Spatio-temporal segmentation and estimation of ocean surface currents from satellite sea surface temperature fields

International audienceThe use of satellite Sea Surface Temperature (SST) fields to retrieve zonal and meridional surface currents (U,V) is now a widespread idea. Since the classical approach involves temporal differencing of SST fields, we investigate in this paper the extent to which mesoscale ocean dynamics may be decomposed into a superposition of dynamical modes, characterized by different linear relationships between surface currents and temperature fields. Based on a completely observation-driven approach, we propose a latent class regression model from local satellite surface currents and patches of SST measurements. Applied to the highly dynamical Agulhas region, we demonstrate and discuss the geophysical relevance of the proposed mixture model to achieve a spatio-temporal segmentation and tracking of the ocean surface dynamical modes. Moreover, we show the accuracy of the proposed model to predict mesoscale surface currents from SST single maps

Segmentation of mesoscale ocean surface dynamics using satellite SST and SSH observations

International audienceMulti-satellite measurements of altimeter-derived Sea Surface Height (SSH) and Sea Surface Temperature (SST) provide a wealth of information about ocean circulation, especially mesoscale ocean dynamics which may involve strong spatio-temporal relationships between SSH and SST fields. Within an observation-driven framework, we investigate the extent to which mesoscale ocean dynamics may be decomposed into a mixture of dynamical modes, characterized by different local regressions between SSH and SST fields. Formally, we develop a novel latent class regression model to identify dynamical modes from joint SSH and SST observation series. Applied to the highly dynamical Agulhas region, we demonstrate and discuss the geophysical relevance of the proposed mixture model to achieve a spatio-temporal segmentation of the upper ocean dynamics

Ocean surface current retrieval using a non homogeneous Markov-switching multi-regime model

International audienceThis paper addresses the reconstruction of sea surface currents from satellite ocean sensing data. Whereas the classical surface currents derived from the SSH (Sea Surface Height) products are rather low space-time resolution fields (typically, 50 km and 12-day actual space-time grid resolution), we investigate the extent to which we can retrieve sea surface currents at higher resolution using daily SST (Sea Surface Temperature) satellite observations. State-of-the-art methods, which exploit classical optical flow schemes or nonlinear regression techniques, do not provide satisfactory results due to the space-time variabilities of the relationships between the SST and the sea surface current. Motivated by our recent joint SST-SSH identification of characterization of upper ocean dynamical modes, we here show that a multi-regime model, formally stated as a Markov-switching latent class regression model, provides a relevant model to capture the above-mentioned variabilities and reconstruct SST-driven sea surface currents. The considered case study within the Agulhas current demonstrates that our model retrieves high-resolution space-time details which cannot be resolved by the classical SSH-derived products

Advanced methods for earth observation data synergy for geophysical parameter retrieval

