13,527 research outputs found

    Naming of standards of physical composition of BioBrick parts

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    This BioBricks Foundation Request for Comments (BBF RFC) proposes a naming convention for standards of physical composition of BioBrick parts in which assembly standards are named according to the BBF RFC that specifies the standard

    "BioSandwich", a homology-based assembly method using a library of standard parts

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    This Request for Comments (RFC) describes a strategy for using homology-based assembly methods to assemble parts from a library in any order

    The USER cloning standard

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    This BioBricks Foundation Request for Comments (BBF RFC) provides information about the design of uracil-containing primers used for USER cloning and USER fusion

    BBF RFC 105: The Intein standard - a universal way to modify proteins after translation

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    This Request for Comments (RFC) proposes a new standard that allows for easy and flexible cloning of intein constructs and thus makes this technology accessible to the synthetic biology community

    MUSIC - Multisimulation Coordinator: Request For Comments

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    MUSIC is an API allowing large scale neuron simulators using MPI internally to exchange data during runtime. MUSIC provides mechanisms to transfer massive amounts of event information and continuous values from one parallel application to another. Special care has been taken to ensure that existing simulators can be adapted to MUSIC. In particular, MUSIC handles data transfer between applications that use different time steps and different data allocation strategies. This RFC - Request For Comments - document invites comments on the proposed design and prototype specifications. 
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    Provisional BioBrick Language (PoBoL)

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    This BioBricks Foundation Request for Comments (BBF RFC) describes a semantic markup language for publishing and sharing information about BioBricks on the World Wide Web. This BBF RFC includes the recommendation for the minimal information expected when creating a Provisional BioBrick Language (PoBoL) description of BioBricks and for the implementation of the language using Web Ontology Language (OWL)

    GenBrick – A Rapid Multi-Part Assembly Method for BioBricks

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    This BioBricks Foundation Request for Comments (BBF RFC) describes a novel approach, GenBrick, for the rapid assembly of multiple BioBrick RFC10-compatible parts in a single reaction, with completely flexible part order, without recloning or reamplification

    BBF RFC 107: Copyright and Licensing of BBF RFCs

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    In this BioBricks Foundation Request for Comments (BBF RFC), we update and clarify the copyright and licensing notice of BBF RFC documents

    How to Build Kinetic Models of BioBricks

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    This BioBricks Foundation Request for Comments (BBF RFC) provides instructions on how to automatically generate a model of any BioBrick sequence. These models can be used in computer simulations of the dynamic behavior of all molecular components of the BioBrick
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