Mining Software Repositories to Assist Developers and Support Managers

This thesis explores mining the evolutionary history of a software system to support software developers and managers in their endeavors to build and maintain complex software systems. We introduce the idea of evolutionary extractors which are specialized extractors that can recover the history of software projects from software repositories, such as source control systems. The challenges faced in building C-REX, an evolutionary extractor for the C programming language, are discussed. We examine the use of source control systems in industry and the quality of the recovered C-REX data through a survey of several software practitioners. Using the data recovered by C-REX, we develop several approaches and techniques to assist developers and managers in their activities. We propose Source Sticky Notes to assist developers in understanding legacy software systems by attaching historical information to the dependency graph. We present the Development Replay approach to estimate the benefits of adopting new software maintenance tools by reenacting the development history. We propose the Top Ten List which assists managers in allocating testing resources to the subsystems that are most susceptible to have faults. To assist managers in improving the quality of their projects, we present a complexity metric which quantifies the complexity of the changes to the code instead of quantifying the complexity of the source code itself. All presented approaches are validated empirically using data from several large open source systems. The presented work highlights the benefits of transforming software repositories from static record keeping repositories to active repositories used by researchers to gain empirically based understanding of software development, and by software practitioners to predict, plan and understand various aspects of their project

Open Source Software Evolution and Its Dynamics

This thesis undertakes an empirical study of software evolution by analyzing open source software (OSS) systems. The main purpose is to aid in understanding OSS evolution. The work centers on collecting large quantities of structural data cost-effectively and analyzing such data to understand software evolution dynamics (the mechanisms and causes of change or growth). We propose a multipurpose systematic approach to extracting program facts (e. g. , function calls). This approach is supported by a suite of C and C++ program extractors, which cover different steps in the program build process and handle both source and binary code. We present several heuristics to link facts extracted from individual files into a combined system model of reasonable accuracy. We extract historical sequences of system models to aid software evolution analysis. We propose that software evolution can be viewed as Punctuated Equilibrium (i. e. , long periods of small changes interrupted occasionally by large avalanche changes). We develop two approaches to study such dynamical behavior. One approach uses the evolution spectrograph to visualize file level changes to the implemented system structure. The other approach relies on automated software clustering techniques to recover system design changes. We discuss lessons learned from using these approaches. We present a new perspective on software evolution dynamics. From this perspective, an evolving software system responds to external events (e. g. , new functional requirements) according to Self-Organized Criticality (SOC). The SOC dynamics is characterized by the following: (1) the probability distribution of change sizes is a power law; and (2) the time series of change exhibits long range correlations with power law behavior. We present empirical evidence that SOC occurs in open source software systems

Some issues in the 'archaeology' of software evolution

During a software project's lifetime, the software goes through many changes, as components are added, removed and modified to fix bugs and add new features. This paper is intended as a lightweight introduction to some of the issues arising from an `archaeological' investigation of software evolution. We use our own work to look at some of the challenges faced, techniques used, findings obtained, and lessons learnt when measuring and visualising the historical changes that happen during the evolution of software

Some issues in the 'archaeology' of software evolution

During a software project's lifetime, the software goes through many changes, as components are added, removed and modified to fix bugs and add new features. This paper is intended as a lightweight introduction to some of the issues arising from an `archaeological' investigation of software evolution. We use our own work to look at some of the challenges faced, techniques used, findings obtained, and lessons learnt when measuring and visualising the historical changes that happen during the evolution of software

Is "Better Data" Better than "Better Data Miners"? (On the Benefits of Tuning SMOTE for Defect Prediction)

We report and fix an important systematic error in prior studies that ranked classifiers for software analytics. Those studies did not (a) assess classifiers on multiple criteria and they did not (b) study how variations in the data affect the results. Hence, this paper applies (a) multi-criteria tests while (b) fixing the weaker regions of the training data (using SMOTUNED, which is a self-tuning version of SMOTE). This approach leads to dramatically large increases in software defect predictions. When applied in a 5*5 cross-validation study for 3,681 JAVA classes (containing over a million lines of code) from open source systems, SMOTUNED increased AUC and recall by 60% and 20% respectively. These improvements are independent of the classifier used to predict for quality. Same kind of pattern (improvement) was observed when a comparative analysis of SMOTE and SMOTUNED was done against the most recent class imbalance technique. In conclusion, for software analytic tasks like defect prediction, (1) data pre-processing can be more important than classifier choice, (2) ranking studies are incomplete without such pre-processing, and (3) SMOTUNED is a promising candidate for pre-processing.Comment: 10 pages + 2 references. Accepted to International Conference of Software Engineering (ICSE), 201

Is "Better Data" Better than "Better Data Miners"? (On the Benefits of Tuning SMOTE for Defect Prediction)

