CGIAR Platform for Big Data in Agriculture - Plan of Work and Budget 2021

The CGIAR Platform for Big Data in Agriculture is a cross-cutting program of the global CGIAR consortium of non-profit research institutes looking into virtually every aspect of food security spanning: genomics, breeding, agroecology, climate science, and the socioeconomic drivers and context of food systems change. The Platform tends to data standards and data sharing, digital innovation strategy and technology transfer, and research into the intersection of digital technologies and agricultural development in emerging regions

The Right Tools for the Job: The Case for Spatial Science Tool-Building

This paper was presented as the 8th annual Transactions in GIS plenary address at the American Association of Geographers annual meeting in Washington, DC. The spatial sciences have recently seen growing calls for more accessible software and tools that better embody geographic science and theory. Urban spatial network science offers one clear opportunity: from multiple perspectives, tools to model and analyze nonplanar urban spatial networks have traditionally been inaccessible, atheoretical, or otherwise limiting. This paper reflects on this state of the field. Then it discusses the motivation, experience, and outcomes of developing OSMnx, a tool intended to help address this. Next it reviews this tool's use in the recent multidisciplinary spatial network science literature to highlight upstream and downstream benefits of open-source software development. Tool-building is an essential but poorly incentivized component of academic geography and social science more broadly. To conduct better science, we need to build better tools. The paper concludes with paths forward, emphasizing open-source software and reusable computational data science beyond mere reproducibility and replicability

LiFT: A Scalable Framework for Measuring Fairness in ML Applications

Many internet applications are powered by machine learned models, which are usually trained on labeled datasets obtained through either implicit / explicit user feedback signals or human judgments. Since societal biases may be present in the generation of such datasets, it is possible for the trained models to be biased, thereby resulting in potential discrimination and harms for disadvantaged groups. Motivated by the need for understanding and addressing algorithmic bias in web-scale ML systems and the limitations of existing fairness toolkits, we present the LinkedIn Fairness Toolkit (LiFT), a framework for scalable computation of fairness metrics as part of large ML systems. We highlight the key requirements in deployed settings, and present the design of our fairness measurement system. We discuss the challenges encountered in incorporating fairness tools in practice and the lessons learned during deployment at LinkedIn. Finally, we provide open problems based on practical experience.Comment: Accepted for publication in CIKM 202

Addendum to Informatics for Health 2017: Advancing both science and practice

This article presents presentation and poster abstracts that were mistakenly omitted from the original publication

What is a Good Pattern of Life Model? Guidance for Simulations

We have been modeling an ever-increasing scale of applications with agents that simulate the pattern of life (PoL) and real-world human behaviors in diverse regions of the world. The goal is to support sociocultural training and analysis. To measure progress, we propose the definition of a measure of goodness for such simulated agents, and review the issues and challenges associated with first-generation (1G) agents. Then we present a second generation (2G) agent hybrid approach that seeks to improve realism in terms of emergent daily activities, social awareness, and micro-decision making in simulations. We offer a PoL case study with a mix of 1G and 2G approaches that was able to replace the pucksters and avatar operators needed in large-scale immersion exercises. We conclude by observing that a 1G PoL simulation might still be best where large-scale, pre-scripted training scenarios will suffice, while the 2G approach will be important for analysis or if it is vital to learn about adaptive opponents or unexpected or emergent effects of actions. Lessons are shared about ways to blend 1G and 2G approaches to get the best of each