The first part of the thesis focuses on the analysis of relevant factors to estimate the response time between satellite-based and in-situ soil moisture (SM) using a Dynamic Time Warping (DTW). DTW was applied to the SMOS L4 SM, and was compared to in-situ root-zone SM in the REMEDHUS network in Western Spain. The method was customized to control the evolution of time lag during wetting and drying conditions. Climate factors in combination with crop growing seasons were studied to reveal SM-related processes. The heterogeneity of land use was analyzed using high-resolution images of NDVI from Sentinel-2 to provide information about the level of spatial representativity of SMOS data to each in-situ station. The comparison of long-term precipitation records and potential evapotranspiration allowed estimation of SM seasons describing different SM conditions depending on climate and soil properties. The second part of the thesis focuses on data-driven methods for sea ice segmentation and parameter retrieval. A Bayesian framework is employed to segment sets of multi-source satellite data. The Bayesian unsupervised learning algorithm allows to investigate the ‘hidden link’ between multiple data. The statistical properties are accounted for by a Gaussian Mixture Model, and the spatial interactions are reflected using Hidden Markov Random Fields. The algorithm segments spatial data into a number of classes, which are represented as a latent field in physical space and as clusters in feature space. In a first application, a two-step probabilistic approach based on Expectation-Maximization and the Bayesian segmentation algorithm was used to segment SAR images to discriminate surface water from sea ice types. Information on surface roughness is contained in the radar backscattering images which can be - in principle - used to detect melt ponds and to estimate high-resolution sea ice concentration (SIC). In a second study, the algorithm was applied to multi-incidence angle TB data from the SMOS L1C product to harness the its sensitivity to thin ice. The spatial patterns clearly discriminate well-determined areas of open water, old sea ice and a transition zone, which is sensitive to thin sea ice thickness (SIT) and SIC. In a third application, SMOS and the AMSR2 data are used to examine the joint effect of CIMR-like observations. The information contained in the low-frequency channels allows to reveal ranges of thin sea ice, and thicker ice can be determined from the relationship between the high-frequency channels and changing conditions as the sea ice ages. The proposed approach is suitable for merging large data sets and provides metrics for class analysis, and to make informed choices about integrating data from future missions into sea ice products. A regression neural network approach was investigated with the goal to infer SIT using TB data from the Flexible Microwave Payload 2 (FMPL-2) of the FSSCat mission. Two models - covering thin ice up to 0.6m and the full-range of SIT - were trained on Arctic data using ground truth data derived from the SMOS and Cryosat-2. This work demonstrates that moderate-cost CubeSat missions can provide valuable data for applications in Earth observation.La primera parte de la tesis se centra en el análisis de los factores relevantes para estimar el tiempo de respuesta entre la humedad del suelo (SM) basada en el satélite y la in-situ, utilizando una deformación temporal dinámica (DTW). El DTW se aplicó al SMOS L4 SM, y se comparó con la SM in-situ en la red REMEDHUS en el oeste de España. El método se adaptó para controlar la evolución del desfase temporal durante diferentes condiciones de humedad y secado. Se estudiaron los factores climáticos en combinación con los períodos de crecimiento de los cultivos para revelar los procesos relacionados con la SM. La heterogeneidad del uso del suelo se analizó utilizando imágenes de alta resolución de NDVI de Sentinel-2 para proporcionar información sobre el nivel de representatividad espacial de los datos de SMOS a cada estación in situ. La comparación de los patrones de precipitación a largo plazo y la evapotranspiración potencial permitió estimar las estaciones de SM que describen diferentes condiciones de SM en función del clima y las propiedades del suelo. La segunda parte de esta tesis se centra en métodos dirigidos por datos para la segmentación del hielo marino y la obtención de parámetros. Se emplea un método de inferencia bayesiano para segmentar conjuntos de datos satelitales de múltiples fuentes. El algoritmo de aprendizaje bayesiano no supervisado permite investigar el “vínculo oculto” entre múltiples datos. Las propiedades estadísticas se contabilizan mediante un modelo de mezcla gaussiana, y las interacciones espaciales se reflejan mediante campos aleatorios ocultos de Markov. El algoritmo segmenta los datos espaciales en una serie de clases, que se representan como un campo latente en el espacio físico y como clústeres en el espacio de las variables. En una primera aplicación, se utilizó un enfoque probabilístico de dos pasos basado en la maximización de expectativas y el algoritmo de segmentación bayesiano para segmentar imágenes SAR con el objetivo de discriminar el agua superficial de los tipos de hielo marino. La información sobre la rugosidad de la superficie está contenida en las imágenes de backscattering del radar, que puede utilizarse -en principio- para detectar estanques de deshielo y estimar la concentración de hielo marino (SIC) de alta resolución. En un segundo estudio, el algoritmo se aplicó a los datos TB de múltiples ángulos de incidencia del producto SMOS L1C para aprovechar su sensibilidad al hielo fino. Los patrones espaciales discriminan claramente áreas bien determinadas de aguas abiertas, hielo marino viejo y una zona de transición, que es sensible al espesor del hielo marino fino (SIT) y al SIC. En una tercera aplicación, se utilizan los datos de SMOS y de AMSR2 para examinar el efecto conjunto de las observaciones tipo CIMR. La información contenida en los canales de baja frecuencia permite revelar rangos de hielo marino delgado, y el hielo más grueso puede determinarse a partir de la relación entre los canales de alta frecuencia y las condiciones cambiantes a medida que el hielo marino envejece. El enfoque propuesto es adecuado para fusionar grandes conjuntos de datos y proporciona métricas para el análisis de clases, y para tomar decisiones informadas sobre la integración de datos de futuras misiones en los productos de hielo marino. Se investigó un enfoque de red neuronal de regresión con el objetivo de inferir el SIT utilizando datos de TB de la carga útil de microondas flexible 2 (FMPL-2) de la misión FSSCat. Se entrenaron dos modelos - que cubren el hielo fino hasta 0.6 m y el rango completo del SIT - con datos del Ártico utilizando datos de “ground truth” derivados del SMOS y del Cryosat-2. Este trabajo demuestra que las misiones CubeSat de coste moderado pueden proporcionar datos valiosos para aplicaciones de observación de la Tierra.Postprint (published version

