Improving Usability And Scalability Of Big Data Workflows In The Cloud

Big data workflows have recently emerged as the next generation of data-centric workflow technologies to address the five “V” challenges of big data: volume, variety, velocity, veracity, and value. More formally, a big data workflow is the computerized modeling and automation of a process consisting of a set of computational tasks and their data interdependencies to process and analyze data of ever increasing in scale, complexity, and rate of acquisition. The convergence of big data and workflows creates new challenges in workflow community. First, the variety of big data results in a need for integrating large number of remote Web services and other heterogeneous task components that can consume and produce data in various formats and models into a uniform and interoperable workflow. Existing approaches fall short in addressing the so-called shimming problem only in an adhoc manner and unable to provide a generic solution. We automatically insert a piece of code called shims or adaptors in order to resolve the data type mismatches. Second, the volume of big data results in a large number of datasets that needs to be queried and analyzed in an effective and personalized manner. Further, there is also a strong need for sharing, reusing, and repurposing existing tasks and workflows across different users and institutes. To overcome such limitations, we propose a folksonomy- based social workflow recommendation system to improve workflow design productivity and efficient dataset querying and analyzing. Third, the volume of big data results in the need to process and analyze data of ever increasing in scale, complexity, and rate of acquisition. But a scalable distributed data model is still missing that abstracts and automates data distribution, parallelism, and scalable processing. We propose a NoSQL collectional data model that addresses this limitation. Finally, the volume of big data combined with the unbound resource leasing capability foreseen in the cloud, facilitates data scientists to wring actionable insights from the data in a time and cost efficient manner. We propose BARENTS scheduler that supports high-performance workflow scheduling in a heterogeneous cloud-computing environment with a single objective to minimize the workflow makespan under a user provided budget constraint

Information Retrieval Service Aspects of the Open Research Knowledge Graph

Information Retrieval (IR) takes a fresh perspective in the context of the next-generation digital libraries such as the Open Research Knowledge Graph (ORKG). As scholarly digital libraries evolve from document-based to knowledge-graph-based representations of content, there is a need for their information technology services to suitably adapt as well. The ORKG enables a structured representation of scholarly contributions data as RDF triples - in turn, it fosters FAIR (Findable, Accessible, Interoperable, and Reusable) scholarly contributions. This thesis has practically examined three different IR service aspects in the ORKG with the aim to help users: (i) easily find and compare relevant scholarly contributions; and (ii) structure new contributions in a manner consistent to the existing ORKG knowledge base of structured contributions. In the first part, it will evaluate and enhance the performance of the default ORKG “Contributions Similarity Service.” An optimal representation of contributions as documents obtains better retrieval performance of the BM25 algorithm in Elasticsearch. To achieve this, evaluation datasets were created and the contributions search index reinitialized with the new documents. In its second part, this thesis will introduce a “Templates Recommendation Service.” Two approaches were tested. A supervised approach with a Natural Language Inference (NLI) objective that tries to infer a contribution template for a given paper if one exists or none. And an unsupervised approach based on search that tries to return the most relevant template for a queried paper. Our experiments favoring ease of practical installation resulted in the conclusion that the unsupervised approach was better suited to the task. In a third and final part, a “Grouped Predicates Recommendation Service” will be introduced. Inspired from prior work, the service implements K-Means clustering with an IR spin. Similar structured papers are grouped, their in-cluster predicate groups computed, and new papers are semantified based on the predicate groups of the most similar cluster. The resulting micro-averaged F-measure of 65.5% using TF-IDF vectors has shown a sufficient homogeneity in the clusters

Knowledge Extraction from Textual Resources through Semantic Web Tools and Advanced Machine Learning Algorithms for Applications in Various Domains

