Effective SAR image despeckling based on bandlet and SRAD

Despeckling of a SAR image without losing features of the image is a daring task as it is intrinsically affected by multiplicative noise called speckle. This thesis proposes a novel technique to efficiently despeckle SAR images. Using an SRAD filter, a Bandlet transform based filter and a Guided filter, the speckle noise in SAR images is removed without losing the features in it. Here a SAR image input is given parallel to both SRAD and Bandlet transform based filters. The SRAD filter despeckles the SAR image and the despeckled output image is used as a reference image for the guided filter. In the Bandlet transform based despeckling scheme, the input SAR image is first decomposed using the bandlet transform. Then the coefficients obtained are thresholded using a soft thresholding rule. All coefficients other than the low-frequency ones are so adjusted. The generalized cross-validation (GCV) technique is employed here to find the most favorable threshold for each subband. The bandlet transform is able to extract edges and fine features in the image because it finds the direction where the function gives maximum value and in the same direction it builds extended orthogonal vectors. Simple soft thresholding using an optimum threshold despeckles the input SAR image. The guided filter with the help of a reference image removes the remaining speckle from the bandlet transform output. In terms of numerical and visual quality, the proposed filtering scheme surpasses the available despeckling schemes

Blind Speckle Decorrelation for SAR Image Despeckling

In the past few decades, several methods have been developed for despeckling synthetic aperture radar (SAR) images. A considerable number of them have been derived under the assumption of a fully-developed speckle model in which the multiplicative speckle noise is supposed to be a white process. Unfortunately, the transfer function of SAR acquisition systems can introduce a statistical correlation, which decreases the despeckling efficiency of such filters. In this paper, a whitening method is proposed for processing a complex image acquired by a SAR system. We demonstrate that the proposed approach allows the successful application of classical despeckling algorithms. First, we perform an estimation of the SAR system frequency response based on some statistical properties of the acquired image and by using realistic assumptions. Then, a decorrelation process is applied on the acquired image, taking into account the presence of point targets. Finally, the image is despeckled. The experimental results show that the despeckling filters achieve better performance when they are preceded by the proposed whitening method; furthermore, the radiometric characteristics of the image are preserve

Curvelets and Ridgelets

International audienceDespite the fact that wavelets have had a wide impact in image processing, they fail to efficiently represent objects with highly anisotropic elements such as lines or curvilinear structures (e.g. edges). The reason is that wavelets are non-geometrical and do not exploit the regularity of the edge curve. The Ridgelet and the Curvelet [3, 4] transforms were developed as an answer to the weakness of the separable wavelet transform in sparsely representing what appears to be simple building atoms in an image, that is lines, curves and edges. Curvelets and ridgelets take the form of basis elements which exhibit high directional sensitivity and are highly anisotropic [5, 6, 7, 8]. These very recent geometric image representations are built upon ideas of multiscale analysis and geometry. They have had an important success in a wide range of image processing applications including denoising [8, 9, 10], deconvolution [11, 12], contrast enhancement [13], texture analysis [14, 15], detection [16], watermarking [17], component separation [18], inpainting [19, 20] or blind source separation[21, 22]. Curvelets have also proven useful in diverse fields beyond the traditional image processing application. Let’s cite for example seismic imaging [10, 23, 24], astronomical imaging [25, 26, 27], scientific computing and analysis of partial differential equations [28, 29]. Another reason for the success of ridgelets and curvelets is the availability of fast transform algorithms which are available in non-commercial software packages following the philosophy of reproducible research, see [30, 31]

Numerical Issues When Using Wavelets

International audienceWavelets and related multiscale representations pervade all areas of signal processing. The recent inclusion of wavelet algorithms in JPEG 2000 – the new still-picture compression standard– testifies to this lasting and significant impact. The reason of the success of the wavelets is due to the fact that wavelet basis represents well a large class of signals, and therefore allows us to detect roughly isotropic elements occurring at all spatial scales and locations. As the noise in the physical sciences is often not Gaussian, the modeling, in the wavelet space, of many kind of noise (Poisson noise, combination of Gaussian and Poisson noise, long-memory 1/f noise, non-stationary noise, ...) has also been a key step for the use of wavelets in scientific, medical, or industrial applications [1]. Extensive wavelet packages exist now, commercial (see for example [2]) or non commercial (see for example [3, 4]), which allows any researcher, doctor, or engineer to analyze his data using wavelets