Spatial-Temporal Data Mining for Ocean Science: Data, Methodologies, and Opportunities

With the increasing amount of spatial-temporal~(ST) ocean data, numerous spatial-temporal data mining (STDM) studies have been conducted to address various oceanic issues, e.g., climate forecasting and disaster warning. Compared with typical ST data (e.g., traffic data), ST ocean data is more complicated with some unique characteristics, e.g., diverse regionality and high sparsity. These characteristics make it difficult to design and train STDM models. Unfortunately, an overview of these studies is still missing, hindering computer scientists to identify the research issues in ocean while discouraging researchers in ocean science from applying advanced STDM techniques. To remedy this situation, we provide a comprehensive survey to summarize existing STDM studies in ocean. Concretely, we first summarize the widely-used ST ocean datasets and identify their unique characteristics. Then, typical ST ocean data quality enhancement techniques are discussed. Next, we classify existing STDM studies for ocean into four types of tasks, i.e., prediction, event detection, pattern mining, and anomaly detection, and elaborate the techniques for these tasks. Finally, promising research opportunities are highlighted. This survey will help scientists from the fields of both computer science and ocean science have a better understanding of the fundamental concepts, key techniques, and open challenges of STDM in ocean

Remote Sensing of the Aquatic Environments

The book highlights recent research efforts in the monitoring of aquatic districts with remote sensing observations and proximal sensing technology integrated with laboratory measurements. Optical satellite imagery gathered at spatial resolutions down to few meters has been used for quantitative estimations of harmful algal bloom extent and Chl-a mapping, as well as winds and currents from SAR acquisitions. The knowledge and understanding gained from this book can be used for the sustainable management of bodies of water across our planet

The value of remote sensing techniques in supporting effective extrapolation across multiple marine spatial scales

The reporting of ecological phenomena and environmental status routinely required point observations, collected with traditional sampling approaches to be extrapolated to larger reporting scales. This process encompasses difficulties that can quickly entrain significant errors. Remote sensing techniques offer insights and exceptional spatial coverage for observing the marine environment. This review provides guidance on (i) the structures and discontinuities inherent within the extrapolative process, (ii) how to extrapolate effectively across multiple spatial scales, and (iii) remote sensing techniques and data sets that can facilitate this process. This evaluation illustrates that remote sensing techniques are a critical component in extrapolation and likely to underpin the production of high-quality assessments of ecological phenomena and the regional reporting of environmental status. Ultimately, is it hoped that this guidance will aid the production of robust and consistent extrapolations that also make full use of the techniques and data sets that expedite this process

Monitoring the Characteristics of the Bohai Sea Ice Using High-Resolution Geostationary Ocean Color Imager (GOCI) Data

