Scalable Storage for Digital Libraries

I propose a storage system optimised for digital libraries. Its key features are its heterogeneous scalability; its integration and exploitation of rich semantic metadata associated with digital objects; its use of a name space; and its aggressive performance optimisation in the digital library domain

Designing Reliable High-Performance Storage Systems for HPC Environments

Advances in processing capability have far outpaced advances in I/O throughput and latency. Distributed file system based storage systems help to address this performance discrepancy in high performance computing (HPC) environments; however, they can be difficult to deploy and challenging to maintain. This thesis explores the design considerations as well as the pitfalls faced when deploying high performance storage systems. It includes best practices in identifying system requirements, techniques for generating I/O profiles of applications, and recommendations for disk subsystem configuration and maintenance based upon a number of recent papers addressing latent sector and unrecoverable read errors

A shared-disk parallel cluster file system

Dissertação apresentada para obtenção do Grau de Doutor em Informática Pela Universidade Nova de Lisboa, Faculdade de Ciências e TecnologiaToday, clusters are the de facto cost effective platform both for high performance computing (HPC) as well as IT environments. HPC and IT are quite different environments and differences include, among others, their choices on file systems and storage: HPC favours parallel file systems geared towards maximum I/O bandwidth, but which are not fully POSIX-compliant and were devised to run on top of (fault prone) partitioned storage; conversely, IT data centres favour both external disk arrays (to provide highly available storage) and POSIX compliant file systems, (either general purpose or shared-disk cluster file systems, CFSs). These specialised file systems do perform very well in their target environments provided that applications do not require some lateral features, e.g., no file locking on parallel file systems, and no high performance writes over cluster-wide shared files on CFSs. In brief, we can say that none of the above approaches solves the problem of providing high levels of reliability and performance to both worlds. Our pCFS proposal makes a contribution to change this situation: the rationale is to take advantage on the best of both – the reliability of cluster file systems and the high performance of parallel file systems. We don’t claim to provide the absolute best of each, but we aim at full POSIX compliance, a rich feature set, and levels of reliability and performance good enough for broad usage – e.g., traditional as well as HPC applications, support of clustered DBMS engines that may run over regular files, and video streaming. pCFS’ main ideas include: · Cooperative caching, a technique that has been used in file systems for distributed disks but, as far as we know, was never used either in SAN based cluster file systems or in parallel file systems. As a result, pCFS may use all infrastructures (LAN and SAN) to move data. · Fine-grain locking, whereby processes running across distinct nodes may define nonoverlapping byte-range regions in a file (instead of the whole file) and access them in parallel, reading and writing over those regions at the infrastructure’s full speed (provided that no major metadata changes are required). A prototype was built on top of GFS (a Red Hat shared disk CFS): GFS’ kernel code was slightly modified, and two kernel modules and a user-level daemon were added. In the prototype, fine grain locking is fully implemented and a cluster-wide coherent cache is maintained through data (page fragments) movement over the LAN. Our benchmarks for non-overlapping writers over a single file shared among processes running on different nodes show that pCFS’ bandwidth is 2 times greater than NFS’ while being comparable to that of the Parallel Virtual File System (PVFS), both requiring about 10 times more CPU. And pCFS’ bandwidth also surpasses GFS’ (600 times for small record sizes, e.g., 4 KB, decreasing down to 2 times for large record sizes, e.g., 4 MB), at about the same CPU usage.Lusitania, Companhia de Seguros S.A, Programa IBM Shared University Research (SUR

Dynamic Virtual Page-based Flash Translation Layer with Novel Hot Data Identification and Adaptive Parallelism Management

Solid-state disks (SSDs) tend to replace traditional motor-driven hard disks in high-end storage devices in past few decades. However, various inherent features, such as out-of-place update [resorting to garbage collection (GC)] and limited endurance (resorting to wear leveling), need to be reduced to a large extent before that day comes. Both the GC and wear leveling fundamentally depend on hot data identification (HDI). In this paper, we propose a hot data-aware flash translation layer architecture based on a dynamic virtual page (DVPFTL) so as to improve the performance and lifetime of NAND flash devices. First, we develop a generalized dual layer HDI (DL-HDI) framework, which is composed of a cold data pre-classifier and a hot data post-identifier. Those can efficiently follow the frequency and recency of information access. Then, we design an adaptive parallelism manager (APM) to assign the clustered data chunks to distinct resident blocks in the SSD so as to prolong its endurance. Finally, the experimental results from our realized SSD prototype indicate that the DVPFTL scheme has reliably improved the parallelizability and endurance of NAND flash devices with improved GC-costs, compared with related works.Peer reviewe

