Retrieval of canopy component temperatures through Bayesian inversion of directional thermal measurements

Evapotranspiration is usually estimated in remote sensing from single temperature value representing both soil and vegetation. This surface temperature is an aggregate over multiple canopy components. The temperature of the individual components can differ significantly, introducing errors in the evapotranspiration estimations. The temperature aggregate has a high level of directionality. An inversion method is presented in this paper to retrieve four canopy component temperatures from directional brightness temperatures. The Bayesian method uses both a priori information and sensor characteristics to solve the ill-posed inversion problem. The method is tested using two case studies: 1) a sensitivity analysis, using a large forward simulated dataset, and 2) in a reality study, using two datasets of two field campaigns. The results of the sensitivity analysis show that the Bayesian approach is able to retrieve the four component temperatures from directional brightness temperatures with good success rates using multi-directional sensors (Srspectra˜0.3, Srgonio˜0.3, and SrAATSR˜0.5), and no improvement using mono-angular sensors (Sr˜1). The results of the experimental study show that the approach gives good results for high LAI values (RMSEgrass=0.50 K, RMSEwheat=0.29 K, RMSEsugar beet=0.75 K, RMSEbarley=0.67 K); but for low LAI values the results were unsatisfactory (RMSEyoung maize=2.85 K). This discrepancy was found to originate from the presence of the metallic construction of the setup. As these disturbances, were only present for two crops and were not present in the sensitivity analysis, which had a low LAI, it is concluded that using masked thermal images will eliminate this discrepanc

Potential of using remote sensing techniques for global assessment of water footprint of crops

Remote sensing has long been a useful tool in global applications, since it provides physically-based, worldwide, and consistent spatial information. This paper discusses the potential of using these techniques in the research field of water management, particularly for ‘Water Footprint’ (WF) studies. The WF of a crop is defined as the volume of water consumed for its production, where green and blue WF stand for rain and irrigation water usage, respectively. In this paper evapotranspiration, precipitation, water storage, runoff and land use are identified as key variables to potentially be estimated by remote sensing and used for WF assessment. A mass water balance is proposed to calculate the volume of irrigation applied, and green and blue WF are obtained from the green and blue evapotranspiration components. The source of remote sensing data is described and a simplified example is included, which uses evapotranspiration estimates from the geostationary satellite Meteosat 9 and precipitation estimates obtained with the Climatic Prediction Center Morphing Technique (CMORPH). The combination of data in this approach brings several limitations with respect to discrepancies in spatial and temporal resolution and data availability, which are discussed in detail. This work provides new tools for global WF assessment and represents an innovative approach to global irrigation mapping, enabling the estimation of green and blue water use

Automated Directional Measurement System for the Acquisition of Thermal Radiative Measurements of Vegetative Canopies

The potential for directional optical and thermal imagery is very large. Field measurements have been performed with a goniometer on which thermal instruments were attached. In order to reduce dynamical effects the goniometer was adjusted to run in automated mode, for zenith and azimuthal direction. Directional measurements were performed over various crops with increasing heterogeneity. The improvements to the goniometer proved successful. For all the crops, except the vineyard, the acquisition of the directional thermal brightness temperatures of the crops went successfully. The large scale heterogeneity of the vineyard proved to be larger then the goniometer was capable of. The potential of directional thermal brightness temperatures has been proven

Integrated approach of remote sensing and micro-sensor technology for estimating evapotranspiration in Cyprus

