Simulation of hyperelastic materials in real-time using Deep Learning

The finite element method (FEM) is among the most commonly used numerical methods for solving engineering problems. Due to its computational cost, various ideas have been introduced to reduce computation times, such as domain decomposition, parallel computing, adaptive meshing, and model order reduction. In this paper we present U-Mesh: a data-driven method based on a U-Net architecture that approximates the non-linear relation between a contact force and the displacement field computed by a FEM algorithm. We show that deep learning, one of the latest machine learning methods based on artificial neural networks, can enhance computational mechanics through its ability to encode highly non-linear models in a compact form. Our method is applied to two benchmark examples: a cantilever beam and an L-shape subject to moving punctual loads. A comparison between our method and proper orthogonal decomposition (POD) is done through the paper. The results show that U-Mesh can perform very fast simulations on various geometries, mesh resolutions and number of input forces with very small errors

Predicting the Cancer Tumor Position in Liver Using Finite Element Analysis (FEA) and Artificial Intelligence (AI)

The computational power and advantages of the Finite Element Method (FEM) are noticeable. When dealing with high nonlinearity of the materials and geometrical complexity, FEM is a powerful solution, depending on the correct definition of the problem. The availability of this method has benefited many engineering areas. In the field of biomechanics and, more specifically, in Computer-Assisted Surgery, FEM is even more appreciated. This approach, however, comes at a high computational cost. Thus, a significant delay in the response impedes its implementation for real-time applications in clinical practices, even by using parallelization or utilizing Graphics Processing Unit (GPU). This is where an alternative approach is needed to accelerate FEM-based simulations to provide the desired outputs and minimizing the time lag, preventing using FEM during intra-operative applications. A novel technique that may help to overcome the obstacles mentioned above and improve the response time is the field of Machine Learning (ML). In particular, the Artificial Neural Network (ANN), as a subset of ML, has demonstrated high potentials in computer vision and pattern recognition, whose implementation can be extended to replace a FEM model once it has been trained with sufficient inputs. In this work, a FEM-ML framework is established to drastically increase the response time for predicting tumor and internal structures’ locations in the human liver for surgical applications by using ANN. This technique takes advantage of the FEM results to train a model capable of capturing large deformations of liver tissue during the surgical intervention while reporting back the nodal locations of the components with high accuracy and efficiency. For doing so, a biomechanical model of the liver, accounting for the effect of the stiffness of blood vessels, is developed, and multiple simulations with random nodal loads on the surface of the liver are conducted in the commercial software Abaqus to produce the input required for the ANN. The ANN then predicts the nodes’ coordinates resulting from the applied forces that can be used to reconstruct the deformed model of the organ

Nonlinear effects in finite elements analysis of colorectal surgical clamping

Minimal Invasive Surgery (MIS) is a procedure that has increased its applications in past few years in different types of surgeries. As number of application fields are increasing day by day, new issues have been arising. In particular, instruments must be inserted through a trocar to access the abdominal cavity without capability of direct manipulation of tissues, so a loss of sensitivity occurs. Generally speaking, the student of medicine or junior surgeons need a lot of practice hours before starting any surgical procedure, since they have to difficulty in acquiring specific skills (hand–eye coordination among others) for this type of surgery. Here is what the surgical simulator present a promising training method using an approach based on Finite Element Method (FEM). The use of continuum mechanics, especially Finite Element Analysis (FEA) has gained an extensive application in medical field in order to simulate soft tissues. In particular, colorectal simulations can be used to understand the interaction between colon and the surrounding tissues and also between colon and instruments. Although several works have been introduced considering small displacements, FEA applied to colorectal surgical procedures with large displacements is a topic that asks for more investigations. This work aims to investigate how FEA can describe non-linear effects induced by material properties and different approximating geometries, focusing as test-case application colorectal surgery. More in detail, it shows a comparison between simulations that are performed using both linear and hyperelastic models. These different mechanical behaviours are applied on different geometrical models (planar, cylindrical, 3D-SS and a real model from digital acquisitions 3D-S) with the aim of evaluating the effects of geometric non-linearity. Final aim of the research is to provide a preliminary contribution to the simulation of the interaction between surgical instrument and colon tissues with multi-purpose FEA in order to help the preliminary set-up of different bioengineering tasks like force-contact evaluation or approximated modelling for virtual reality (surgical simulations). In particular, the contribution of this work is focused on the sensitivity analysis of the nonlinearities by FEA in the tissue-tool interaction through an explicit FEA solver. By doing in this way, we aim to demonstrate that the set-up of FEA computational surgical tools may be simplified in order to provide assistance to non-expert FEA engineers or medicians in more precise way of using FEA tools