Nowadays there is a tremendous amount of unstructured data, often represented by texts, which is created and stored in variety of forms in many domains such as patients' health records, social networks comments, scientific publications, and so on. This volume of data represents an invaluable source of knowledge, but unfortunately it is challenging its mining for machines. At the same time, novel tools as well as advanced methodologies have been introduced in several domains, improving the efficacy and the efficiency of data-based services. Following this trend, this thesis shows how to parse data from text with Semantic Web based tools, feed data into Machine Learning methodologies, and produce services or resources to facilitate the execution of some tasks. More precisely, the use of Semantic Web technologies powered by Machine Learning algorithms has been investigated in the Healthcare and E-Learning domains through not yet experimented methodologies. Furthermore, this thesis investigates the use of some state-of-the-art tools to move data from texts to graphs for representing the knowledge contained in scientific literature. Finally, the use of a Semantic Web ontology and novel heuristics to detect insights from biological data in form of graph are presented. The thesis contributes to the scientific literature in terms of results and resources. Most of the material presented in this thesis derives from research papers published in international journals or conference proceedings

A cloud-based remote sensing data production system

The data processing capability of existing remote sensing system has not kept pace with the amount of data typically received and need to be processed. Existing product services are not capable of providing users with a variety of remote sensing data sources for selection, either. Therefore, in this paper, we present a product generation programme using multisource remote sensing data, across distributed data centers in a cloud environment, so as to compensate for the low productive efficiency, less types and simple services of the existing system. The programme adopts “master–slave” architecture. Specifically, the master center is mainly responsible for the production order receiving and parsing, as well as task and data scheduling, results feedback, and so on; the slave centers are the distributed remote sensing data centers, which storage one or more types of remote sensing data, and mainly responsible for production task execution. In general, each production task only runs on one data center, and the data scheduling among centers adopts a “minimum data transferring” strategy. The logical workflow of each production task is organized based on knowledge base, and then turned into the actual executed workflow by Kepler. In addition, the scheduling strategy of each production task mainly depends on the Ganglia monitoring results, thus the computing resources can be allocated or expanded adaptively. Finally, we evaluated the proposed programme using test experiments performed at global, regional and local areas, and the results showed that our proposed cloud-based remote sensing production system could deal with massive remote sensing data and different products generating, as well as on-demand remote sensing computing and information service

Arquitectura, técnicas y modelos para posibilitar la Ciencia de Datos en el Archivo de la Misión Gaia

