Energy-Water Balance and Ecosystem Response to Climate Change in Southwest China

It is important to highlight energy-water balance and ecosystem response to climate changes. The change of water-energy balance and ecosystem due to climate change will affect the regional ecological and human living significantly, especially in Southwest China which is an ecologically fragile area. This chapter presents the retrieval methodology of parameters (reconstruction of vegetation index, land cover semi-automatic classification, a time series reconstruction of land surface temperature based on Kalman filter and precipitation interpolation based on thin plate smoothing splines), time-series analysis methodology (land cover change, vegetation succession and drought index) and correlate analysis methodology (correlation coefficient and principal component analysis). Then, based on the above method, remote sensing data were integrated, a time series analysis on a 30-year data was used to illustrate the water-energy balance and ecosystem variability in Southwest China. The result showed that energy-water balance and ecosystem (ecosystem structures, vegetation and droughts) have severe response to climate change

Mapping crop phenology using NDVI time-series derived from HJ-1 A/B data

With the availability of high frequent satellite data, crop phenology could be accurately mapped using time-series remote sensing data. Vegetation index time-series data derived from AVHRR, MODIS, and SPOT-VEGETATION images usually have coarse spatial resolution. Mapping crop phenology parameters using higher spatial resolution images (e.g., Landsat TM-like) is unprecedented. Recently launched HJ-1 A/B CCD sensors boarded on China Environment Satellite provided a feasible and ideal data source for the construction of high spatio-temporal resolution vegetation index time-series. This paper presented a comprehensive method to construct NDVI time-series dataset derived from HJ-1 A/B CCD and demonstrated its application in cropland areas. The procedures of time-series data construction included image preprocessing, signal filtering, and interpolation for daily NDVI images then the NDVI time-series could present a smooth and complete phenological cycle. To demonstrate its application, TIMESAT program was employed to extract phenology parameters of crop lands located in Guanzhong Plain, China. The small-scale test showed that the crop season start/end derived from HJ-1 A/B NDVI time-series was comparable with local agro-metrological observation. The methodology for reconstructing time-series remote sensing data had been proved feasible, though forgoing researches will improve this a lot in mapping crop phenology. Last but not least, further studies should be focused on field-data collection, smoothing method and phenology definitions using time-series remote sensing data

A Review of Vegetation Phenological Metrics Extraction Using Time-Series, Multispectral Satellite Data

Vegetation dynamics and phenology play an important role in inter-annual vegetation changes in terrestrial ecosystems and are key indicators of climate-vegetation interactions, land use/land cover changes, and variation in year-to-year vegetation productivity. Satellite remote sensing data have been widely used for vegetation phenology monitoring over large geographic domains using various types of observations and methods over the past several decades. The goal of this paper is to present a detailed review of existing methods for phenology detection and emerging new techniques based on the analysis of time-series, multispectral remote sensing imagery. This paper summarizes the objective and applications of detecting general vegetation phenology stages (e.g., green onset, time or peak greenness, and growing season length) often termed “land surface phenology,” as well as more advanced methods that estimate species-specific phenological stages (e.g., silking stage of maize). Common data-processing methods, such as data smoothing, applied to prepare the time-series remote sensing observations to be applied to phenological detection methods are presented. Specific land surface phenology detection methods as well as species-specific phenology detection methods based on multispectral satellite data are then discussed. The impact of different error sources in the data on remote-sensing based phenology detection are also discussed in detail, as well as ways to reduce these uncertainties and errors. Joint analysis of multiscale observations ranging from satellite to more recent ground-based sensors is helpful for us to understand satellite-based phenology detection mechanism and extent phenology detection to regional scale in the future. Finally, emerging opportunities to further advance remote sensing of phenology is presented that includes observations from Cubesats, near-surface observations such as PhenoCams, and image data fusion techniques to improve the spatial resolution of time-series image data sets needed for phenological characterization

Multi-Season Phenology Mapping of Nile Delta Croplands Using Time Series of Sentinel-2 and Landsat 8 Green LAI