We report and fix an important systematic error in prior studies that ranked classifiers for software analytics. Those studies did not (a) assess classifiers on multiple criteria and they did not (b) study how variations in the data affect the results. Hence, this paper applies (a) multi-criteria tests while (b) fixing the weaker regions of the training data (using SMOTUNED, which is a self-tuning version of SMOTE). This approach leads to dramatically large increases in software defect predictions. When applied in a 5*5 cross-validation study for 3,681 JAVA classes (containing over a million lines of code) from open source systems, SMOTUNED increased AUC and recall by 60% and 20% respectively. These improvements are independent of the classifier used to predict for quality. Same kind of pattern (improvement) was observed when a comparative analysis of SMOTE and SMOTUNED was done against the most recent class imbalance technique. In conclusion, for software analytic tasks like defect prediction, (1) data pre-processing can be more important than classifier choice, (2) ranking studies are incomplete without such pre-processing, and (3) SMOTUNED is a promising candidate for pre-processing.Comment: 10 pages + 2 references. Accepted to International Conference of Software Engineering (ICSE), 201

Visualization and analysis of software clones

Code clones are identical or similar fragments of code in a software system. Simple copy-paste programming practices of developers, reusing existing code fragments instead of implementing from the scratch, limitations of both programming languages and developers are the primary reasons behind code cloning. Despite the maintenance implications of clones, it is not possible to conclude that cloning is harmful because there are also benefits in using them (e.g. faster and independent development). As a result, researchers at least agree that clones need to be analyzed before aggressively refactoring them. Although a large number of state-of-the-art clone detectors are available today, handling raw clone data is challenging due to the textual nature and large volume. To address this issue, we propose a framework for large-scale clone analysis and develop a maintenance support environment based on the framework called VisCad. To manage the large volume of clone data, VisCad employs the Visual Information Seeking Mantra: overview first, zoom and filter, then provide details-on-demand. With VisCad users can analyze and identify distinctive code clones through a set of visualization techniques, metrics covering different clone relations and data filtering operations. The loosely coupled architecture of VisCad allows users to work with any clone detection tool that reports source-coordinates of the found clones. This yields the opportunity to work with the clone detectors of choice, which is important because each clone detector has its own strengths and weaknesses. In addition, we extend the support for clone evolution analysis, which is important to understand the cause and effect of changes at the clone level during the evolution of a software system. Such information can be used to make software maintenance decisions like when to refactor clones. We propose and implement a set of visualizations that can allow users to analyze the evolution of clones from a coarse grain to a fine grain level. Finally, we use VisCad to extract both spatial and temporal clone data to predict changes to clones in a future release/revision of the software, which can be used to rank clone classes as another means of handling a large volume of clone data. We believe that VisCad makes clone comprehension easier and it can be used as a test-bed to further explore code cloning, necessary in building a successful clone management system

Animating the evolution of software

The use and development of open source software has increased significantly in the last decade. The high frequency of changes and releases across a distributed environment requires good project management tools in order to control the process adequately. However, even with these tools in place, the nature of the development and the fact that developers will often work on many other projects simultaneously, means that the developers are unlikely to have a clear picture of the current state of the project at any time. Furthermore, the poor documentation associated with many projects has a detrimental effect when encouraging new developers to contribute to the software. A typical version control repository contains a mine of information that is not always obvious and not easy to comprehend in its raw form. However, presenting this historical data in a suitable format by using software visualisation techniques allows the evolution of the software over a number of releases to be shown. This allows the changes that have been made to the software to be identified clearly, thus ensuring that the effect of those changes will also be emphasised. This then enables both managers and developers to gain a more detailed view of the current state of the project. The visualisation of evolving software introduces a number of new issues. This thesis investigates some of these issues in detail, and recommends a number of solutions in order to alleviate the problems that may otherwise arise. The solutions are then demonstrated in the definition of two new visualisations. These use historical data contained within version control repositories to show the evolution of the software at a number of levels of granularity. Additionally, animation is used as an integral part of both visualisations - not only to show the evolution by representing the progression of time, but also to highlight the changes that have occurred. Previously, the use of animation within software visualisation has been primarily restricted to small-scale, hand generated visualisations. However, this thesis shows the viability of using animation within software visualisation with automated visualisations on a large scale. In addition, evaluation of the visualisations has shown that they are suitable for showing the changes that have occurred in the software over a period of time, and subsequently how the software has evolved. These visualisations are therefore suitable for use by developers and managers involved with open source software. In addition, they also provide a basis for future research in evolutionary visualisations, software evolution and open source development

Assessing architectural evolution: A case study

This is the post-print version of the Article. The official published can be accessed from the link below - Copyright @ 2011 SpringerThis paper proposes to use a historical perspective on generic laws, principles, and guidelines, like Lehman’s software evolution laws and Martin’s design principles, in order to achieve a multi-faceted process and structural assessment of a system’s architectural evolution. We present a simple structural model with associated historical metrics and visualizations that could form part of an architect’s dashboard. We perform such an assessment for the Eclipse SDK, as a case study of a large, complex, and long-lived system for which sustained effective architectural evolution is paramount. The twofold aim of checking generic principles on a well-know system is, on the one hand, to see whether there are certain lessons that could be learned for best practice of architectural evolution, and on the other hand to get more insights about the applicability of such principles. We find that while the Eclipse SDK does follow several of the laws and principles, there are some deviations, and we discuss areas of architectural improvement and limitations of the assessment approach

Protocol for a Systematic Literature Review on Design Decisions for UML-based DSMLs

Series: Technical Reports / Institute for Information Systems and New Medi