13,312 research outputs found

    The self-organization of combinatoriality and phonotactics in vocalization systems

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    This paper shows how a society of agents can self-organize a shared vocalization system that is discrete, combinatorial and has a form of primitive phonotactics, starting from holistic inarticulate vocalizations. The originality of the system is that: (1) it does not include any explicit pressure for communication; (2) agents do not possess capabilities of coordinated interactions, in particular they do not play language games; (3) agents possess no specific linguistic capacities; and (4) initially there exists no convention that agents can use. As a consequence, the system shows how a primitive speech code may bootstrap in the absence of a communication system between agents, i.e. before the appearance of language

    A combined measure for quantifying and qualifying the topology preservation of growing self-organizing maps

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    The Self-OrganizingMap (SOM) is a neural network model that performs an ordered projection of a high dimensional input space in a low-dimensional topological structure. The process in which such mapping is formed is defined by the SOM algorithm, which is a competitive, unsupervised and nonparametric method, since it does not make any assumption about the input data distribution. The feature maps provided by this algorithm have been successfully applied for vector quantization, clustering and high dimensional data visualization processes. However, the initialization of the network topology and the selection of the SOM training parameters are two difficult tasks caused by the unknown distribution of the input signals. A misconfiguration of these parameters can generate a feature map of low-quality, so it is necessary to have some measure of the degree of adaptation of the SOM network to the input data model. The topologypreservation is the most common concept used to implement this measure. Several qualitative and quantitative methods have been proposed for measuring the degree of SOM topologypreservation, particularly using Kohonen's model. In this work, two methods for measuring the topologypreservation of the Growing Cell Structures (GCSs) model are proposed: the topographic function and the topology preserving ma

    Brain Dynamics across levels of Organization

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    After presenting evidence that the electrical activity recorded from the brain surface can reflect metastable state transitions of neuronal configurations at the mesoscopic level, I will suggest that their patterns may correspond to the distinctive spatio-temporal activity in the Dynamic Core (DC) and the Global Neuronal Workspace (GNW), respectively, in the models of the Edelman group on the one hand, and of Dehaene-Changeux, on the other. In both cases, the recursively reentrant activity flow in intra-cortical and cortical-subcortical neuron loops plays an essential and distinct role. Reasons will be given for viewing the temporal characteristics of this activity flow as signature of Self-Organized Criticality (SOC), notably in reference to the dynamics of neuronal avalanches. This point of view enables the use of statistical Physics approaches for exploring phase transitions, scaling and universality properties of DC and GNW, with relevance to the macroscopic electrical activity in EEG and EMG

    Metastability, Criticality and Phase Transitions in brain and its Models

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    This essay extends the previously deposited paper "Oscillations, Metastability and Phase Transitions" to incorporate the theory of Self-organizing Criticality. The twin concepts of Scaling and Universality of the theory of nonequilibrium phase transitions is applied to the role of reentrant activity in neural circuits of cerebral cortex and subcortical neural structures

    Oscillations, metastability and phase transitions in brain and models of cognition

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    Neuroscience is being practiced in many different forms and at many different organizational levels of the Nervous System. Which of these levels and associated conceptual frameworks is most informative for elucidating the association of neural processes with processes of Cognition is an empirical question and subject to pragmatic validation. In this essay, I select the framework of Dynamic System Theory. Several investigators have applied in recent years tools and concepts of this theory to interpretation of observational data, and for designing neuronal models of cognitive functions. I will first trace the essentials of conceptual development and hypotheses separately for discerning observational tests and criteria for functional realism and conceptual plausibility of the alternatives they offer. I will then show that the statistical mechanics of phase transitions in brain activity, and some of its models, provides a new and possibly revealing perspective on brain events in cognition

    Information visualization for DNA microarray data analysis: A critical review

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    Graphical representation may provide effective means of making sense of the complexity and sheer volume of data produced by DNA microarray experiments that monitor the expression patterns of thousands of genes simultaneously. The ability to use ldquoabstractrdquo graphical representation to draw attention to areas of interest, and more in-depth visualizations to answer focused questions, would enable biologists to move from a large amount of data to particular records they are interested in, and therefore, gain deeper insights in understanding the microarray experiment results. This paper starts by providing some background knowledge of microarray experiments, and then, explains how graphical representation can be applied in general to this problem domain, followed by exploring the role of visualization in gene expression data analysis. Having set the problem scene, the paper then examines various multivariate data visualization techniques that have been applied to microarray data analysis. These techniques are critically reviewed so that the strengths and weaknesses of each technique can be tabulated. Finally, several key problem areas as well as possible solutions to them are discussed as being a source for future work

    Neural Network Aided Glitch-Burst Discrimination and Glitch Classification

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    We investigate the potential of neural-network based classifiers for discriminating gravitational wave bursts (GWBs) of a given canonical family (e.g. core-collapse supernova waveforms) from typical transient instrumental artifacts (glitches), in the data of a single detector. The further classification of glitches into typical sets is explored.In order to provide a proof of concept,we use the core-collapse supernova waveform catalog produced by H. Dimmelmeier and co-Workers, and the data base of glitches observed in laser interferometer gravitational wave observatory (LIGO) data maintained by P. Saulson and co-Workers to construct datasets of (windowed) transient waveforms (glitches and bursts) in additive (Gaussian and compound-Gaussian) noise with different signal-tonoise ratios (SNR). Principal component analysis (PCA) is next implemented for reducing data dimensionality, yielding results consistent with, and extending those in the literature. Then, a multilayer perceptron is trained by a backpropagation algorithm (MLP-BP) on a data subset, and used to classify the transients as glitch or burst. A Self-Organizing Map (SOM) architecture is finally used to classify the glitches. The glitch/burst discrimination and glitch classification abilities are gauged in terms of the related truth tables. Preliminary results suggest that the approach is effective and robust throughout the SNR range of practical interest. Perspective applications pertain both to distributed (network, multisensor) detection of GWBs, where someintelligenceat the single node level can be introduced, and instrument diagnostics/optimization, where spurious transients can be identified, classified and hopefully traced back to their entry point

    Fractals in the Nervous System: conceptual Implications for Theoretical Neuroscience

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    This essay is presented with two principal objectives in mind: first, to document the prevalence of fractals at all levels of the nervous system, giving credence to the notion of their functional relevance; and second, to draw attention to the as yet still unresolved issues of the detailed relationships among power law scaling, self-similarity, and self-organized criticality. As regards criticality, I will document that it has become a pivotal reference point in Neurodynamics. Furthermore, I will emphasize the not yet fully appreciated significance of allometric control processes. For dynamic fractals, I will assemble reasons for attributing to them the capacity to adapt task execution to contextual changes across a range of scales. The final Section consists of general reflections on the implications of the reviewed data, and identifies what appear to be issues of fundamental importance for future research in the rapidly evolving topic of this review
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