Evaluacion de modelos de aprendizaje profundo mediante redes neuronales guiadas por datos para materiales no lineales

Nonlinear materials are often difficult to model with classical methods like the FiniteElement Method, have a complex and sometimes inaccurate physical and mathematicaldescription or simply we do not know how to describe such materials in terms ofrelations between external and internal variables. In many disciplines, neural networkmethods have arisen as powerful tools to deal with nonlinear problems. In this work, thevery recently developed concept of Physically-Guided Neural Networks with InternalVariables (PGNNIV) is applied for nonlinear materials, providing us with a tool to addphysically meaningful constraints to deep neural networks from a model-free perspective.These latter outperform classical simulation methods in terms of computational powerfor the evaluation of the prediction of external and specially internal variables, sincethey are less computationally intensive and easily scalable. Furthermore, in comparisonwith classical neural networks, they lter numerical noise, have faster convergence, areless data demanding and can have improved extrapolation capacity. In addition, as theyare not based on conventional parametric models (model-free character), a reductionin the time required to develop material models is achieved compared to the use ofmethods such as Finite Elements. In this work, it is shown that the same PGNNIVis capable of achieving good results in the predictions regardless of the nature of theelastic material considered (linear, with hardening or softening behavior), being able tounravel the constitutive law of the material and explain its nature. The results showthat PGNNIV is a useful tool to deal with the problems of solid mechanics, both fromthe point of view of predicting the response to new load situations, and to explain thebehavior of materials, placing the method in what is known as Explainable ArticialIntelligence (XAI).<br /

Generative retrieval-augmented ontologic graph and multi-agent strategies for interpretive large language model-based materials design

Transformer neural networks show promising capabilities, in particular for uses in materials analysis, design and manufacturing, including their capacity to work effectively with both human language, symbols, code, and numerical data. Here we explore the use of large language models (LLMs) as a tool that can support engineering analysis of materials, applied to retrieving key information about subject areas, developing research hypotheses, discovery of mechanistic relationships across disparate areas of knowledge, and writing and executing simulation codes for active knowledge generation based on physical ground truths. When used as sets of AI agents with specific features, capabilities, and instructions, LLMs can provide powerful problem solution strategies for applications in analysis and design problems. Our experiments focus on using a fine-tuned model, MechGPT, developed based on training data in the mechanics of materials domain. We first affirm how finetuning endows LLMs with reasonable understanding of domain knowledge. However, when queried outside the context of learned matter, LLMs can have difficulty to recall correct information. We show how this can be addressed using retrieval-augmented Ontological Knowledge Graph strategies that discern how the model understands what concepts are important and how they are related. Illustrated for a use case of relating distinct areas of knowledge - here, music and proteins - such strategies can also provide an interpretable graph structure with rich information at the node, edge and subgraph level. We discuss nonlinear sampling strategies and agent-based modeling applied to complex question answering, code generation and execution in the context of automated force field development from actively learned Density Functional Theory (DFT) modeling, and data analysis

Polyconvex anisotropic hyperelasticity with neural networks

In the present work, two machine learning based constitutive models for finite deformations are proposed. Using input convex neural networks, the models are hyperelastic, anisotropic and fulfill the polyconvexity condition, which implies ellipticity and thus ensures material stability. The first constitutive model is based on a set of polyconvex, anisotropic and objective invariants. The second approach is formulated in terms of the deformation gradient, its cofactor and determinant, uses group symmetrization to fulfill the material symmetry condition, and data augmentation to fulfill objectivity approximately. The extension of the dataset for the data augmentation approach is based on mechanical considerations and does not require additional experimental or simulation data. The models are calibrated with highly challenging simulation data of cubic lattice metamaterials, including finite deformations and lattice instabilities. A moderate amount of calibration data is used, based on deformations which are commonly applied in experimental investigations. While the invariant-based model shows drawbacks for several deformation modes, the model based on the deformation gradient alone is able to reproduce and predict the effective material behavior very well and exhibits excellent generalization capabilities. In addition, the models are calibrated with transversely isotropic data, generated with an analytical polyconvex potential. For this case, both models show excellent results, demonstrating the straightforward applicability of the polyconvex neural network constitutive models to other symmetry groups