2,257 research outputs found
GPU-based Real-Time Soft Tissue Deformation with Cutting and Haptic Feedback
Special Issue on Biomechanical Modelling of Soft Tissue MotionInternational audienceThis article describes a series of contributions in the field of real-time simulation of soft tissue biomechanics. These contributions address various requirements for interactive simulation of complex surgical procedures. In particular, this article presents results in the areas of soft tissue deformation, contact modelling, simulation of cutting, and haptic rendering, which are all relevant to a variety of medical interventions. The contributions described in this article share a common underlying model of deformation and rely on GPU implementations to significantly improve computation times. This consistency in the modelling technique and computational approach ensures coherent results as well as efficient, robust and flexible solutions
Modelling Rod-like Flexible Biological Tissues for Medical Training
This paper outlines a framework for the modelling of slender rod-like biological tissue structures in both global and local scales. Volumetric discretization of a rod-like structure is expensive in computation and therefore
is not ideal for applications where real-time performance is essential. In our approach, the Cosserat rod model is introduced to capture the global shape changes, which models the structure as a one-dimensional entity, while the
local deformation is handled separately. In this way a good balance in accuracy and efficiency is achieved. These advantages make our method appropriate for
the modelling of soft tissues for medical training applications
Simulation of hyperelastic materials in real-time using Deep Learning
The finite element method (FEM) is among the most commonly used numerical
methods for solving engineering problems. Due to its computational cost,
various ideas have been introduced to reduce computation times, such as domain
decomposition, parallel computing, adaptive meshing, and model order reduction.
In this paper we present U-Mesh: a data-driven method based on a U-Net
architecture that approximates the non-linear relation between a contact force
and the displacement field computed by a FEM algorithm. We show that deep
learning, one of the latest machine learning methods based on artificial neural
networks, can enhance computational mechanics through its ability to encode
highly non-linear models in a compact form. Our method is applied to two
benchmark examples: a cantilever beam and an L-shape subject to moving punctual
loads. A comparison between our method and proper orthogonal decomposition
(POD) is done through the paper. The results show that U-Mesh can perform very
fast simulations on various geometries, mesh resolutions and number of input
forces with very small errors
A Study of Speed of the Boundary Element Method as applied to the Realtime Computational Simulation of Biological Organs
In this work, possibility of simulating biological organs in realtime using
the Boundary Element Method (BEM) is investigated. Biological organs are
assumed to follow linear elastostatic material behavior, and constant boundary
element is the element type used. First, a Graphics Processing Unit (GPU) is
used to speed up the BEM computations to achieve the realtime performance.
Next, instead of the GPU, a computer cluster is used. Results indicate that BEM
is fast enough to provide for realtime graphics if biological organs are
assumed to follow linear elastostatic material behavior. Although the present
work does not conduct any simulation using nonlinear material models, results
from using the linear elastostatic material model imply that it would be
difficult to obtain realtime performance if highly nonlinear material models
that properly characterize biological organs are used. Although the use of BEM
for the simulation of biological organs is not new, the results presented in
the present study are not found elsewhere in the literature.Comment: preprint, draft, 2 tables, 47 references, 7 files, Codes that can
solve three dimensional linear elastostatic problems using constant boundary
elements (of triangular shape) while ignoring body forces are provided as
supplementary files; codes are distributed under the MIT License in three
versions: i) MATLAB version ii) Fortran 90 version (sequential code) iii)
Fortran 90 version (parallel code
Real-time Knowledge-based Fuzzy Logic Model for Soft Tissue Deformation
In this research, the improved mass spring model is presented to simulate the human liver deformation. The underlying MSM is redesigned where fuzzy knowledge-based approaches are implemented to determine the stiffness values. Results show that fuzzy approaches are in very good agreement to the benchmark model. The novelty of this research is that for liver deformation in particular, no specific contributions in the literature exist reporting on real-time knowledge-based fuzzy MSM for liver deformation
Physically-based forehead animation including wrinkles
Physically-based animation techniques enable more realistic and accurate animation to be created. We present a fully physically-based approach for efficiently producing realistic-looking animations of facial movement, including animation of expressive wrinkles. This involves simulation of detailed voxel-based models using a graphics processing unit-based total Lagrangian explicit dynamic finite element solver with an anatomical muscle contraction model, and advanced boundary conditions that can model the sliding of soft tissue over the skull. The flexibility of our approach enables detailed animations of gross and fine-scale soft-tissue movement to be easily produced with different muscle structures and material parameters, for example, to animate different aged skins. Although we focus on the forehead, our approach can be used to animate any multi-layered soft body
NOViSE: a virtual natural orifice transluminal endoscopic surgery simulator
Purpose: Natural Orifice Transluminal Endoscopic Surgery (NOTES) is a novel technique in minimally invasive surgery whereby a flexible endoscope is inserted via a natural orifice to gain access to the abdominal cavity, leaving no external scars. This innovative use of flexible endoscopy creates many new challenges and is associated with a steep learning curve for clinicians. Methods: We developed NOViSE - the first force-feedback enabled virtual reality simulator for NOTES training supporting a flexible endoscope. The haptic device is custom built and the behaviour of the virtual flexible endoscope is based on an established theoretical framework – the Cosserat Theory of Elastic Rods. Results: We present the application of NOViSE to the simulation of a hybrid trans-gastric cholecystectomy procedure. Preliminary results of face, content and construct validation have previously shown that NOViSE delivers the required level of realism for training of endoscopic manipulation skills specific to NOTES Conclusions: VR simulation of NOTES procedures can contribute to surgical training and improve the educational experience without putting patients at risk, raising ethical issues or requiring expensive animal or cadaver facilities. In the context of an experimental technique, NOViSE could potentially facilitate NOTES development and contribute to its wider use by keeping practitioners up to date with this novel surgical technique. NOViSE is a first prototype and the initial results indicate that it provides promising foundations for further development
- …