 Papadavid George1,2, Hadjimitsis Diofantos1(1. Cyprus University of Technology, Cyprus;  2. Agricultural Research Institute, Cyprus) Abstract: The objective of this research project is to describe and apply a procedure for monitoring and improving the performance of on-demand irrigation networks, based on the integration of remote sensing techniques and simulation modeling of irrigation water in Cyprus, which is facing a severe drought in the last five years.  Multi-spectral satellite images are used to infer crop potential evapotranspiration, which is the main input for water balance simulations.  The need for estimating ET in Cyprus is imposed in order to determine the exact quantity of irrigated water needed for each specific crop.  The overuse of water for irrigation has resulted in eliminating the water resources in the whole island.  The determination of ET for irrigation purposes will be used as a vital tool for supporting the decision-making process in the management of water resources, on a technocratic level, and on the other hand will have a positive effect on the rest of water resources of Cyprus.  The integrated method applied, consisting of Remote Sensing techniques and micro-sensor technology, has shown that it can be a useful tool in the hands of agri-policy makers for sustainable irrigation.Keywords: remote sensing, wireless sensors, irrigation management, sustainability Citation: Papadavid George, Hadjimitsis Diofantos.  Integrated approach of remote sensing and micro-sensor technology for estimating evapotranspiration in Cyprus.  Agric Eng Int: CIGR Journal, 2010, 12(3): 1-11.   &nbsp

Monitoring crops water needs at high spatio-temporal resolution by synergy of optical/thermal and radar observations

L'optimisation de la gestion de l'eau en agriculture est essentielle dans les zones semi-arides afin de préserver les ressources en eau qui sont déjà faibles et erratiques dues à des actions humaines et au changement climatique. Cette thèse vise à utiliser la synergie des observations de télédétection multispectrales (données radar, optiques et thermiques) pour un suivi à haute résolution spatio-temporelle des besoins en eau des cultures. Dans ce contexte, différentes approches utilisant divers capteurs (Landsat-7/8, Sentinel-1 et MODIS) ont été developpées pour apporter une information sur l'humidité du sol (SM) et le stress hydrique des cultures à une échelle spatio-temporelle pertinente pour la gestion de l'irrigation. Ce travail va parfaitement dans le sens des objectifs du projet REC "Root zone soil moisture Estimates at the daily and agricultural parcel scales for Crop irrigation management and water use impact: a multi-sensor remote sensing approach" (http://rec.isardsat.com/) qui visent à estimer l'humidité du sol dans la zone racinaire (RZSM) afin d'optimiser la gestion de l'eau d'irrigation. Des approches innovantes et prometteuses sont mises en place pour estimer l'évapotranspiration (ET), RZSM, la température de surface du sol (LST) et le stress hydrique de la végétation à travers des indices de SM dérivés des observations multispectrales à haute résolution spatio-temporelle. Les méthodologies proposées reposent sur des méthodes basées sur l'imagerie, la modélisation du transfert radiatif et la modélisation du bilan hydrique et d'énergie et sont appliquées dans une région à climat semi-aride (centre du Maroc). Dans le cadre de ma thèse, trois axes ont été explorés. Dans le premier axe, un indice de RZSM dérivé de LST-Landsat est utilisé pour estimer l'ET sur des parcelles de blé et des sols nus. L'estimation par modélisation de ET a été explorée en utilisant l'équation de Penman-monteith modifiée obtenue en introduisant une relation empirique simple entre la résistance de surface (rc) et l'indice de RZSM. Ce dernier est estimé à partir de la température de surface (LST) dérivée de Landsat, combinée avec les températures extrêmes (en conditions humides et sèches) simulée par un modèle de bilan d'énergie de surface piloté par le forçage météorologique et la fraction de couverture végétale dérivée de Landsat. La méthode utilisée est calibrée et validée sur deux parcelles de blé situées dans la même zone