Fast Separable Non-Local Means

We propose a simple and fast algorithm called PatchLift for computing distances between patches (contiguous block of samples) extracted from a given one-dimensional signal. PatchLift is based on the observation that the patch distances can be efficiently computed from a matrix that is derived from the one-dimensional signal using lifting; importantly, the number of operations required to compute the patch distances using this approach does not scale with the patch length. We next demonstrate how PatchLift can be used for patch-based denoising of images corrupted with Gaussian noise. In particular, we propose a separable formulation of the classical Non-Local Means (NLM) algorithm that can be implemented using PatchLift. We demonstrate that the PatchLift-based implementation of separable NLM is few orders faster than standard NLM, and is competitive with existing fast implementations of NLM. Moreover, its denoising performance is shown to be consistently superior to that of NLM and some of its variants, both in terms of PSNR/SSIM and visual quality

Stacked Denoising Autoencoders and Transfer Learning for Immunogold Particles Detection and Recognition

In this paper we present a system for the detection of immunogold particles and a Transfer Learning (TL) framework for the recognition of these immunogold particles. Immunogold particles are part of a high-magnification method for the selective localization of biological molecules at the subcellular level only visible through Electron Microscopy. The number of immunogold particles in the cell walls allows the assessment of the differences in their compositions providing a tool to analise the quality of different plants. For its quantization one requires a laborious manual labeling (or annotation) of images containing hundreds of particles. The system that is proposed in this paper can leverage significantly the burden of this manual task. For particle detection we use a LoG filter coupled with a SDA. In order to improve the recognition, we also study the applicability of TL settings for immunogold recognition. TL reuses the learning model of a source problem on other datasets (target problems) containing particles of different sizes. The proposed system was developed to solve a particular problem on maize cells, namely to determine the composition of cell wall ingrowths in endosperm transfer cells. This novel dataset as well as the code for reproducing our experiments is made publicly available. We determined that the LoG detector alone attained more than 84\% of accuracy with the F-measure. Developing immunogold recognition with TL also provided superior performance when compared with the baseline models augmenting the accuracy rates by 10\%

Self-Tuned Deep Super Resolution

Deep learning has been successfully applied to image super resolution (SR). In this paper, we propose a deep joint super resolution (DJSR) model to exploit both external and self similarities for SR. A Stacked Denoising Convolutional Auto Encoder (SDCAE) is first pre-trained on external examples with proper data augmentations. It is then fine-tuned with multi-scale self examples from each input, where the reliability of self examples is explicitly taken into account. We also enhance the model performance by sub-model training and selection. The DJSR model is extensively evaluated and compared with state-of-the-arts, and show noticeable performance improvements both quantitatively and perceptually on a wide range of images

A Bayesian Hyperprior Approach for Joint Image Denoising and Interpolation, with an Application to HDR Imaging

Recently, impressive denoising results have been achieved by Bayesian approaches which assume Gaussian models for the image patches. This improvement in performance can be attributed to the use of per-patch models. Unfortunately such an approach is particularly unstable for most inverse problems beyond denoising. In this work, we propose the use of a hyperprior to model image patches, in order to stabilize the estimation procedure. There are two main advantages to the proposed restoration scheme: Firstly it is adapted to diagonal degradation matrices, and in particular to missing data problems (e.g. inpainting of missing pixels or zooming). Secondly it can deal with signal dependent noise models, particularly suited to digital cameras. As such, the scheme is especially adapted to computational photography. In order to illustrate this point, we provide an application to high dynamic range imaging from a single image taken with a modified sensor, which shows the effectiveness of the proposed scheme.Comment: Some figures are reduced to comply with arxiv's size constraints. Full size images are available as HAL technical report hal-01107519v5, IEEE Transactions on Computational Imaging, 201