Geographica: A Benchmark for Geospatial RDF Stores

Geospatial extensions of SPARQL like GeoSPARQL and stSPARQL have recently been defined and corresponding geospatial RDF stores have been implemented. However, there is no widely used benchmark for evaluating geospatial RDF stores which takes into account recent advances to the state of the art in this area. In this paper, we develop a benchmark, called Geographica, which uses both real-world and synthetic data to test the offered functionality and the performance of some prominent geospatial RDF stores

Performance assessment of RDF graph databases for smart city services

Abstract Smart cities are providing advanced services aggregating and exploiting data from different sources. Cities collect static data such as road graphs, service description, as well as dynamic/real time data like weather forecast, traffic sensors, bus positions, city sensors, events, emergency data, flows, etc. RDF stores may be used to set up knowledge bases integrating heterogeneous information for web and mobile applications to use the data for new advanced services to citizens and city administrators, thus exploiting inferential capabilities, temporal and spatial reasoning, and text indexing. In this paper, the needs and constraints for RDF stores to be used for smart cities services, together with the currently available RDF stores are evaluated. The assessment model allows a full understanding of whether an RDF store is suitable to be used as a basis for Smart City modeling and applications. The RDF assessment model is also supported by a benchmark which extends available RDF store benchmarks at the state the art. The comparison of the RDF stores has been applied on a number of well-known RDF stores as Virtuoso, GraphDB (former OWLIM), Oracle, StarDog, and many others. The paper also reports the adoption of the proposed Smart City RDF Benchmark on the basis of Florence Smart City model, data sets and tools accessible as Km4City Http://www.Km4City.org , and adopted in the European Commission international smart city projects named RESOLUTE H2020, REPLICATE H2020, and in Sii-Mobility National Smart City project in Italy

Exposing Provenance Metadata Using Different RDF Models

A standard model for exposing structured provenance metadata of scientific assertions on the Semantic Web would increase interoperability, discoverability, reliability, as well as reproducibility for scientific discourse and evidence-based knowledge discovery. Several Resource Description Framework (RDF) models have been proposed to track provenance. However, provenance metadata may not only be verbose, but also significantly redundant. Therefore, an appropriate RDF provenance model should be efficient for publishing, querying, and reasoning over Linked Data. In the present work, we have collected millions of pairwise relations between chemicals, genes, and diseases from multiple data sources, and demonstrated the extent of redundancy of provenance information in the life science domain. We also evaluated the suitability of several RDF provenance models for this crowdsourced data set, including the N-ary model, the Singleton Property model, and the Nanopublication model. We examined query performance against three commonly used large RDF stores, including Virtuoso, Stardog, and Blazegraph. Our experiments demonstrate that query performance depends on both RDF store as well as the RDF provenance model

Using RDF to Model the Structure and Process of Systems

Many systems can be described in terms of networks of discrete elements and their various relationships to one another. A semantic network, or multi-relational network, is a directed labeled graph consisting of a heterogeneous set of entities connected by a heterogeneous set of relationships. Semantic networks serve as a promising general-purpose modeling substrate for complex systems. Various standardized formats and tools are now available to support practical, large-scale semantic network models. First, the Resource Description Framework (RDF) offers a standardized semantic network data model that can be further formalized by ontology modeling languages such as RDF Schema (RDFS) and the Web Ontology Language (OWL). Second, the recent introduction of highly performant triple-stores (i.e. semantic network databases) allows semantic network models on the order of $10^9$ edges to be efficiently stored and manipulated. RDF and its related technologies are currently used extensively in the domains of computer science, digital library science, and the biological sciences. This article will provide an introduction to RDF/RDFS/OWL and an examination of its suitability to model discrete element complex systems.Comment: International Conference on Complex Systems, Boston MA, October 200

Self-organizing Structured RDF in MonetDB

The semantic web uses RDF as its data model, providing ultimate flexibility for users to represent and evolve data without need of a schema. Yet, this flexibility poses challenges in implementing efficient RDF stores, leading from plans with very many self-joins to a triple table, difficulties to optimize these, and a lack of data locality since without a notion of multi-attribute data structure, clustered indexing opportunities are lost. Apart from performance issues, users of huge RDF graphs often have problems formulating queries as they lack any system-supported notion of the structure in the data. In this research, we exploit the observation that real RDF data, while not as regularly structured as relational data, still has the great majority of triples conforming to regular patterns. We conjecture that a system that would recognize this structure automatically would both allow RDF stores to become more efficient and also easier to use. Concretely, we propose to derive self-organizing RDF that stores data in PSO format in such a way that the regular parts of the data physically correspond to relational columnar storage; and propose RDFscan/RDFjoin algorithms that compute star-patterns over these without wasting effort in self-joins. These regular parts, i.e. tables, are identified on ingestion by a schema discovery algorithm -- as such users will gain an SQL view of the regular part of the RDF data. This research aims to produce a state-of-the-art SPARQL frontend for MonetDB as a by-product, and we already present some preliminary results on this platform

Semantic Storage: Overview and Assessment

The Semantic Web has a great deal of momentum behind it. The promise of a ‘better web’, where information is given well defined meaning and computers are better able to work with it has captured the imagination of a significant number of people, particularly in academia. Language standards such as RDF and OWL have appeared with remarkable speed, and development continues apace. To back up this development, there is a requirement for ‘semantic databases’, where this data can be conveniently stored, operated upon, and retrieved. These already exist in the form of triple stores, but do not yet fulfil all the requirements that may be made of them, particularly in the area of performing inference using OWL. This paper analyses the current stores along with forthcoming technology, and finds that it is unlikely that a combination of speed, scalability, and complex inferencing will be practical in the immediate future. It concludes by suggesting alternative development routes

Incremental characterization of RDF Triple Stores

Many semantic web applications integrate data from distributed triple stores and to be efficient, they need to know what kind of content each triple store holds in order to assess if it can contribute to its queries. We present an algorithm to build indexes summarizing the content of triple stores. We extended Depth-First Search coding to provide a canonical representation of RDF graphs and we introduce a new join operator between two graph codes to optimize the generation of an index. We provide an incremental update algorithm and conclude with tests on real datasets