Flexible allocation and space management in storage systems

In this dissertation, we examine some of the challenges faced by the emerging networked storage systems. We focus on two main issues. Current file systems allocate storage statically at the time of their creation. This results in many suboptimal scenarios, for example: (a) space on the disk is not allocated well across multiple file systems, (b) data is not organized well for typical access patterns. We propose Virtual Allocation for flexible storage allocation. Virtual allocation separates storage allocation from the file system. It employs an allocate-on-write strategy, which lets applications fit into the actual usage of storage space without regard to the configured file system size. This improves flexibility by allowing storage space to be shared across different file systems. We present the design of virtual allocation and an evaluation of it through benchmarks based on a prototype system on Linux. Next, based on virtual allocation, we consider the problem of balancing locality and load in networked storage systems with multiple storage devices (or bricks). Data distribution affects locality and load balance across the devices in a networked storage system. We propose user-optimal data migration scheme which tries to balance locality and load balance in such networked storage systems. The presented approach automatically and transparently manages migration of data blocks among disks as data access patterns and loads change over time. We built a prototype system on Linux and present the design of user-optimal migration and an evaluation of it through realistic experiments

RAIDX: RAID EXTENDED FOR HETEROGENEOUS ARRAYS

The computer hard drive market has diversified with the establishment of solid state disks (SSDs) as an alternative to magnetic hard disks (HDDs). Each hard drive technology has its advantages: the SSDs are faster than HDDs but the HDDs are cheaper. Our goal is to construct a parallel storage system with HDDs and SSDs such that the parallel system is as fast as the SSDs. Achieving this goal is challenging since the slow HDDs store more data and become bottlenecks, while the SSDs remain idle. RAIDX is a parallel storage system designed for disks of different speeds, capacities and technologies. The RAIDX hardware consists of an array of disks; the RAIDX software consists of data structures and algorithms that allow the disks to be viewed as a single storage unit that has capacity equal to the sum of the capacities of its disks, failure rate lower than the failure rate of its individual disks, and speeds close to that of its faster disks. RAIDX achieves its performance goals with the aid of its novel parallel data organization technique that allows storage data to be moved on the fly without impacting the upper level file system. We show that storage data accesses satisfy the locality of reference principle, whereby only a small fraction of storage data are accessed frequently. RAIDX has a monitoring program that identifies frequently accessed blocks and a migration program that moves frequently accessed blocks to faster disks. The faster disks are caches that store the solo copy of frequently accessed data. Experimental evaluation has shown that a HDD+SSD RAIDX array is as fast as an all-SSD array when the workload shows locality of reference

Redundant disk arrays: Reliable, parallel secondary storage

During the past decade, advances in processor and memory technology have given rise to increases in computational performance that far outstrip increases in the performance of secondary storage technology. Coupled with emerging small-disk technology, disk arrays provide the cost, volume, and capacity of current disk subsystems, by leveraging parallelism, many times their performance. Unfortunately, arrays of small disks may have much higher failure rates than the single large disks they replace. Redundant arrays of inexpensive disks (RAID) use simple redundancy schemes to provide high data reliability. The data encoding, performance, and reliability of redundant disk arrays are investigated. Organizing redundant data into a disk array is treated as a coding problem. Among alternatives examined, codes as simple as parity are shown to effectively correct single, self-identifying disk failures

Galley: A New Parallel File System for Parallel Applications

Most current multiprocessor file systems are designed to use multiple disks in parallel, using the high aggregate bandwidth to meet the growing I/O requirements of parallel scientific applications. Most multiprocessor file systems provide applications with a conventional Unix-like interface, allowing the application to access those multiple disks transparently. This interface conceals the parallelism within the file system, increasing the ease of programmability, but making it difficult or impossible for sophisticated application and library programmers to use knowledge about their I/O to exploit that parallelism. In addition to providing an insufficient interface, most current multiprocessor file systems are optimized for a different workload than they are being asked to support. In this work we examine current multiprocessor file systems, as well as how those file systems are used by scientific applications. Contrary to the expectations of the designers of current parallel file systems, the workloads on those systems are dominated by requests to read and write small pieces of data. Furthermore, rather than being accessed sequentially and contiguously, as in uniprocessor and supercomputer workloads, files in multiprocessor file systems are accessed in regular, structured, but non-contiguous patterns. Based on our observations of multiprocessor workloads, we have designed Galley, a new parallel file system that is intended to efficiently support realistic scientific multiprocessor workloads. In this work, we introduce Galley and discuss its design and implementation. We describe Galley\u27s new three-dimensional file structure and discuss how that structure can be used by parallel applications to achieve higher performance. We introduce several new data-access interfaces, which allow applications to explicitly describe the regular access patterns we found to be common in parallel file system workloads. We show how these new interfaces allow parallel applications to achieve tremendous increases in I/O performance. Finally, we discuss how Galley\u27s new file structure and data-access interfaces can be useful in practice