Satellite remote sensing data, such as moderate resolution imaging spectroradiometers (MODIS) and advanced very high-resolution radiometers (AVHRR), are being widely used to monitor sea ice conditions and their variability in the Bohai Sea, the southernmost frozen sea in the Northern Hemisphere. Monitoring the characteristics of the Bohai Sea ice can provide crucial information for ice disaster prevention for marine transportation, oil field operation, and regional climate change studies. Although these satellite data cover the study area with fairly high spatial resolution, their typically limited cloudless images pose serious restrictions for continuous observation of short-term dynamics, such as sub-seasonal changes. In this study, high spatiotemporal resolution (500 m and eight images per day) geostationary ocean color imager (GOCI) data with a high proportion of cloud-free images were used to monitor the characteristics of the Bohai Sea ice, including area and thickness. An object-based feature extraction method and an albedo-based thickness inversion model were used for estimating sea ice area and thickness, respectively. To demonstrate the efficacy of the new dataset, a total of 68 GOCI images were selected to analyze the evolution of sea ice area and thickness during the winter of 2012–2013 with severe sea ice conditions. The extracted sea ice area was validated using Landsat Thematic Mapper (TM) data with higher spatial resolution, and the estimated sea ice thickness was found to be consistent with in situ observation results. The entire sea ice freezing–melting processes, including the key events such as the day with the maximum ice area and the first and last days of the frozen season, were better resolved by the high temporal-resolution GOCI data compared with MODIS or AVHRR data. Both characteristics were found to be closely correlated with cumulative freezing/melting degree days. Our study demonstrates the applicability of the GOCI data as an improved dataset for studying the Bohai Sea ice, particularly for purposes that require high temporal resolution data, such as sea ice disaster monitoring

Investigating Behaviour and Population Dynamics of Striped Marlin (Kajikia audax) from the Southwest Pacific Ocean with Satellite Tags

Behaviour and distribution of striped marlin within the southwest Pacific Ocean were investigated using electronic tagging data collected from 2005–2008. A continuous-time correlated random-walk Kalman filter was used to integrate double-tagging data exhibiting variable error structures into movement trajectories composed of regular time-steps. This state-space trajectory integration approach improved longitude and latitude error distributions by 38.5 km and 22.2 km respectively. Using these trajectories as inputs, a behavioural classification model was developed to infer when, and where, ‘transiting’ and ‘area-restricted’ (ARB) pseudo-behavioural states occurred. ARB tended to occur at shallower depths (108±49 m) than did transiting behaviours (127±57 m). A 16 day post-release period of diminished ARB activity suggests that patterns of behaviour were affected by the capture and/or tagging events, implying that tagged animals may exhibit atypical behaviour upon release. The striped marlin in this study dove deeper and spent greater time at ≥200 m depth than those in the central and eastern Pacific Ocean. As marlin reached tropical latitudes (20–21°S) they consistently reversed directions, increased swimming speed and shifted to transiting behaviour. Reversals in the tropics also coincided with increases in swimming depth, including increased time ≥250 m. Our research provides enhanced understanding of the behavioural ecology of striped marlin. This has implications for the effectiveness of spatially explicit population models and we demonstrate the need to consider geographic variation when standardizing CPUE by depth, and provide data to inform natural and recreational fishing mortality parameters

Ovis: A framework for visual analysis of ocean forecast ensembles

pre-printWe present a novel integrated visualization system that enables interactive visual analysis of ensemble simulations of the sea surface height that is used in ocean forecasting. The position of eddies can be derived directly from the sea surface height and our visualization approach enables their interactive exploration and analysis.The behavior of eddies is important in different application settings of which we present two in this paper. First, we show an application for interactive planning of placement as well as operation of off-shore structures using real-world ensemble simulation data of the Gulf of Mexico. Off-shore structures, such as those used for oil exploration, are vulnerable to hazards caused by eddies, and the oil and gas industry relies on ocean forecasts for efficient operations. We enable analysis of the spatial domain, as well as the temporal evolution, for planning the placement and operation of structures.Eddies are also important for marine life. They transport water over large distances and with it also heat and other physical properties as well as biological organisms. In the second application we present the usefulness of our tool, which could be used for planning the paths of autonomous underwater vehicles, so called gliders, for marine scientists to study simulation data of the largely unexplored Red Sea