Tesis inédita de la Universidad Complutense de Madrid, Facultad de Informática, Departamento de Arquitectura de Computadores y Automática, leída el 26/05/2017.The massive amounts of data that the world produces every day pose new challenges to modern societies in terms of how to leverage their inherent value. Social networks, instant messaging, video, smart devices and scientific missions are just mere examples of the vast number of sources generating data every second. As the world becomes more and more digitalized, new needs arise for organizing, archiving, sharing, analyzing, visualizing and protecting the ever-increasing data sets, so that we can truly develop into a data-driven economy that reduces inefficiencies and increases sustainability, creating new business opportunities on the way. Traditional approaches for harnessing data are not suitable any more as they lack the means for scaling to the larger volumes in a timely and cost efficient manner. This has somehow changed with the advent of Internet companies like Google and Facebook, which have devised new ways of tackling this issue. However, the variety and complexity of the value chains in the private sector as well as the increasing demands and constraints in which the public one operates, needs an ongoing research that can yield newer strategies for dealing with data, facilitate the integration of providers and consumers of information, and guarantee a smooth and prompt transition when adopting these cutting-edge technological advances. This thesis aims at providing novel architectures and techniques that will help perform this transition towards Big Data in massive scientific archives. It highlights the common pitfalls that must be faced when embracing it and how to overcome them, especially when the data sets, their transformation pipelines and the tools used for the analysis are already present in the organizations. Furthermore, a new perspective for facilitating a smoother transition is laid out. It involves the usage of higher-level and use case specific frameworks and models, which will naturally bridge the gap between the technological and scientific domains. This alternative will effectively widen the possibilities of scientific archives and therefore will contribute to the reduction of the time to science. The research will be applied to the European Space Agency cornerstone mission Gaia, whose final data archive will represent a tremendous discovery potential. It will create the largest and most precise three dimensional chart of our galaxy (the Milky Way), providing unprecedented position, parallax and proper motion measurements for about one billion stars. The successful exploitation of this data archive will depend to a large degree on the ability to offer the proper architecture, i.e. infrastructure and middleware, upon which scientists will be able to do exploration and modeling with this huge data set. In consequence, the approach taken needs to enable data fusion with other scientific archives, as this will produce the synergies leading to an increment in scientific outcome, both in volume and in quality. The set of novel techniques and frameworks presented in this work addresses these issues by contextualizing them with the data products that will be generated in the Gaia mission. All these considerations have led to the foundations of the architecture that will be leveraged by the Science Enabling Applications Work Package. Last but not least, the effectiveness of the proposed solution will be demonstrated through the implementation of some ambitious statistical problems that will require significant computational capabilities, and which will use Gaia-like simulated data (the first Gaia data release has recently taken place on September 14th, 2016). These ambitious problems will be referred to as the Grand Challenge, a somewhat grandiloquent name that consists in inferring a set of parameters from a probabilistic point of view for the Initial Mass Function (IMF) and Star Formation Rate (SFR) of a given set of stars (with a huge sample size), from noisy estimates of their masses and ages respectively. This will be achieved by using Hierarchical Bayesian Modeling (HBM). In principle, the HBM can incorporate stellar evolution models to infer the IMF and SFR directly, but in this first step presented in this thesis, we will start with a somewhat less ambitious goal: inferring the PDMF and PDAD. Moreover, the performance and scalability analyses carried out will also prove the suitability of the models for the large amounts of data that will be available in the Gaia data archive.Las grandes cantidades de datos que se producen en el mundo diariamente plantean nuevos retos a la sociedad en términos de cómo extraer su valor inherente. Las redes sociales, mensajería instantánea, los dispositivos inteligentes y las misiones científicas son meros ejemplos del gran número de fuentes generando datos en cada momento. Al mismo tiempo que el mundo se digitaliza cada vez más, aparecen nuevas necesidades para organizar, archivar, compartir, analizar, visualizar y proteger la creciente cantidad de datos, para que podamos desarrollar economías basadas en datos e información que sean capaces de reducir las ineficiencias e incrementar la sostenibilidad, creando nuevas oportunidades de negocio por el camino. La forma en la que se han manejado los datos tradicionalmente no es la adecuada hoy en día, ya que carece de los medios para escalar a los volúmenes más grandes de datos de una forma oportuna y eficiente. Esto ha cambiado de alguna manera con la llegada de compañías que operan en Internet como Google