Keyword based profile creation using latent dirichlet allocation, domain dictionary and domain ontology / Nor Adzlan Jamaludin

Expert Finding is a field in information retrieval that focuses on finding an expert based on several criteria. Some of the methods that have been applied for expert finding include statistical, machine learning and ontology-based methods. Profile creation is one of the steps or tasks that are required in expert finding, which is the process of capturing and representing the details of experts and users which later can be used for retrieval. An issue that is faced for profile creation in expert finding is that the profiles being created are focused on the details of the experts but not on the users who are searching for these experts. This research explores a profile creation model that creates domain specific keyword-based profiles of users using Latent Dirichlet Allocation, domain dictionary and domain ontology from bookmarks. The domain of agriculture is selected as the case study for this research. The model is implemented in a form of a prototype and is evaluated by comparing how similar the prototype created profiles with manually built ones. From the results and analysis of the research, it is concluded that the method can successfully create domain specific profiles. The significances and contributions of the research include the application of LDA in user profiling, the proposed model, model prototype and the results and findings of the experiments conducted throughout the research

The Computer Science Ontology: A Large-Scale Taxonomy of Research Areas

Ontologies of research areas are important tools for characterising, exploring, and analysing the research landscape. Some fields of research are comprehensively described by large-scale taxonomies, e.g., MeSH in Biology and PhySH in Physics. Conversely, current Computer Science taxonomies are coarse-grained and tend to evolve slowly. For instance, the ACM classification scheme contains only about 2K research topics and the last version dates back to 2012. In this paper, we introduce the Computer Science Ontology (CSO), a large-scale, automatically generated ontology of research areas, which includes about 26K topics and 226K semantic relationships. It was created by applying the Klink-2 algorithm on a very large dataset of 16M scientific articles. CSO presents two main advantages over the alternatives: i) it includes a very large number of topics that do not appear in other classifications, and ii) it can be updated automatically by running Klink-2 on recent corpora of publications. CSO powers several tools adopted by the editorial team at Springer Nature and has been used to enable a variety of solutions, such as classifying research publications, detecting research communities, and predicting research trends. To facilitate the uptake of CSO we have developed the CSO Portal, a web application that enables users to download, explore, and provide granular feedback on CSO at different levels. Users can use the portal to rate topics and relationships, suggest missing relationships, and visualise sections of the ontology. The portal will support the publication of and access to regular new releases of CSO, with the aim of providing a comprehensive resource to the various communities engaged with scholarly data

The devices, experimental scaffolds, and biomaterials ontology (DEB): a tool for mapping, annotation, and analysis of biomaterials' data

The size and complexity of the biomaterials literature makes systematic data analysis an excruciating manual task. A practical solution is creating databases and information resources. Implant design and biomaterials research can greatly benefit from an open database for systematic data retrieval. Ontologies are pivotal to knowledge base creation, serving to represent and organize domain knowledge. To name but two examples, GO, the gene ontology, and CheBI, Chemical Entities of Biological Interest ontology and their associated databases are central resources to their respective research communities. The creation of the devices, experimental scaffolds, and biomaterials ontology (DEB), an open resource for organizing information about biomaterials, their design, manufacture, and biological testing, is described. It is developed using text analysis for identifying ontology terms from a biomaterials gold standard corpus, systematically curated to represent the domain's lexicon. Topics covered are validated by members of the biomaterials research community. The ontology may be used for searching terms, performing annotations for machine learning applications, standardized meta-data indexing, and other cross-disciplinary data exploitation. The input of the biomaterials community to this effort to create data-driven open-access research tools is encouraged and welcomed.Preprin

Contextualizing Citations for Scientific Summarization using Word Embeddings and Domain Knowledge

Citation texts are sometimes not very informative or in some cases inaccurate by themselves; they need the appropriate context from the referenced paper to reflect its exact contributions. To address this problem, we propose an unsupervised model that uses distributed representation of words as well as domain knowledge to extract the appropriate context from the reference paper. Evaluation results show the effectiveness of our model by significantly outperforming the state-of-the-art. We furthermore demonstrate how an effective contextualization method results in improving citation-based summarization of the scientific articles.Comment: SIGIR 201