près de Marrakech au Maroc. Dans l'axe suivant, une méthode permettant de récupérer la SM de la surface (0-5 cm) à une résolution spatiale et temporelle élevée est développée à partir d'une synergie entre données radar (Sentinel-1) et thermique (Landsat) et en utilisant un modèle de bilan d'énergie du sol. L'approche développée a été validée sur des parcelles agricoles en sol nu et elle donne une estimation précise de la SM avec une différence quadratique moyenne en comparant à la SM in situ, égale à 0,03 m3 m-3. Dans le dernier axe, une nouvelle méthode est développée pour désagréger la MODIS LST de 1 km à 100 m de résolution en intégrant le SM proche de la surface dérivée des données radar Sentinel-1 et l'indice de végétation optique dérivé des observations Landsat. Le nouvel algorithme, qui inclut la rétrodiffusion S-1 en tant qu'entrée dans la désagrégation, produit des résultats plus stables et robustes au cours de l'année sélectionnée. Dont, 3,35 °C était le RMSE le plus bas et 0,75 le coefficient de corrélation le plus élevé évalués en utilisant le nouvel algorithme.Optimizing water management in agriculture is essential over semi-arid areas in order to preserve water resources which are already low and erratic due to human actions and climate change. This thesis aims to use the synergy of multispectral remote sensing observations (radar, optical and thermal data) for high spatio-temporal resolution monitoring of crops water needs. In this context, different approaches using various sensors (Landsat-7/8, Sentinel-1 and MODIS) have been developed to provide information on the crop Soil Moisture (SM) and water stress at a spatio-temporal scale relevant to irrigation management. This work fits well the REC "Root zone soil moisture Estimates at the daily and agricultural parcel scales for Crop irrigation management and water use impact: a multi-sensor remote sensing approach" (http://rec.isardsat.com/) project objectives, which aim to estimate the Root Zone Soil Moisture (RZSM) for optimizing the management of irrigation water. Innovative and promising approaches are set up to estimate evapotranspiration (ET), RZSM, land surface temperature (LST) and vegetation water stress through SM indices derived from multispectral observations with high spatio-temporal resolution. The proposed methodologies rely on image-based methods, radiative transfer modelling and water and energy balance modelling and are applied in a semi-arid climate region (central Morocco). In the frame of my PhD thesis, three axes have been investigated. In the first axis, a Landsat LST-derived RZSM index is used to estimate the ET over wheat parcels and bare soil. The ET modelling estimation is explored using a modified Penman-Monteith equation obtained by introducing a simple empirical relationship between surface resistance (rc) and a RZSM index. The later is estimated from Landsat-derived land surface temperature (LST) combined with the LST endmembers (in wet and dry conditions) simulated by a surface energy balance model driven by meteorological forcing and Landsat-derived fractional vegetation cover. The investigated method is calibrated and validated over two wheat parcels located in the same area near Marrakech City in Morocco. In the next axis, a method to retrieve near surface (0-5 cm) SM at high spatial and temporal resolution is developed from a synergy between radar (Sentinel-1) and thermal (Landsat) data and by using a soil energy balance model. The developed approach is validated over bare soil agricultural fields and gives an accurate estimates of near surface SM with a root mean square difference compared to in situ SM equal to 0.03 m3 m-3. In the final axis a new method is developed to disaggregate the 1 km resolution MODIS LST at 100 m resolution by integrating the near surface SM derived from Sentinel-1 radar data and the optical-vegetation index derived from Landsat observations. The new algorithm including the S-1 backscatter as input to the disaggregation, produces more stable and robust results during the selected year. Where, 3.35 °C and 0.75 were the lowest RMSE and the highest correlation coefficient assessed using the new algorithm

