Runtime Optimizations for Prediction with Tree-Based Models

Tree-based models have proven to be an effective solution for web ranking as well as other problems in diverse domains. This paper focuses on optimizing the runtime performance of applying such models to make predictions, given an already-trained model. Although exceedingly simple conceptually, most implementations of tree-based models do not efficiently utilize modern superscalar processor architectures. By laying out data structures in memory in a more cache-conscious fashion, removing branches from the execution flow using a technique called predication, and micro-batching predictions using a technique called vectorization, we are able to better exploit modern processor architectures and significantly improve the speed of tree-based models over hard-coded if-else blocks. Our work contributes to the exploration of architecture-conscious runtime implementations of machine learning algorithms

GeantV: Results from the prototype of concurrent vector particle transport simulation in HEP

Full detector simulation was among the largest CPU consumer in all CERN experiment software stacks for the first two runs of the Large Hadron Collider (LHC). In the early 2010's, the projections were that simulation demands would scale linearly with luminosity increase, compensated only partially by an increase of computing resources. The extension of fast simulation approaches to more use cases, covering a larger fraction of the simulation budget, is only part of the solution due to intrinsic precision limitations. The remainder corresponds to speeding-up the simulation software by several factors, which is out of reach using simple optimizations on the current code base. In this context, the GeantV R&D project was launched, aiming to redesign the legacy particle transport codes in order to make them benefit from fine-grained parallelism features such as vectorization, but also from increased code and data locality. This paper presents extensively the results and achievements of this R&D, as well as the conclusions and lessons learnt from the beta prototype.Comment: 34 pages, 26 figures, 24 table

Exploiting Properties of CMP Cache Traffic in Designing Hybrid Packet/Circuit Switched NoCs

Chip multiprocessors with few to tens of processing cores are already commercially available. Increased scaling of technology is making it feasible to integrate even more cores on a single chip. Providing the cores with fast access to data is vital to overall system performance. When a core requires access to a piece of data, the core's private cache memory is searched first. If a miss occurs, the data is looked up in the next level(s) of the memory hierarchy, where often one or more levels of cache are shared between two or more cores. Communication between the cores and the slices of the on-chip shared cache is carried through the network-on-chip(NoC). Interestingly, the cache and NoC mutually affect the operation of each other; communication over the NoC affects the access latency of cache data, while the cache organization generates the coherence and data messages, thus affecting the communication patterns and latency over the NoC. This thesis considers hybrid packet/circuit switched NoCs, i.e., packet switched NoCs enhanced with the ability to configure circuits. The communication and performance benefit that come from using circuits is predicated on amortizing the time cost incurred for configuring the circuits. To address this challenge, NoC designs are proposed that take advantage of properties of the cache traffic, namely temporal locality and predictability, to amortize or hide the circuit configuration time cost. First, a coarse-grained circuit configuration policy is proposed that exploits the temporal locality in the cache traffic to periodically configure circuits for the heavily communicating nodes. This allows the design of a locality-aware cache that promotes temporal communication locality through data placement, while designing suitable data replacement and migration policies. Next, a fine-grained configuration policy, called Déjà Vu switching, is proposed for leveraging predictability of data messages by initiating a circuit configuration as soon as a cache hit is detected and before the data becomes available. Its benefit is demonstrated for saving interconnect energy in multi-plane NoCs. Finally, a more proactive configuration policy is proposed for fast caches, where circuit reservations are initiated by request messages, which can greatly improve communication latency and system performance

A Wait-free Multi-word Atomic (1,N) Register for Large-scale Data Sharing on Multi-core Machines

We present a multi-word atomic (1,N) register for multi-core machines exploiting Read-Modify-Write (RMW) instructions to coordinate the writer and the readers in a wait-free manner. Our proposal, called Anonymous Readers Counting (ARC), enables large-scale data sharing by admitting up to $2^{32}-2$ concurrent readers on off-the-shelf 64-bits machines, as opposed to the most advanced RMW-based approach which is limited to 58 readers. Further, ARC avoids multiple copies of the register content when accessing it---this affects classical register's algorithms based on atomic read/write operations on single words. Thus it allows for higher scalability with respect to the register size. Moreover, ARC explicitly reduces improves performance via a proper limitation of RMW instructions in case of read operations, and by supporting constant time for read operations and amortized constant time for write operations. A proof of correctness of our register algorithm is also provided, together with experimental data for a comparison with literature proposals. Beyond assessing ARC on physical platforms, we carry out as well an experimentation on virtualized infrastructures, which shows the resilience of wait-free synchronization as provided by ARC with respect to CPU-steal times, proper of more modern paradigms such as cloud computing.Comment: non

