162,230 research outputs found

    Multi-level agent-based modeling - A literature survey

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    During last decade, multi-level agent-based modeling has received significant and dramatically increasing interest. In this article we present a comprehensive and structured review of literature on the subject. We present the main theoretical contributions and application domains of this concept, with an emphasis on social, flow, biological and biomedical models.Comment: v2. Ref 102 added. v3-4 Many refs and text added v5-6 bibliographic statistics updated. v7 Change of the name of the paper to reflect what it became, many refs and text added, bibliographic statistics update

    Physics-related epistemic uncertainties in proton depth dose simulation

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    A set of physics models and parameters pertaining to the simulation of proton energy deposition in matter are evaluated in the energy range up to approximately 65 MeV, based on their implementations in the Geant4 toolkit. The analysis assesses several features of the models and the impact of their associated epistemic uncertainties, i.e. uncertainties due to lack of knowledge, on the simulation results. Possible systematic effects deriving from uncertainties of this kind are highlighted; their relevance in relation to the application environment and different experimental requirements are discussed, with emphasis on the simulation of radiotherapy set-ups. By documenting quantitatively the features of a wide set of simulation models and the related intrinsic uncertainties affecting the simulation results, this analysis provides guidance regarding the use of the concerned simulation tools in experimental applications; it also provides indications for further experimental measurements addressing the sources of such uncertainties.Comment: To be published in IEEE Trans. Nucl. Sc

    Data-driven modelling of biological multi-scale processes

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    Biological processes involve a variety of spatial and temporal scales. A holistic understanding of many biological processes therefore requires multi-scale models which capture the relevant properties on all these scales. In this manuscript we review mathematical modelling approaches used to describe the individual spatial scales and how they are integrated into holistic models. We discuss the relation between spatial and temporal scales and the implication of that on multi-scale modelling. Based upon this overview over state-of-the-art modelling approaches, we formulate key challenges in mathematical and computational modelling of biological multi-scale and multi-physics processes. In particular, we considered the availability of analysis tools for multi-scale models and model-based multi-scale data integration. We provide a compact review of methods for model-based data integration and model-based hypothesis testing. Furthermore, novel approaches and recent trends are discussed, including computation time reduction using reduced order and surrogate models, which contribute to the solution of inference problems. We conclude the manuscript by providing a few ideas for the development of tailored multi-scale inference methods.Comment: This manuscript will appear in the Journal of Coupled Systems and Multiscale Dynamics (American Scientific Publishers

    History and development of validation with the ESP-r simulation program

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    It is well recognised that validation of dynamic building simulation programs is a long-term complex task. There have been many large national and international efforts that have led to a well-established validation methodology comprising analytical, inter-program comparison and empirical validation elements, and a significant number of tests have been developed. As simulation usage increases, driven by such initiatives as the European Energy Performance of Buildings Directive, such tests are starting to be incorporated into national and international standards. Although many program developers have run many of the developed tests, there does not appear to have been a systematic attempt to incorporate such tests into routine operation of the simulation programs. This paper reports work undertaken to address this deficiency. The paper summarizes the tests that have been applied to the simulation program ESP-r. These tests have been developed within International Energy Agency Annexes, within CEN standards, within various large-scale national projects, and by the UK's Chartered Institution of Building Services Engineers. The structure used to encapsulate the tests allows developers to ensure that recent code modifications have not resulted in unforeseen impacts on program predictions, and allows users to check for themselves against benchmarks

    CFD Applications in Energy Engineering Research and Simulation: An Introduction to Published Reviews

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    Computational Fluid Dynamics (CFD) has been firmly established as a fundamental discipline to advancing research on energy engineering. The major progresses achieved during the last two decades both on software modelling capabilities and hardware computing power have resulted in considerable and widespread CFD interest among scientist and engineers. Numerical modelling and simulation developments are increasingly contributing to the current state of the art in many energy engineering aspects, such as power generation, combustion, wind energy, concentrated solar power, hydro power, gas and steam turbines, fuel cells, and many others. This review intends to provide an overview of the CFD applications in energy and thermal engineering, as a presentation and background for the Special Issue “CFD Applications in Energy Engineering Research and Simulation” published by Processes in 2020. A brief introduction to the most significant reviews that have been published on the particular topics is provided. The objective is to provide an overview of the CFD applications in energy and thermal engineering, highlighting the review papers published on the different topics, so that readers can refer to the different review papers for a thorough revision of the state of the art and contributions into the particular field of interest

    Impact of Compositional Grading and Component Lumping on Ultimate Recovery

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    A Novel Chronic Disease Policy Model

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    We develop a simulation tool to support policy-decisions about healthcare for chronic diseases in defined populations. Incident disease-cases are generated in-silico from an age-sex characterised general population using standard epidemiological approaches. A novel disease-treatment model then simulates continuous life courses for each patient using discrete event simulation. Ideally, the discrete event simulation model would be inferred from complete longitudinal healthcare data via a likelihood or Bayesian approach. Such data is seldom available for relevant populations, therefore an innovative approach to evidence synthesis is required. We propose a novel entropy-based approach to fit survival densities. This method provides a fully flexible way to incorporate the available information, which can be derived from arbitrary sources. Discrete event simulation then takes place on the fitted model using a competing hazards framework. The output is then used to help evaluate the potential impacts of policy options for a given population.Comment: 24 pages, 13 figures, 11 table
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