On Multilabel Classification Methods of Incompletely Labeled Biomedical Text Data

Multilabel classification is often hindered by incompletely labeled training datasets; for some items of such dataset (or even for all of them) some labels may be omitted. In this case, we cannot know if any item is labeled fully and correctly. When we train a classifier directly on incompletely labeled dataset, it performs ineffectively. To overcome the problem, we added an extra step, training set modification, before training a classifier. In this paper, we try two algorithms for training set modification: weighted k-nearest neighbor (WkNN) and soft supervised learning (SoftSL). Both of these approaches are based on similarity measurements between data vectors. We performed the experiments on AgingPortfolio (text dataset) and then rechecked on the Yeast (nontext genetic data). We tried SVM and RF classifiers for the original datasets and then for the modified ones. For each dataset, our experiments demonstrated that both classification algorithms performed considerably better when preceded by the training set modification step

Co-training for Demographic Classification Using Deep Learning from Label Proportions

Deep learning algorithms have recently produced state-of-the-art accuracy in many classification tasks, but this success is typically dependent on access to many annotated training examples. For domains without such data, an attractive alternative is to train models with light, or distant supervision. In this paper, we introduce a deep neural network for the Learning from Label Proportion (LLP) setting, in which the training data consist of bags of unlabeled instances with associated label distributions for each bag. We introduce a new regularization layer, Batch Averager, that can be appended to the last layer of any deep neural network to convert it from supervised learning to LLP. This layer can be implemented readily with existing deep learning packages. To further support domains in which the data consist of two conditionally independent feature views (e.g. image and text), we propose a co-training algorithm that iteratively generates pseudo bags and refits the deep LLP model to improve classification accuracy. We demonstrate our models on demographic attribute classification (gender and race/ethnicity), which has many applications in social media analysis, public health, and marketing. We conduct experiments to predict demographics of Twitter users based on their tweets and profile image, without requiring any user-level annotations for training. We find that the deep LLP approach outperforms baselines for both text and image features separately. Additionally, we find that co-training algorithm improves image and text classification by 4% and 8% absolute F1, respectively. Finally, an ensemble of text and image classifiers further improves the absolute F1 measure by 4% on average

Cross-lingual Distillation for Text Classification

Cross-lingual text classification(CLTC) is the task of classifying documents written in different languages into the same taxonomy of categories. This paper presents a novel approach to CLTC that builds on model distillation, which adapts and extends a framework originally proposed for model compression. Using soft probabilistic predictions for the documents in a label-rich language as the (induced) supervisory labels in a parallel corpus of documents, we train classifiers successfully for new languages in which labeled training data are not available. An adversarial feature adaptation technique is also applied during the model training to reduce distribution mismatch. We conducted experiments on two benchmark CLTC datasets, treating English as the source language and German, French, Japan and Chinese as the unlabeled target languages. The proposed approach had the advantageous or comparable performance of the other state-of-art methods.Comment: Accepted at ACL 2017; Code available at https://github.com/xrc10/cross-distil

Taming Wild High Dimensional Text Data with a Fuzzy Lash

The bag of words (BOW) represents a corpus in a matrix whose elements are the frequency of words. However, each row in the matrix is a very high-dimensional sparse vector. Dimension reduction (DR) is a popular method to address sparsity and high-dimensionality issues. Among different strategies to develop DR method, Unsupervised Feature Transformation (UFT) is a popular strategy to map all words on a new basis to represent BOW. The recent increase of text data and its challenges imply that DR area still needs new perspectives. Although a wide range of methods based on the UFT strategy has been developed, the fuzzy approach has not been considered for DR based on this strategy. This research investigates the application of fuzzy clustering as a DR method based on the UFT strategy to collapse BOW matrix to provide a lower-dimensional representation of documents instead of the words in a corpus. The quantitative evaluation shows that fuzzy clustering produces superior performance and features to Principal Components Analysis (PCA) and Singular Value Decomposition (SVD), two popular DR methods based on the UFT strategy

A Convex Relaxation for Weakly Supervised Classifiers

This paper introduces a general multi-class approach to weakly supervised classification. Inferring the labels and learning the parameters of the model is usually done jointly through a block-coordinate descent algorithm such as expectation-maximization (EM), which may lead to local minima. To avoid this problem, we propose a cost function based on a convex relaxation of the soft-max loss. We then propose an algorithm specifically designed to efficiently solve the corresponding semidefinite program (SDP). Empirically, our method compares favorably to standard ones on different datasets for multiple instance learning and semi-supervised learning as well as on clustering tasks.Comment: Appears in Proceedings of the 29th International Conference on Machine Learning (ICML 2012