Space-based cropland phenology monitoring substantially assists agricultural managing practices and plays an important role in crop yield predictions. Multitemporal satellite observations allow analyzing vegetation seasonal dynamics over large areas by using vegetation indices or by deriving biophysical variables. The Nile Delta represents about half of all agricultural lands of Egypt. In this region, intensifying farming systems are predominant and multi-cropping rotations schemes are increasing, requiring a high temporal and spatial resolution monitoring for capturing successive crop growth cycles. This study presents a workflow for cropland phenology characterization and mapping based on time series of green Leaf Area Index (LAI) generated from NASA’s Harmonized Landsat 8 (L8) and Sentinel-2 (S2) surface reflectance dataset from 2016 to 2019. LAI time series were processed for each satellite dataset, which were used separately and combined to identify seasonal dynamics for a selection of crop types (wheat, clover, maize and rice). For the combination of L8 with S2 LAI products, we proposed two time series smoothing and fitting methods: (1) the Savitzky–Golay (SG) filter and (2) the Gaussian Processes Regression (GPR) fitting function. Single-sensor and L8-S2 combined LAI time series were used for the calculation of key crop Land Surface Phenology (LSP) metrics (start of season, end of season, length of season), whereby the detection of cropland growing seasons was based on two established threshold methods, i.e., a seasonal or a relative amplitude value. Overall, the developed phenology extraction scheme enabled identifying up to two successive crop cycles within a year, with a superior performance observed for the seasonal than for the relative threshold method, in terms of consistency and cropland season detection capability. Differences between the time series collections were analyzed by comparing the phenology metrics per crop type and year. Results suggest that L8-S2 combined LAI data streams with GPR led to a more precise detection of the start and end of growing seasons for most crop types, reaching an overall detection of 74% over the total planted crops versus 69% with S2 and 63% with L8 alone. Finally, the phenology mapping allowed us to evaluate the spatial and temporal evolution of the croplands over the agroecosystem in the Nile Delta.E.A. was supported by the predoctoral scholarship, grant number ACIF/2019/187, funded by the Generalitat Valenciana and co-funded by the European Social Fund. J.V. and S.B. were supported by the European Research Council (ERC) under the ERC-2017-STG SENTIFLEX project, grant number 755617. J.V. was additionally supported by a Ramón y Cajal Contract (Spanish Ministry of Science, Innovation and Universities). S.B. was additionally supported by the Generalitat Valenciana SEJIGENT program (SEJIGENT/2021/001) and European Union—NextGenerationEU (ZAMBRANO 21-04)

Phenological response of vegetation to upstream river flow in the Heihe Rive basin by time series analysis of MODIS data

Liquid and solid precipitation is abundant in the high elevation, upper reach of the Heihe River basin in northwestern China. The development of modern irrigation schemes in the middle reach of the basin is taking up an increasing share of fresh water resources, endangering the oasis and traditional irrigation systems in the lower reach. In this study, the response of vegetation in the Ejina Oasis in the lower reach of the Heihe River to the water yield of the upper catchment was analyzed by time series analysis of monthly observations of precipitation in the upper and lower catchment, river streamflow downstream of the modern irrigation schemes and satellite observations of vegetation index. Firstly, remotely sensed NDVI data acquired by Terra-MODIS are used to monitor the vegetation dynamic for a seven years period between 2000 and 2006. Due to cloud-contamination, atmospheric influence and different solar and viewing angles, however, the quality and consistence of time series of remotely sensed NDVI data are degraded. A Fourier Transform method – the Harmonic Analysis of Time Series (HANTS) algorithm – is used to reconstruct cloud- and noise-free NDVI time series data from the Terra-MODIS NDVI dataset. Modification is made on HANTS by adding additional parameters to deal with large data gaps in yearly time series in combination with a Temporal-Similarity-Statistics (TSS) method developed in this study to seek for initial values for the large gap periods. Secondly, the same Fourier Transform method is used to model time series of the vegetation phenology. The reconstructed cloud-free NDVI time series data are used to study the relationship between the water availability (i.e. the local precipitation and upstream water yield) and the evolution of vegetation conditions in Ejina Oasis from 2000 to 2006. Anomalies in precipitation, streamflow, and vegetation index are detected by comparing each year with the average year. The results showed that: the previous year total runoff had a significant relationship with the vegetation growth in Ejina Oasis and that anomalies in the spring monthly runoff of the Heihe River influenced the phenology of vegetation in the entire oasis. Warmer climate expressed by the degree-days showed positive influence on the vegetation phenology in particular during drier years. The time of maximum green-up is uniform throughout the oasis during wetter years, but showed a clear S-N gradient (downstream) during drier years

