5,738 research outputs found
To boldly go:an occam-π mission to engineer emergence
Future systems will be too complex to design and implement explicitly. Instead, we will have to learn to engineer complex behaviours indirectly: through the discovery and application of local rules of behaviour, applied to simple process components, from which desired behaviours predictably emerge through dynamic interactions between massive numbers of instances. This paper describes a process-oriented architecture for fine-grained concurrent systems that enables experiments with such indirect engineering. Examples are presented showing the differing complex behaviours that can arise from minor (non-linear) adjustments to low-level parameters, the difficulties in suppressing the emergence of unwanted (bad) behaviour, the unexpected relationships between apparently unrelated physical phenomena (shown up by their separate emergence from the same primordial process swamp) and the ability to explore and engineer completely new physics (such as force fields) by their emergence from low-level process interactions whose mechanisms can only be imagined, but not built, at the current time
Reachability in Parametric Interval Markov Chains using Constraints
Parametric Interval Markov Chains (pIMCs) are a specification formalism that
extend Markov Chains (MCs) and Interval Markov Chains (IMCs) by taking into
account imprecision in the transition probability values: transitions in pIMCs
are labeled with parametric intervals of probabilities. In this work, we study
the difference between pIMCs and other Markov Chain abstractions models and
investigate the two usual semantics for IMCs: once-and-for-all and
at-every-step. In particular, we prove that both semantics agree on the
maximal/minimal reachability probabilities of a given IMC. We then investigate
solutions to several parameter synthesis problems in the context of pIMCs --
consistency, qualitative reachability and quantitative reachability -- that
rely on constraint encodings. Finally, we propose a prototype implementation of
our constraint encodings with promising results
Extending Hybrid CSP with Probability and Stochasticity
Probabilistic and stochastic behavior are omnipresent in computer controlled
systems, in particular, so-called safety-critical hybrid systems, because of
fundamental properties of nature, uncertain environments, or simplifications to
overcome complexity. Tightly intertwining discrete, continuous and stochastic
dynamics complicates modelling, analysis and verification of stochastic hybrid
systems (SHSs). In the literature, this issue has been extensively
investigated, but unfortunately it still remains challenging as no promising
general solutions are available yet. In this paper, we give our effort by
proposing a general compositional approach for modelling and verification of
SHSs. First, we extend Hybrid CSP (HCSP), a very expressive and process
algebra-like formal modeling language for hybrid systems, by introducing
probability and stochasticity to model SHSs, which is called stochastic HCSP
(SHCSP). To this end, ordinary differential equations (ODEs) are generalized by
stochastic differential equations (SDEs) and non-deterministic choice is
replaced by probabilistic choice. Then, we extend Hybrid Hoare Logic (HHL) to
specify and reason about SHCSP processes. We demonstrate our approach by an
example from real-world.Comment: The conference version of this paper is accepted by SETTA 201
Reduction of dynamical biochemical reaction networks in computational biology
Biochemical networks are used in computational biology, to model the static
and dynamical details of systems involved in cell signaling, metabolism, and
regulation of gene expression. Parametric and structural uncertainty, as well
as combinatorial explosion are strong obstacles against analyzing the dynamics
of large models of this type. Multi-scaleness is another property of these
networks, that can be used to get past some of these obstacles. Networks with
many well separated time scales, can be reduced to simpler networks, in a way
that depends only on the orders of magnitude and not on the exact values of the
kinetic parameters. The main idea used for such robust simplifications of
networks is the concept of dominance among model elements, allowing
hierarchical organization of these elements according to their effects on the
network dynamics. This concept finds a natural formulation in tropical
geometry. We revisit, in the light of these new ideas, the main approaches to
model reduction of reaction networks, such as quasi-steady state and
quasi-equilibrium approximations, and provide practical recipes for model
reduction of linear and nonlinear networks. We also discuss the application of
model reduction to backward pruning machine learning techniques
A geometric method for model reduction of biochemical networks with polynomial rate functions
Model reduction of biochemical networks relies on the knowledge of slow and
fast variables. We provide a geometric method, based on the Newton polytope, to
identify slow variables of a biochemical network with polynomial rate
functions. The gist of the method is the notion of tropical equilibration that
provides approximate descriptions of slow invariant manifolds. Compared to
extant numerical algorithms such as the intrinsic low dimensional manifold
method, our approach is symbolic and utilizes orders of magnitude instead of
precise values of the model parameters. Application of this method to a large
collection of biochemical network models supports the idea that the number of
dynamical variables in minimal models of cell physiology can be small, in spite
of the large number of molecular regulatory actors
Finite memory devices in CSP
It is often said that a state based approach to CSP is inadequate, however we present here some (theoretical) hints against this assertion. A new class of processes modelled by finite memory devices are considered. These devices (called here CSP automata) allow both: deal with the different kinds of nondeterminism at a state level and model misbehaviours due to divergences. They are well adapted to the semantics of failures plus divergences. As CSP is independent of branching time CSP-automata can be determinized. Furthermore we show that an extension of the classical automata's morphism is equivalent to refinement between processes. That allow us to define canonical forms through minimization. These processes can also be characterized by a set of recursive equations so called linear systems. These processes are stable under nondeterminism, change of symbol, prefixing and interleaving.Postprint (published version
CASP Solutions for Planning in Hybrid Domains
CASP is an extension of ASP that allows for numerical constraints to be added
in the rules. PDDL+ is an extension of the PDDL standard language of automated
planning for modeling mixed discrete-continuous dynamics.
In this paper, we present CASP solutions for dealing with PDDL+ problems,
i.e., encoding from PDDL+ to CASP, and extensions to the algorithm of the EZCSP
CASP solver in order to solve CASP programs arising from PDDL+ domains. An
experimental analysis, performed on well-known linear and non-linear variants
of PDDL+ domains, involving various configurations of the EZCSP solver, other
CASP solvers, and PDDL+ planners, shows the viability of our solution.Comment: Under consideration in Theory and Practice of Logic Programming
(TPLP
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