8,682 research outputs found

    The equivalence of information-theoretic and likelihood-based methods for neural dimensionality reduction

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    Stimulus dimensionality-reduction methods in neuroscience seek to identify a low-dimensional space of stimulus features that affect a neuron's probability of spiking. One popular method, known as maximally informative dimensions (MID), uses an information-theoretic quantity known as "single-spike information" to identify this space. Here we examine MID from a model-based perspective. We show that MID is a maximum-likelihood estimator for the parameters of a linear-nonlinear-Poisson (LNP) model, and that the empirical single-spike information corresponds to the normalized log-likelihood under a Poisson model. This equivalence implies that MID does not necessarily find maximally informative stimulus dimensions when spiking is not well described as Poisson. We provide several examples to illustrate this shortcoming, and derive a lower bound on the information lost when spiking is Bernoulli in discrete time bins. To overcome this limitation, we introduce model-based dimensionality reduction methods for neurons with non-Poisson firing statistics, and show that they can be framed equivalently in likelihood-based or information-theoretic terms. Finally, we show how to overcome practical limitations on the number of stimulus dimensions that MID can estimate by constraining the form of the non-parametric nonlinearity in an LNP model. We illustrate these methods with simulations and data from primate visual cortex

    Electrostatic Field Classifier for Deficient Data

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    This paper investigates the suitability of recently developed models based on the physical field phenomena for classification problems with incomplete datasets. An original approach to exploiting incomplete training data with missing features and labels, involving extensive use of electrostatic charge analogy, has been proposed. Classification of incomplete patterns has been investigated using a local dimensionality reduction technique, which aims at exploiting all available information rather than trying to estimate the missing values. The performance of all proposed methods has been tested on a number of benchmark datasets for a wide range of missing data scenarios and compared to the performance of some standard techniques. Several modifications of the original electrostatic field classifier aiming at improving speed and robustness in higher dimensional spaces are also discussed
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