A Class-Oriented Strategy for Features Extraction from Multidate ASTER Imagery

In this paper we propose a hybrid classification method, adopting the best features extraction strategy for each land cover class on multidate ASTER data. To enable an effective comparison among images, Multivariate Alteration Detection (MAD) transformation was applied in the pre-processing phase, because of its high level of automation and reliability in the enhancement of change information among different images. Consequently, different features identification procedures, both spectral and object-based, were implemented to overcome problems of misclassification among classes with similar spectral response. Lastly, a post-classification comparison was performed on multidate ASTER-derived land cover (LC) maps to evaluate the effects of change in the study area

Mineral identification using data-mining in hyperspectral infrared imagery

Les applications de l’imagerie infrarouge dans le domaine de la géologie sont principalement des applications hyperspectrales. Elles permettent entre autre l’identification minérale, la cartographie, ainsi que l’estimation de la portée. Le plus souvent, ces acquisitions sont réalisées in-situ soit à l’aide de capteurs aéroportés, soit à l’aide de dispositifs portatifs. La découverte de minéraux indicateurs a permis d’améliorer grandement l’exploration minérale. Ceci est en partie dû à l’utilisation d’instruments portatifs. Dans ce contexte le développement de systèmes automatisés permettrait d’augmenter à la fois la qualité de l’exploration et la précision de la détection des indicateurs. C’est dans ce cadre que s’inscrit le travail mené dans ce doctorat. Le sujet consistait en l’utilisation de méthodes d’apprentissage automatique appliquées à l’analyse (au traitement) d’images hyperspectrales prises dans les longueurs d’onde infrarouge. L’objectif recherché étant l’identification de grains minéraux de petites tailles utilisés comme indicateurs minéral -ogiques. Une application potentielle de cette recherche serait le développement d’un outil logiciel d’assistance pour l’analyse des échantillons lors de l’exploration minérale. Les expériences ont été menées en laboratoire dans la gamme relative à l’infrarouge thermique (Long Wave InfraRed, LWIR) de 7.7m à 11.8 m. Ces essais ont permis de proposer une méthode pour calculer l’annulation du continuum. La méthode utilisée lors de ces essais utilise la factorisation matricielle non négative (NMF). En utlisant une factorisation du premier ordre on peut déduire le rayonnement de pénétration, lequel peut ensuite être comparé et analysé par rapport à d’autres méthodes plus communes. L’analyse des résultats spectraux en comparaison avec plusieurs bibliothèques existantes de données a permis de mettre en évidence la suppression du continuum. Les expérience ayant menés à ce résultat ont été conduites en utilisant une plaque Infragold ainsi qu’un objectif macro LWIR. L’identification automatique de grains de différents matériaux tels que la pyrope, l’olivine et le quartz a commencé. Lors d’une phase de comparaison entre des approches supervisées et non supervisées, cette dernière s’est montrée plus approprié en raison du comportement indépendant par rapport à l’étape d’entraînement. Afin de confirmer la qualité de ces résultats quatre expériences ont été menées. Lors d’une première expérience deux algorithmes ont été évalués pour application de regroupements en utilisant l’approche FCC (False Colour Composite). Cet essai a permis d’observer une vitesse de convergence, jusqu’a vingt fois plus rapide, ainsi qu’une efficacité significativement accrue concernant l’identification en comparaison des résultats de la littérature. Cependant des essais effectués sur des données LWIR ont montré un manque de prédiction de la surface du grain lorsque les grains étaient irréguliers avec présence d’agrégats minéraux. La seconde expérience a consisté, en une analyse quantitaive comparative entre deux bases de données de Ground Truth (GT), nommée rigid-GT et observed-GT (rigide-GT: étiquet manuel de la région, observée-GT:étiquetage manuel les pixels). La précision des résultats était 1.5 fois meilleur lorsque l’on a utlisé la base de données observed-GT que rigid-GT. Pour les deux dernières epxérience, des données venant d’un MEB (Microscope Électronique à Balayage) ainsi que d’un microscopie à fluorescence (XRF) ont été ajoutées. Ces données ont permis d’introduire des informations relatives tant aux agrégats minéraux qu’à la surface des grains. Les résultats ont été comparés par des techniques d’identification automatique des minéraux, utilisant ArcGIS. Cette dernière a montré une performance prometteuse quand à l’identification automatique et à aussi été utilisée pour la GT de validation. Dans l’ensemble, les quatre méthodes de cette thèse représentent des méthodologies bénéfiques pour l’identification des minéraux. Ces méthodes présentent l’avantage d’être non-destructives, relativement précises et d’avoir un faible coût en temps calcul ce qui pourrait les qualifier pour être utilisée dans des conditions de laboratoire ou sur le terrain.The geological applications of hyperspectral infrared imagery mainly consist in mineral identification, mapping, airborne or portable instruments, and core logging. Finding the mineral indicators offer considerable benefits in terms of mineralogy and mineral exploration which usually involves application of portable instrument and core logging. Moreover, faster and more mechanized systems development increases the precision of identifying mineral indicators and avoid any possible mis-classification. Therefore, the objective of this thesis was to create a tool to using hyperspectral infrared imagery and process the data through image analysis and machine learning methods to identify small size mineral grains used as mineral indicators. This system would be applied for different circumstances to provide an assistant for geological analysis and mineralogy exploration. The experiments were conducted in laboratory conditions in the long-wave infrared (7.7μm to 11.8μm - LWIR), with a LWIR-macro lens (to improve spatial resolution), an Infragold plate, and a heating source. The process began with a method to calculate the continuum removal. The approach is the application of Non-negative Matrix Factorization (NMF) to extract Rank-1 NMF and estimate the down-welling radiance and then compare it with other conventional methods. The results indicate successful suppression of the continuum from the spectra and enable the spectra to be compared with spectral libraries. Afterwards, to have an automated system, supervised and unsupervised approaches have been tested for identification of pyrope, olivine and quartz grains. The results indicated that the unsupervised approach was more suitable due to independent behavior against training stage. Once these results obtained, two algorithms were tested to create False Color Composites (FCC) applying a clustering approach. The results of this comparison indicate significant computational efficiency (more than 20 times faster) and promising performance for mineral identification. Finally, the reliability of the automated LWIR hyperspectral infrared mineral identification has been tested and the difficulty for identification of the irregular grain’s surface along with the mineral aggregates has been verified. The results were compared to two different Ground Truth(GT) (i.e. rigid-GT and observed-GT) for quantitative calculation. Observed-GT increased the accuracy up to 1.5 times than rigid-GT. The samples were also examined by Micro X-ray Fluorescence (XRF) and Scanning Electron Microscope (SEM) in order to retrieve information for the mineral aggregates and the grain’s surface (biotite, epidote, goethite, diopside, smithsonite, tourmaline, kyanite, scheelite, pyrope, olivine, and quartz). The results of XRF imagery compared with automatic mineral identification techniques, using ArcGIS, and represented a promising performance for automatic identification and have been used for GT validation. In overall, the four methods (i.e. 1.Continuum removal methods; 2. Classification or clustering methods for mineral identification; 3. Two algorithms for clustering of mineral spectra; 4. Reliability verification) in this thesis represent beneficial methodologies to identify minerals. These methods have the advantages to be a non-destructive, relatively accurate and have low computational complexity that might be used to identify and assess mineral grains in the laboratory conditions or in the field