Parallel Construction of Wavelet Trees on Multicore Architectures

The wavelet tree has become a very useful data structure to efficiently represent and query large volumes of data in many different domains, from bioinformatics to geographic information systems. One problem with wavelet trees is their construction time. In this paper, we introduce two algorithms that reduce the time complexity of a wavelet tree's construction by taking advantage of nowadays ubiquitous multicore machines. Our first algorithm constructs all the levels of the wavelet in parallel in $O(n)$ time and $O(n\lg\sigma + \sigma\lg n)$ bits of working space, where $n$ is the size of the input sequence and $\sigma$ is the size of the alphabet. Our second algorithm constructs the wavelet tree in a domain-decomposition fashion, using our first algorithm in each segment, reaching $O(\lg n)$ time and $O(n\lg\sigma + p\sigma\lg n/\lg\sigma)$ bits of extra space, where $p$ is the number of available cores. Both algorithms are practical and report good speedup for large real datasets.Comment: This research has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Sk{\l}odowska-Curie Actions H2020-MSCA-RISE-2015 BIRDS GA No. 69094

A methodology for speeding up loop kernels by exploiting the software information and the memory architecture

It is well-known that today׳s compilers and state of the art libraries have three major drawbacks. First, the compiler sub-problems are optimized separately; this is not efficient because the separate sub-problems optimization gives a different schedule for each sub-problem and these schedules cannot coexist as the refining of one, causes the degradation of another. Second, they take into account only part of the specific algorithm׳s information. Third, they take into account only a few hardware architecture parameters. These approaches cannot give an optimal solution. In this paper, a new methodology/pre-compiler is introduced, which speeds up loop kernels, by overcoming the above problems. This methodology solves four of the major scheduling sub-problems, together as one problem and not separately; these are the sub-problems of finding the schedules with the minimum numbers of (i) L1 data cache accesses, (ii) L2 data cache accesses, (iii) main memory data accesses, (iv) addressing instructions. First, the exploration space (possible solutions) is found according to the algorithm׳s information, e.g. array subscripts. Then, the exploration space is decreased by orders of magnitude, by applying constraint propagation to the software and hardware parameters. We take the C-code and the memory architecture parameters as input and we automatically produce a new faster C-code; this code cannot be obtained by applying the existing compiler transformations to the original code. The proposed methodology has been evaluated for five well-known algorithms in both general and embedded processors; it is compared with gcc and clang compilers and also with iterative compilation

Doctor of Philosophy

dissertationWith the explosion of chip transistor counts, the semiconductor industry has struggled with ways to continue scaling computing performance in line with historical trends. In recent years, the de facto solution to utilize excess transistors has been to increase the size of the on-chip data cache, allowing fast access to an increased portion of main memory. These large caches allowed the continued scaling of single thread performance, which had not yet reached the limit of instruction level parallelism (ILP). As we approach the potential limits of parallelism within a single threaded application, new approaches such as chip multiprocessors (CMP) have become popular for scaling performance utilizing thread level parallelism (TLP). This dissertation identifies the operating system as a ubiquitous area where single threaded performance and multithreaded performance have often been ignored by computer architects. We propose that novel hardware and OS co-design has the potential to significantly improve current chip multiprocessor designs, enabling increased performance and improved power efficiency. We show that the operating system contributes a nontrivial overhead to even the most computationally intense workloads and that this OS contribution grows to a significant fraction of total instructions when executing several common applications found in the datacenter. We demonstrate that architectural improvements have had little to no effect on the performance of the OS over the last 15 years, leaving ample room for improvements. We specifically consider three potential solutions to improve OS execution on modern processors. First, we consider the potential of a separate operating system processor (OSP) operating concurrently with general purpose processors (GPP) in a chip multiprocessor organization, with several specialized structures acting as efficient conduits between these processors. Second, we consider the potential of segregating existing caching structures to decrease cache interference between the OS and application. Third, we propose that there are components within the OS itself that should be refactored to be both multithreaded and cache topology aware, which in turn, improves the performance and scalability of many-threaded applications

Optimising Simulation Data Structures for the Xeon Phi

In this paper, we propose a lock-free architecture to accelerate logic gate circuit simulation using SIMD multi-core machines. We evaluate its performance on different test circuits simulated on the Intel Xeon Phi and 2 other machines. Comparisons are presented of this software/hardware combination with reported performances of GPU and other multi-core simulation platforms. Comparisons are also given between the lock free architecture and a leading commercial simulator running on the same Intel hardware