A Comprehensive Survey of Deep Learning in Remote Sensing: Theories, Tools and Challenges for the Community

In recent years, deep learning (DL), a re-branding of neural networks (NNs), has risen to the top in numerous areas, namely computer vision (CV), speech recognition, natural language processing, etc. Whereas remote sensing (RS) possesses a number of unique challenges, primarily related to sensors and applications, inevitably RS draws from many of the same theories as CV; e.g., statistics, fusion, and machine learning, to name a few. This means that the RS community should be aware of, if not at the leading edge of, of advancements like DL. Herein, we provide the most comprehensive survey of state-of-the-art RS DL research. We also review recent new developments in the DL field that can be used in DL for RS. Namely, we focus on theories, tools and challenges for the RS community. Specifically, we focus on unsolved challenges and opportunities as it relates to (i) inadequate data sets, (ii) human-understandable solutions for modelling physical phenomena, (iii) Big Data, (iv) non-traditional heterogeneous data sources, (v) DL architectures and learning algorithms for spectral, spatial and temporal data, (vi) transfer learning, (vii) an improved theoretical understanding of DL systems, (viii) high barriers to entry, and (ix) training and optimizing the DL.Comment: 64 pages, 411 references. To appear in Journal of Applied Remote Sensin

Deep learning in computational microscopy

We propose to use deep convolutional neural networks (DCNNs) to perform 2D and 3D computational imaging. Specifically, we investigate three different applications. We first try to solve the 3D inverse scattering problem based on learning a huge number of training target and speckle pairs. We also demonstrate a new DCNN architecture to perform Fourier ptychographic Microscopy (FPM) reconstruction, which achieves high-resolution phase recovery with considerably less data than standard FPM. Finally, we employ DCNN models that can predict focused 2D fluorescent microscopic images from blurred images captured at overfocused or underfocused planes.Published versio

Robust Minutiae Extractor: Integrating Deep Networks and Fingerprint Domain Knowledge

We propose a fully automatic minutiae extractor, called MinutiaeNet, based on deep neural networks with compact feature representation for fast comparison of minutiae sets. Specifically, first a network, called CoarseNet, estimates the minutiae score map and minutiae orientation based on convolutional neural network and fingerprint domain knowledge (enhanced image, orientation field, and segmentation map). Subsequently, another network, called FineNet, refines the candidate minutiae locations based on score map. We demonstrate the effectiveness of using the fingerprint domain knowledge together with the deep networks. Experimental results on both latent (NIST SD27) and plain (FVC 2004) public domain fingerprint datasets provide comprehensive empirical support for the merits of our method. Further, our method finds minutiae sets that are better in terms of precision and recall in comparison with state-of-the-art on these two datasets. Given the lack of annotated fingerprint datasets with minutiae ground truth, the proposed approach to robust minutiae detection will be useful to train network-based fingerprint matching algorithms as well as for evaluating fingerprint individuality at scale. MinutiaeNet is implemented in Tensorflow: https://github.com/luannd/MinutiaeNetComment: Accepted to International Conference on Biometrics (ICB 2018