convolutional neural networks

Semantic labeling (or pixel-level land-cover classification) in ultra-high resolution imagery (< 10cm) requires statistical models able to learn high level concepts from spatial data, with large appearance variations. Convolutional Neural Networks (CNNs) achieve this goal by learning discriminatively a hierarchy of representations of increasing abstraction. In this paper we present a CNN-based system relying on an downsample-then-upsample architecture. Specifically, it first learns a rough spatial map of high-level representations by means of convolutions and then learns to upsample them back to the original resolution by deconvolutions. By doing so, the CNN learns to densely label every pixel at the original resolution of the image. This results in many advantages, including i) state-of-the-art numerical accuracy, ii) improved geometric accuracy of predictions and iii) high efficiency at inference time. We test the proposed system on the Vaihingen and Potsdam sub-decimeter resolution datasets, involving semantic labeling of aerial images of 9cm and 5cm resolution, respectively. These datasets are composed by many large and fully annotated tiles allowing an unbiased evaluation of models making use of spatial information. We do so by comparing two standard CNN architectures to the proposed one: standard patch classification, prediction of local label patches by employing only convolutions and full patch labeling by employing deconvolutions. All the systems compare favorably or outperform a state-of-the-art baseline relying on superpixels and powerful appearance descriptors. The proposed full patch labeling CNN outperforms these models by a large margin, also showing a very appealing inference time.Comment: Accepted in IEEE Transactions on Geoscience and Remote Sensing, 201