Fuzzy-based Propagation of Prior Knowledge to Improve Large-Scale Image Analysis Pipelines

Many automatically analyzable scientific questions are well-posed and offer a variety of information about the expected outcome a priori. Although often being neglected, this prior knowledge can be systematically exploited to make automated analysis operations sensitive to a desired phenomenon or to evaluate extracted content with respect to this prior knowledge. For instance, the performance of processing operators can be greatly enhanced by a more focused detection strategy and the direct information about the ambiguity inherent in the extracted data. We present a new concept for the estimation and propagation of uncertainty involved in image analysis operators. This allows using simple processing operators that are suitable for analyzing large-scale 3D+t microscopy images without compromising the result quality. On the foundation of fuzzy set theory, we transform available prior knowledge into a mathematical representation and extensively use it enhance the result quality of various processing operators. All presented concepts are illustrated on a typical bioimage analysis pipeline comprised of seed point detection, segmentation, multiview fusion and tracking. Furthermore, the functionality of the proposed approach is validated on a comprehensive simulated 3D+t benchmark data set that mimics embryonic development and on large-scale light-sheet microscopy data of a zebrafish embryo. The general concept introduced in this contribution represents a new approach to efficiently exploit prior knowledge to improve the result quality of image analysis pipelines. Especially, the automated analysis of terabyte-scale microscopy data will benefit from sophisticated and efficient algorithms that enable a quantitative and fast readout. The generality of the concept, however, makes it also applicable to practically any other field with processing strategies that are arranged as linear pipelines.Comment: 39 pages, 12 figure

Consensus image method for unknown noise removal

Noise removal has been, and it is nowadays, an important task in computer vision. Usually, it is a previous task preceding other tasks, as segmentation or reconstruction. However, for most existing denoising algorithms the noise model has to be known in advance. In this paper, we introduce a new approach based on consensus to deal with unknown noise models. To do this, different filtered images are obtained, then combined using multifuzzy sets and averaging aggregation functions. The final decision is made by using a penalty function to deliver the compromised image. Results show that this approach is consistent and provides a good compromise between filters.This work is supported by the European Commission under Contract No. 238819 (MIBISOC Marie Curie ITN). H. Bustince was supported by Project TIN 2010-15055 of the Spanish Ministry of Science

Multi-Sensor Image Fusion Based on Moment Calculation

An image fusion method based on salient features is proposed in this paper. In this work, we have concentrated on salient features of the image for fusion in order to preserve all relevant information contained in the input images and tried to enhance the contrast in fused image and also suppressed noise to a maximum extent. In our system, first we have applied a mask on two input images in order to conserve the high frequency information along with some low frequency information and stifle noise to a maximum extent. Thereafter, for identification of salience features from sources images, a local moment is computed in the neighborhood of a coefficient. Finally, a decision map is generated based on local moment in order to get the fused image. To verify our proposed algorithm, we have tested it on 120 sensor image pairs collected from Manchester University UK database. The experimental results show that the proposed method can provide superior fused image in terms of several quantitative fusion evaluation index.Comment: 5 pages, International Conferenc

Medical Diagnosis with Multimodal Image Fusion Techniques

Image Fusion is an effective approach utilized to draw out all the significant information from the source images, which supports experts in evaluation and quick decision making. Multi modal medical image fusion produces a composite fused image utilizing various sources to improve quality and extract complementary information. It is extremely challenging to gather every piece of information needed using just one imaging method. Therefore, images obtained from different modalities are fused Additional clinical information can be gleaned through the fusion of several types of medical image pairings. This study's main aim is to present a thorough review of medical image fusion techniques which also covers steps in fusion process, levels of fusion, various imaging modalities with their pros and cons, and  the major scientific difficulties encountered in the area of medical image fusion. This paper also summarizes the quality assessments fusion metrics. The various approaches used by image fusion algorithms that are presently available in the literature are classified into four broad categories i) Spatial fusion methods ii) Multiscale Decomposition based methods iii) Neural Network based methods and iv) Fuzzy Logic based methods. the benefits and pitfalls of the existing literature are explored and Future insights are suggested. Moreover, this study is anticipated to create a solid platform for the development of better fusion techniques in medical applications