Remote Sensing of Coastal Wetlands: Long term vegetation stress assessment and data enhancement technique

Apalachicola Bay in the Florida panhandle is home to a rich variety of salt water and freshwater wetlands but unfortunately is also subject to a wide range of hydrologic extreme events. Extreme hydrologic events such as hurricanes and droughts continuously threaten the area. The impact of hurricane and drought on both fresh and salt water wetlands was investigated over the time period from 2000 to 2015 in Apalachicola Bay using spatio-temporal changes in the Landsat based NDVI. Results indicate that salt water wetlands were more resilient than fresh water wetlands. Results also suggest that in response to hurricanes, the coastal wetlands took almost a year to recover while recovery following a drought period was observed after only a month. This analysis was successful and provided excellent insights into coastal wetland health. Such long term study is heavily dependent on optical sensor that is subject to data loss due to cloud coverage. Therefore, a novel method is proposed and demonstrated to recover the information contaminated by cloud. Cloud contamination is a hindrance to long-term environmental assessment using information derived from satellite imagery that retrieve data from visible and infrared spectral ranges. Normalized Difference Vegetation Index (NDVI) is a widely used index to monitor vegetation and land use change. NDVI can be retrieved from publicly available data repositories of optical sensors such as Landsat, Moderate Resolution Imaging Spectro-radiometer (MODIS) and several commercial satellites. Landsat has an ongoing high resolution NDVI record starting from 1984. Unfortunately, the time series NDVI data suffers from the cloud contamination issue. Though simple to complex computational methods for data interpolation have been applied to recover cloudy data, all the techniques are subject to many limitations. In this paper, a novel Optical Cloud Pixel Recovery (OCPR) method is proposed to repair cloudy pixels from the time-space-spectrum continuum with the aid of a machine learning tool, namely random forest (RF) trained and tested utilizing multi-parameter hydrologic data. The RF based OCPR model was compared with a simple linear regression (LR) based OCPR model to understand the potential of the model. A case study in Apalachicola Bay is presented to evaluate the performance of OCPR to repair cloudy NDVI reflectance for two specific dates. The RF based OCPR method achieves a root mean squared error of 0.0475 sr?1 between predicted and observed NDVI reflectance values. The LR based OCPR method achieves a root mean squared error of 0.1257 sr?1. Findings suggested that the RF based OCPR method is effective to repair cloudy values and provide continuous and quantitatively reliable imagery for further analysis in environmental applications

Assessment of spatio-temporal vegetation dynamics in tropical arid ecosystem of India using MODIS time-series vegetation indices

In the present study, we analyzed spatio-temporal vegetation dynamics to identify and delineate the vegetation stress zones in tropical arid ecosystem of Anantapuramu district, Andhra Pradesh, India, using Normalized Difference Vegetation Index (NDVI), Vegetation Condition Index (VCI), and Vegetation Anomaly Index (VAI) derived from time-series Moderate Resolution Imaging Spectroradiometer (MODIS) 16-day products (MOD13Q1) at 250 m spatial resolution for the growing season (June to September) of 19 years during 2000 to 2018. The 1-month Standardized Precipitation Index (SPI) was computed for 30 years (1989 to 2018) to quantify the precipitation deficit/surplus regions and assess its influence on vegetation dynamics. The growing season mean NDVI and VCI were correlated with growing season mean 1-month SPI of dry (2003) and wet (2007) years to analyze the spatio-temporal vegetation dynamics. The correlation analysis between SPI and NDVI for dry year (2003) showed strong positive correlation (r = 0.89). Analysis of VAI for dry year (2003) indicates that the central, western, and southwestern parts of the district reported high vegetation stress with VAI of less than − 2.0. This might be due to the fact that central and south-western parts of the district are more prone to droughts than the other parts of the district. The correlation analysis of SPI, NDVI, and VCI distinctly shows the impact of rainfall on vegetation dynamics. The study clearly demonstrates the robustness of NDVI, VCI, and VAI derived from time-series MODIS data in monitoring the spatio-temporal vegetation dynamics and delineate vegetation stress zones in tropical arid ecosystem of India