o Facebook, ya que han concebido nuevas aproximaciones para abordar el problema. Sin embargo, la variedad y complejidad de las cadenas de valor en el sector privado y las crecientes demandas y limitaciones en las que el sector público opera, necesitan una investigación continua en la materia que pueda proporcionar nuevas estrategias para procesar las enormes cantidades de datos, facilitar la integración de productores y consumidores de información, y garantizar una transición rápida y fluida a la hora de adoptar estos avances tecnológicos innovadores. Esta tesis tiene como objetivo proporcionar nuevas arquitecturas y técnicas que ayudarán a realizar esta transición hacia Big Data en archivos científicos masivos. La investigación destaca los escollos principales a encarar cuando se adoptan estas nuevas tecnologías y cómo afrontarlos, principalmente cuando los datos y las herramientas de transformación utilizadas en el análisis existen en la organización. Además, se exponen nuevas medidas para facilitar una transición más fluida. Éstas incluyen la utilización de software de alto nivel y específico al caso de uso en cuestión, que haga de puente entre el dominio científico y tecnológico. Esta alternativa ampliará de una forma efectiva las posibilidades de los archivos científicos y por tanto contribuirá a la reducción del tiempo necesario para generar resultados científicos a partir de los datos recogidos en las misiones de astronomía espacial y planetaria. La investigación se aplicará a la misión de la Agencia Espacial Europea (ESA) Gaia, cuyo archivo final de datos presentará un gran potencial para el descubrimiento y hallazgo desde el punto de vista científico. La misión creará el catálogo en tres dimensiones más grande y preciso de nuestra galaxia (la Vía Láctea), proporcionando medidas sin precedente acerca del posicionamiento, paralaje y movimiento propio de alrededor de mil millones de estrellas. Las oportunidades para la explotación exitosa de este archivo de datos dependerán en gran medida de la capacidad de ofrecer la arquitectura adecuada, es decir infraestructura y servicios, sobre la cual los científicos puedan realizar la exploración y modelado con esta inmensa cantidad de datos. Por tanto, la estrategia a realizar debe ser capaz de combinar los datos con otros archivos científicos, ya que esto producirá sinergias que contribuirán a un incremento en la ciencia producida, tanto en volumen como en calidad de la misma. El conjunto de técnicas e infraestructuras innovadoras presentadas en este trabajo aborda estos problemas, contextualizándolos con los productos de datos que se generarán en la misión Gaia. Todas estas consideraciones han conducido a los fundamentos de la arquitectura que se utilizará en el paquete de trabajo de aplicaciones que posibilitarán la ciencia en el archivo de la misión Gaia (Science Enabling Applications). Por último, la eficacia de la solución propuesta se demostrará a través de la implementación de dos problemas estadísticos que requerirán cantidades significativas de cómputo, y que usarán datos simulados en el mismo formato en el que se producirán en el archivo de la misión Gaia (la primera versión de datos recogidos por la misión está disponible desde el día 14 de Septiembre de 2016). Estos ambiciosos problemas representan el Gran Reto (Grand Challenge), un nombre grandilocuente que consiste en inferir una serie de parámetros desde un punto de vista probabilístico para la función de masa inicial (Initial Mass Function) y la tasa de formación estelar (Star Formation Rate) dado un conjunto de estrellas (con una muestra grande), desde estimaciones con ruido de sus masas y edades respectivamente. Esto se abordará utilizando modelos jerárquicos bayesianos (Hierarchical Bayesian Modeling). Enprincipio,losmodelospropuestos pueden incorporar otros modelos de evolución estelar para inferir directamente la función de masa inicial y la tasa de formación estelar, pero en este primer paso presentado en esta tesis, empezaremos con un objetivo algo menos ambicioso: la inferencia de la función de masa y distribución de edades actual (Present-Day Mass Function y Present-Day Age Distribution respectivamente). Además, se llevará a cabo el análisis de rendimiento y escalabilidad para probar la idoneidad de la implementación de dichos modelos dadas las enormes cantidades de datos que estarán disponibles en el archivo de la misión Gaia...Depto. de Arquitectura de Computadores y AutomáticaFac. de InformáticaTRUEunpu

Adjoining Internet of Things with Data Mining : A Survey

The Interactive Data Corporative (IDC) conjectures that by 2025 the worldwide data circle will develop to 163ZB (that is a trillion gigabytes) which is ten times the 16.1ZB of information produced in 2016. The Internet of Things is one of the hot topics of this living century and researchers are heading for mass adoption 2019 driven by better than-expected business results. This information will open one of a kind of user experience and another universe of business opening. The huge information produced by the Internet of Things (IoT) are considered of high business esteem, and information mining calculations can be connected to IoT to extract hidden data from information. This paper concisely discusses the work done in sequential manner of time in different fields of IOT along with its outcome and research gap. This paper also discusses the various aspects of data mining functionalities with IOT. The recommendation for the Challenges in IOT that can be adopted for betterment is given. Finally, this paper presents the vision for how IOT will have impact on changing the distant futur