Utility of thermal sharpening over Texas high plains irrigated agricultural fields

Irrigated crop production in the Texas high plains (THP) is dependent on water extracted from the Ogallala Aquifer, an area suffering from sever water shortage. Water management in this area is therefore highly important. Thermal satellite imagery at high temporal (~daily) and high spatial (~100 m) resolutions could provide important surface boundary conditions for vegetation stress and water use monitoring, mainly through energy balance models such as DisALEXI. At present, however, no satellite platform collects such high spatiotemporal resolution data. The objective of this study is to examine the utility of an image sharpening technique (TsHARP) for retrieving land surface temperature at high spatial resolution (down to 60 m) from moderate spatial resolution (1 km) imagery, which is typically available at higher (~daily) temporal frequency. A simulated sharpening experiment was applied to Landsat 7 imagery collected over the THP in September 2002 to examine its utility over both agricultural and natural vegetation cover. The Landsat thermal image was aggregated to 960 m resolution and then sharpened to its native resolution of 60 m and to various intermediate resolutions. The algorithm did not provide any measurable improvement in estimating high-resolution temperature distributions over natural land cover. In contrast, TsHARP was shown to retrieve high-resolution temperature information with good accuracy over much of the agricultural area within the scene. However, in recently irrigated fields, TsHARP could not reproduce the temperature patterns. Therefore we conclude that TsHARP is not an adequate substitute for 100-m-scale observations afforded by the current Landsat platforms. Should the thermal imager be removed from follow-on Landsat platforms, we will lose valuable capacity to monitor water use at the field scale, particularly in many agricultural regions where the typical field size is ~100 X 100 m. In this scenario, sharpened thermal imagery from instruments like MODIS or VIIRS would be the suboptimal alternative