Virtualisation of FPGA-Resources for Concurrent User Designs Employing Partial Dynamic Reconfiguration

Reconfigurable hardware in a cloud environment is a power efficient way to increase the processing power of future data centers beyond today\'s maximum. This work enhances an existing framework to support concurrent users on a virtualized reconfigurable FPGA resource. The FPGAs are used to provide a flexible, fast and very efficient platform for the user who has access through a simple cloud based interface. A fast partial reconfiguration is achieved through the ICAP combined with a PCIe connection and a combination of custom and TCL scripts to control the tool flow. This allows for a reconfiguration of a user space on a FPGA in a few milliseconds while providing a simple single-action interface to the user

Extending the PCIe Interface with Parallel Compression/Decompression Hardware for Energy and Performance Optimization

PCIe is a high-performing interface used to move data from a central host PC to an accelerator such as Field Programmable Gate Arrays (FPGA). This interface allows a system to perform fast data transfers in High-Performance Computing (HPC) and provide a performance boost. However, HPC systems normally require large datasets, and in these situations PCIe can become a bottleneck. To address this issue, we propose an open-source hardware compression/decompression system that can be used to adapt with continuously-streamed data with low latency and high throughput. We implement a compressor and decompressor engines on FPGA, scale up with multiple engines working in parallel, and evaluate the energy reduction and performance with different numbers of multiple engines. To alleviate the performance bottleneck in the processor acting as a controller, we propose a hardware scheduler to fairly distribute the datasets among the engines. Our design reduces the transmission time in PCIe, and the results show an energy reduction of up to 48% in the PCIe transfers, thanks to the decrease in the number of bits that have to be transmitted. The overhead in terms of latency is maintained to a minimum and user selectable depending on the tolerances of the intended application

Hardware Accelerated DNA Sequencing

DNA sequencing technology is quickly evolving. The latest developments ex- ploit nanopore sensing and microelectronics to realize real-time, hand-held devices. A critical limitation in these portable sequencing machines is the requirement of powerful data processing consoles, a need incompatible with portability and wide deployment. This thesis proposes a rst step towards addressing this problem, the construction of specialized computing modules { hardware accelerators { that can execute the required computations in real-time, within a small footprint, and at a fraction of the power needed by conventional computers. Such a hardware accel- erator, in FPGA form, is introduced and optimized specically for the basecalling function of the DNA sequencing pipeline. Key basecalling computations are identi- ed and ported to custom FPGA hardware. Remaining basecalling operations are maintained in a traditional CPU which maintains constant communications with its FPGA accelerator over the PCIe bus. Measured results demonstrated a 137X basecalling speed improvement over CPU-only methods while consuming 17X less power than a CPU-only method

Scalable High-Speed Communications for Neuromorphic Systems

Field-programmable gate arrays (FPGA), application-specific integrated circuits (ASIC), and other chip/multi-chip level implementations can be used to implement Dynamic Adaptive Neural Network Arrays (DANNA). In some applications, DANNA interfaces with a traditional computing system to provide neural network configuration information, provide network input, process network outputs, and monitor the state of the network. The present host-to-DANNA network communication setup uses a Cypress USB 3.0 peripheral controller (FX3) to enable host-to-array communication over USB 3.0. This communications setup has to run commands in batches and does not have enough bandwidth to meet the maximum throughput requirements of the DANNA device, resulting in output packet loss. Also, the FX3 is unable to scale to support larger single-chip or multi-chip configurations. To alleviate communication limitations and to expand scalability, a new communications solution is presented which takes advantage of the GTX/GTH high-speed serial transceivers found on Xilinx FPGAs. A Xilinx VC707 evaluation kit is used to prototype the new communications board. The high-speed transceivers are used to communicate to the host computer via PCIe and to communicate to the DANNA arrays with the link layer protocol Aurora. The new communications board is able to outperform the FX3, reducing the latency in the communication and increasing the throughput of data. This new communications setup will be used to further DANNA research by allowing the DANNA arrays to scale to larger sizes and for multiple DANNA arrays to be connected to a single communication board

Solutions for the optimization of the software interface on an FPGA-based NIC

The theme of the research is the study of solutions for the optimization of the software interface on FPGA-based Network Interface Cards. The research activity was carried out in the APE group at INFN (Istituto Nazionale di Fisica Nucleare), which has been historically active in designing of high performance scalable networks for hybrid nodes (CPU/GPU) clusters. The result of the research is validated on two projects the APE group is currently working on, both allowing fast prototyping for solutions and hardware-software co-design: APEnet (a PCIe FPGA-based 3D torus network controller) and NaNet (FPGA-based family of NICs mainly dedicated to real-time, low-latency computing systems such as fast control systems or High Energy Physics Data Acquisition Systems). NaNet is also used to validate a GPU-controlled device driver to improve network perfomances, i.e. even lower latency of the communication, while used in combination with existing user-space software. This research is also gaining results in the "Horizon2020 FET-HPC ExaNeSt project", which aims to prototype and develop solutions for some of the crucial problems on the way towards production of Exascale-level Supercomputers, where the APE group is actively contribuiting to the development of the network / interconnection infrastructure

Analysis and optimization of a debug post-silicon hardware architecture

The goal of this thesis is to analyze the post-silicon validation hardware infrastructure implemented on multicore systems taking as an example Esperanto Technologies SoC, which has thousands of RISC-V processors and targets specific software applications. Then, based on the conclusions of the analysis, the project proposes a new post-silicon debug architecture that can fit on any System on-Chip without depending on its target application or complexity and that optimizes the options available on the market for multicore systems