Image Restoration Methods for Retinal Images: Denoising and Interpolation

Retinal imaging provides an opportunity to detect pathological and natural age-related physiological changes in the interior of the eye. Diagnosis of retinal abnormality requires an image that is sharp, clear and free of noise and artifacts. However, to prevent tissue damage, retinal imaging instruments use low illumination radiation, hence, the signal-to-noise ratio (SNR) is reduced which means the total noise power is increased. Furthermore, noise is inherent in some imaging techniques. For example, in Optical Coherence Tomography (OCT) speckle noise is produced due to the coherence between the unwanted backscattered light. Improving OCT image quality by reducing speckle noise increases the accuracy of analyses and hence the diagnostic sensitivity. However, the challenge is to preserve image features while reducing speckle noise. There is a clear trade-off between image feature preservation and speckle noise reduction in OCT. Averaging multiple OCT images taken from a unique position provides a high SNR image, but it drastically increases the scanning time. In this thesis, we develop a multi-frame image denoising method for Spectral Domain OCT (SD-OCT) images extracted from a very close locations of a SD-OCT volume. The proposed denoising method was tested using two dictionaries: nonlinear (NL) and KSVD-based adaptive dictionary. The NL dictionary was constructed by adding phases, polynomial, exponential and boxcar functions to the conventional Discrete Cosine Transform (DCT) dictionary. The proposed denoising method denoises nearby frames of SD-OCT volume using a sparse representation method and combines them by selecting median intensity pixels from the denoised nearby frames. The result showed that both dictionaries reduced the speckle noise from the OCT images; however, the adaptive dictionary showed slightly better results at the cost of a higher computational complexity. The NL dictionary was also used for fundus and OCT image reconstruction. The performance of the NL dictionary was always better than that of other analytical-based dictionaries, such as DCT and Haar. The adaptive dictionary involves a lengthy dictionary learning process, and therefore cannot be used in real situations. We dealt this problem by utilizing a low-rank approximation. In this approach SD-OCT frames were divided into a group of noisy matrices that consist of non-local similar patches. A noise-free patch matrix was obtained from a noisy patch matrix utilizing a low-rank approximation. The noise-free patches from nearby frames were averaged to enhance the denoising. The denoised image obtained from the proposed approach was better than those obtained by several state-of-the-art methods. The proposed approach was extended to jointly denoise and interpolate SD-OCT image. The results show that joint denoising and interpolation method outperforms several existing state-of-the-art denoising methods plus bicubic interpolation.4 month

Wavelet-based noise reduction of cDNA microarray images

The advent of microarray imaging technology has lead to enormous progress in the life sciences by allowing scientists to analyze the expression of thousands of genes at a time. For complementary DNA (cDNA) microarray experiments, the raw data are a pair of red and green channel images corresponding to the treatment and control samples. These images are contaminated by a high level of noise due to the numerous noise sources affecting the image formation. A major challenge of microarray image analysis is the extraction of accurate gene expression measurements from the noisy microarray images. A crucial step in this process is denoising, which consists of reducing the noise in the observed microarray images while preserving the signal information as much as possible. This thesis deals with the problem of developing novel methods for reducing noise in cDNA microarray images for accurate estimation of the gene expression levels. Denoising methods based on the wavelet transform have shown significant success when applied to natural images. However, these methods are not very efficient for reducing noise in cDNA microarray images. An important reason for this is that existing methods are only capable of processing the red and green channel images separately. In doing so. they ignore the signal correlation as well as the noise correlation that exists between the wavelet coefficients of the two channels. The primary objective of this research is to design efficient wavelet-based noise reduction algorithms for cDNA microarray images that take into account these inter-channel dependencies by 'jointly' estimating the noise-free coefficients in both the channels. Denoising algorithms are developed using two types of wavelet transforms, namely, the frequently-used discrete wavelet transform (DWT) and the complex wavelet transform (CWT). The main advantage of using the DWT for denoising is that this transform is computationally very efficient. In order to obtain a better denoising performance for microarray images, however, the CWT is preferred to DWT because the former has good directional selectivity properties that are necessary for better representation of the circular edges of spots. The linear minimum mean squared error and maximum a posteriori estimation techniques are used to develop bivariate estimators for the noise-free coefficients of the two images. These estimators are derived by utilizing appropriate joint probability density functions for the image coefficients as well as the noise coefficients of the two channels. Extensive experimentations are carried out on a large set of cDNA microarray images to evaluate the performance of the proposed denoising methods as compared to the existing ones. Comparisons are made using standard metrics such as the peak signal-to-noise ratio (PSNR) for measuring the amount of noise removed from the pixels of the images, and the mean absolute error for measuring the accuracy of the estimated log-intensity ratios obtained from the denoised version of the images. Results indicate that the proposed denoising methods that are developed specifically for the microarray images do, indeed, lead to more accurate estimation of gene expression levels. Thus, it is expected that the proposed methods will play a significant role in improving the reliability of the results obtained from practical microarray experiments