Determination of crop coefficient (kc) based on machine learning NDVI time series models

This dissertation aims to meet the required challenge of providing reflectance-based crop coefficient models to reduce water consumption in agriculture irrigation. In this work, 6 different models were created for each crop by using normalized difference vegetation index (NDVI) to estimate crop coefficients (Kc) for maize, tomato, potato and sunflower for Lezíria do Tejo region combining different pre-selection methods of time series and mean and k-means to create new time series and use linear and polynomial regression to fit the new generate time series with theoretical Kc curves to use these models to determine Kc in this region. These models’ performance was assessed using the coefficient of determination (R2), root mean square error (RMSE) and a visual inspection of test set predictions. The results show that the Kc-NDVI models created were able to capture the theoretical curves of Kc well, and the use of a pre-selection of time series, mean and k-means for these crops is useful to capture the curves of the crop coefficients since some of the best results obtained were when they were used. The best methodologies depend on each crop; no one is globally better than the others. The results shown are promising and can be seen as potential methods to better determine crop coefficients and the models are suitable for their use at least in the region of this study.O objetivo da dissertação é enfrentar o desafio necessário de fornecer modelos de coeficiente de cultura (Kc) baseados em refletância para reduzir o consumo de água na irrigação agrícola. Neste trabalho, foram criados 6 modelos diferentes para cada uma das culturas usando o índice de vegetação por diferença normalizada (NDVI) para estimar os coeficientes de cultura para milho, tomate, batata e girassol na região da Lezíria do Tejo combinando diferentes métodos de pré-seleção de séries temporais e usando a média e k-means para criar novas séries temporais, bem como usar regressão linear e polinomial para ajustar as novas séries temporais geradas com curvas Kc teóricas com o objetivo de usar esses modelos para determinar Kc nesta região. O desempenho desses modelos foi avaliado usando o coeficiente de determinação (R2), a raiz quadrada do erro quadrático médio (RMSE) e uma inspeção visual das previsões no conjunto de teste. Os resultados mostram que os modelos Kc-NDVI criados conseguiram capturar bem as curvas teóricas de Kc, bem como o uso de uma pré-seleção das séries temporais, média e k-means para estas culturas são úteis para capturar as curvas dos coeficientes de cultura, uma vez que alguns dos melhores resultados obtidos foram quando estas foram utilizadas. As melhores metodologias dependem de cada cultura e não existe uma que seja globalmente melhor. Estes resultados obtidos são promissores e podem ser vistos como métodos potenciais para melhor determinar os coeficientes de cultura e os modelos são adequados para seu uso pelo menos na região estudada

A Comparative Study of Satellite and Ground-Based Vineyard Phenology

Grapevine phenology observations are essential for ecological adaptability of grape varieties, crop management and crop modelling. Phenological events have traditionally been ground based, with observations mainly providing information concerning grape varieties over a limited spatial area and few in-season observations. Time-series of satellite imagery can rapidly provide a synoptic and objective view of grape vegetation dynamics that may be used for vineyard management. Ten-day VEGETATION image composites from 1999 to 2007 were used to examine temporal profile in the Normalized Difference Vegetation Index (NDVI) and their relationship with ground based observation of grapevine phenology. In Portugal is Douro wine region, 2 suitable tests sites with over 70% or more of their area occupied by grapevines were selected. A number of NDVI metrics were obtained for each year through logistic model adjusted to NDVI time series after noise reduction using a Savitzky-Golay filter. The comparison of ground-based vineyard phenology and satellite-derived flowering, show an average spread deviation of 3 days. The satellite derived full canopy date was significantly correlated to the veraison date (r=0.87; n=7; p<0.02). The data set provided by the VEGETATION sensor proved to be a valuable tool for vineyard monitoring, mainly for inter-annual comparisons on regional scale