10,230 research outputs found
Fast and Tiny Structural Self-Indexes for XML
XML document markup is highly repetitive and therefore well compressible
using dictionary-based methods such as DAGs or grammars. In the context of
selectivity estimation, grammar-compressed trees were used before as synopsis
for structural XPath queries. Here a fully-fledged index over such grammars is
presented. The index allows to execute arbitrary tree algorithms with a
slow-down that is comparable to the space improvement. More interestingly,
certain algorithms execute much faster over the index (because no decompression
occurs). E.g., for structural XPath count queries, evaluating over the index is
faster than previous XPath implementations, often by two orders of magnitude.
The index also allows to serialize XML results (including texts) faster than
previous systems, by a factor of ca. 2-3. This is due to efficient copy
handling of grammar repetitions, and because materialization is totally
avoided. In order to compare with twig join implementations, we implemented a
materializer which writes out pre-order numbers of result nodes, and show its
competitiveness.Comment: 13 page
Overfitting in Synthesis: Theory and Practice (Extended Version)
In syntax-guided synthesis (SyGuS), a synthesizer's goal is to automatically
generate a program belonging to a grammar of possible implementations that
meets a logical specification. We investigate a common limitation across
state-of-the-art SyGuS tools that perform counterexample-guided inductive
synthesis (CEGIS). We empirically observe that as the expressiveness of the
provided grammar increases, the performance of these tools degrades
significantly.
We claim that this degradation is not only due to a larger search space, but
also due to overfitting. We formally define this phenomenon and prove
no-free-lunch theorems for SyGuS, which reveal a fundamental tradeoff between
synthesizer performance and grammar expressiveness.
A standard approach to mitigate overfitting in machine learning is to run
multiple learners with varying expressiveness in parallel. We demonstrate that
this insight can immediately benefit existing SyGuS tools. We also propose a
novel single-threaded technique called hybrid enumeration that interleaves
different grammars and outperforms the winner of the 2018 SyGuS competition
(Inv track), solving more problems and achieving a mean speedup.Comment: 24 pages (5 pages of appendices), 7 figures, includes proofs of
theorem
Hyperbolic tilings and formal language theory
In this paper, we try to give the appropriate class of languages to which
belong various objects associated with tessellations in the hyperbolic plane.Comment: In Proceedings MCU 2013, arXiv:1309.104
An overview of the role of context-sensitive HMMs in the prediction of ncRNA genes
Non-coding RNAs (ncRNA) are RNA molecules that function in the cells without being translated into proteins. In recent years, much evidence has been found that ncRNAs play a crucial role in various biological processes. As a result, there has been an increasing interest in the prediction of ncRNA genes. Due to the conserved secondary structure in ncRNAs, there exist pairwise dependencies between distant bases. These dependencies cannot be effectively modeled using traditional HMMs, and we need a more complex model such as the context-sensitive HMM (csHMM). In this paper, we overview the role of csHMMs in the RNA secondary structure analysis and the prediction of ncRNA genes. It is demonstrated that the context-sensitive HMMs can serve as an efficient framework for these purposes
Corpora and evaluation tools for multilingual named entity grammar development
We present an effort for the development of multilingual named entity grammars in a unification-based finite-state formalism (SProUT). Following an extended version of the MUC7 standard, we have developed Named Entity Recognition grammars for German, Chinese, Japanese, French, Spanish, English, and Czech. The grammars recognize person names, organizations, geographical locations, currency, time and date expressions. Subgrammars and gazetteers are shared as much as possible for the grammars of the different languages. Multilingual corpora from the business domain are used for grammar development and evaluation. The annotation format (named entity and other linguistic information) is described. We present an evaluation tool which provides detailed statistics and diagnostics, allows for partial matching of annotations, and supports user-defined mappings between different annotation and grammar output formats
CHR Grammars
A grammar formalism based upon CHR is proposed analogously to the way
Definite Clause Grammars are defined and implemented on top of Prolog. These
grammars execute as robust bottom-up parsers with an inherent treatment of
ambiguity and a high flexibility to model various linguistic phenomena. The
formalism extends previous logic programming based grammars with a form of
context-sensitive rules and the possibility to include extra-grammatical
hypotheses in both head and body of grammar rules. Among the applications are
straightforward implementations of Assumption Grammars and abduction under
integrity constraints for language analysis. CHR grammars appear as a powerful
tool for specification and implementation of language processors and may be
proposed as a new standard for bottom-up grammars in logic programming.
To appear in Theory and Practice of Logic Programming (TPLP), 2005Comment: 36 pp. To appear in TPLP, 200
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