59,130 research outputs found

    Structural Matching Via Optimal Basis Graphs

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    The ‘basis graph’ approach to structural matching uses a fixed set of small (4 node) graphs to characterize local structure. We compute mapping probabilities by first finding the probability of a basis graph being an induced subgraph of the input graph. The similarity of these probabilities is used to compare nodes of the input graphs. The method permits common subgraphs to be identified without the use of any node or edge coloring. We report on an improved, simpler, version of the algorithm, which has also been optimized. Performance is compared with the LeRP method, which is based on length-r paths. Both methods are approximate with polynomial bounds on both memory and on the worst-case compute effort. These methods work on arbitrary types of undirected graphs, and tests with strongly regular graphs are included. Monte Carlo test trials (3000+) included up to 100% additional (noise) nodes

    Convex Graph Invariant Relaxations For Graph Edit Distance

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    The edit distance between two graphs is a widely used measure of similarity that evaluates the smallest number of vertex and edge deletions/insertions required to transform one graph to another. It is NP-hard to compute in general, and a large number of heuristics have been proposed for approximating this quantity. With few exceptions, these methods generally provide upper bounds on the edit distance between two graphs. In this paper, we propose a new family of computationally tractable convex relaxations for obtaining lower bounds on graph edit distance. These relaxations can be tailored to the structural properties of the particular graphs via convex graph invariants. Specific examples that we highlight in this paper include constraints on the graph spectrum as well as (tractable approximations of) the stability number and the maximum-cut values of graphs. We prove under suitable conditions that our relaxations are tight (i.e., exactly compute the graph edit distance) when one of the graphs consists of few eigenvalues. We also validate the utility of our framework on synthetic problems as well as real applications involving molecular structure comparison problems in chemistry.Comment: 27 pages, 7 figure

    Many-to-Many Graph Matching: a Continuous Relaxation Approach

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    Graphs provide an efficient tool for object representation in various computer vision applications. Once graph-based representations are constructed, an important question is how to compare graphs. This problem is often formulated as a graph matching problem where one seeks a mapping between vertices of two graphs which optimally aligns their structure. In the classical formulation of graph matching, only one-to-one correspondences between vertices are considered. However, in many applications, graphs cannot be matched perfectly and it is more interesting to consider many-to-many correspondences where clusters of vertices in one graph are matched to clusters of vertices in the other graph. In this paper, we formulate the many-to-many graph matching problem as a discrete optimization problem and propose an approximate algorithm based on a continuous relaxation of the combinatorial problem. We compare our method with other existing methods on several benchmark computer vision datasets.Comment: 1

    A Survey on Graph Kernels

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    Graph kernels have become an established and widely-used technique for solving classification tasks on graphs. This survey gives a comprehensive overview of techniques for kernel-based graph classification developed in the past 15 years. We describe and categorize graph kernels based on properties inherent to their design, such as the nature of their extracted graph features, their method of computation and their applicability to problems in practice. In an extensive experimental evaluation, we study the classification accuracy of a large suite of graph kernels on established benchmarks as well as new datasets. We compare the performance of popular kernels with several baseline methods and study the effect of applying a Gaussian RBF kernel to the metric induced by a graph kernel. In doing so, we find that simple baselines become competitive after this transformation on some datasets. Moreover, we study the extent to which existing graph kernels agree in their predictions (and prediction errors) and obtain a data-driven categorization of kernels as result. Finally, based on our experimental results, we derive a practitioner's guide to kernel-based graph classification

    Structural matching by discrete relaxation

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    This paper describes a Bayesian framework for performing relational graph matching by discrete relaxation. Our basic aim is to draw on this framework to provide a comparative evaluation of a number of contrasting approaches to relational matching. Broadly speaking there are two main aspects to this study. Firstly we locus on the issue of how relational inexactness may be quantified. We illustrate that several popular relational distance measures can be recovered as specific limiting cases of the Bayesian consistency measure. The second aspect of our comparison concerns the way in which structural inexactness is controlled. We investigate three different realizations ai the matching process which draw on contrasting control models. The main conclusion of our study is that the active process of graph-editing outperforms the alternatives in terms of its ability to effectively control a large population of contaminating clutter
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