A Unifying Theory for Graph Transformation

The field of graph transformation studies the rule-based transformation of graphs. An important branch is the algebraic graph transformation tradition, in which approaches are defined and studied using the language of category theory. Most algebraic graph transformation approaches (such as DPO, SPO, SqPO, and AGREE) are opinionated about the local contexts that are allowed around matches for rules, and about how replacement in context should work exactly. The approaches also differ considerably in their underlying formal theories and their general expressiveness (e.g., not all frameworks allow duplication). This dissertation proposes an expressive algebraic graph transformation approach, called PBPO+, which is an adaptation of PBPO by Corradini et al. The central contribution is a proof that PBPO+ subsumes (under mild restrictions) DPO, SqPO, AGREE, and PBPO in the important categorical setting of quasitoposes. This result allows for a more unified study of graph transformation metatheory, methods, and tools. A concrete example of this is found in the second major contribution of this dissertation: a graph transformation termination method for PBPO+, based on decreasing interpretations, and defined for general categories. By applying the proposed encodings into PBPO+, this method can also be applied for DPO, SqPO, AGREE, and PBPO

Construction of Pushout Complements in the Category of Hypergraphs

We describe a concrete construction of all pushout complements for two given morphisms f : A -> B, m: B -> D in the category of hypergraphs, valid also for the case where f, m are non-injective. It is based on the generation of suitable equivalence relations. We also give a combinatorial interpretation and show how well-known coefficients from combinatorics, such as the Bell numbers, can be recovered. Furthermore we present a formula that can be used to compute the number of pushout complements for two given morphisms

Rewriting Abstract Structures: Materialization Explained Categorically

The paper develops an abstract (over-approximating) semantics for double-pushout rewriting of graphs and graph-like objects. The focus is on the so-called materialization of left-hand sides from abstract graphs, a central concept in previous work. The first contribution is an accessible, general explanation of how materializations arise from universal properties and categorical constructions, in particular partial map classifiers, in a topos. Second, we introduce an extension by enriching objects with annotations and give a precise characterization of strongest post-conditions, which are effectively computable under certain assumptions

Processes and unfoldings: concurrent computations in adhesive categories

We generalise both the notion of non-sequential process and the unfolding construction (previously developed for concrete formalisms such as Petri nets and graph grammars) to the abstract setting of (single pushout) rewriting of objects in adhesive categories. The main results show that processes are in one-to-one correspondence with switch-equivalent classes of derivations, and that the unfolding construction can be characterised as a coreflection, i.e., the unfolding functor arises as the right adjoint to the embedding of the category of occurrence grammars into the category of grammars. As the unfolding represents potentially infinite computations, we need to work in adhesive categories with "well-behaved" colimits of omega-chains of monos. Compared to previous work on the unfolding of Petri nets and graph grammars, our results apply to a wider class of systems, which is due to the use of a refined notion of grammar morphism

Formal Foundations for Information-Preserving Model Synchronization Processes Based on Triple Graph Grammars

Zwischen verschiedenen Artefakten, die Informationen teilen, wieder Konsistenz herzustellen, nachdem eines von ihnen geändert wurde, ist ein wichtiges Problem, das in verschiedenen Bereichen der Informatik auftaucht. Mit dieser Dissertation legen wir eine Lösung für das grundlegende Modellsynchronisationsproblem vor. Bei diesem Problem ist ein Paar solcher Artefakte (Modelle) gegeben, von denen eines geändert wurde; Aufgabe ist die Wiederherstellung der Konsistenz. Tripelgraphgrammatiken (TGGs) sind ein etablierter und geeigneter Formalismus, um dieses und verwandte Probleme anzugehen. Da sie auf der algebraischen Theorie der Graphtransformation und dem (Double-)Pushout Zugang zu Ersetzungssystemen basieren, sind sie besonders geeignet, um Lösungen zu entwickeln, deren Eigenschaften formal bewiesen werden können. Doch obwohl TGG-basierte Ansätze etabliert sind, leiden viele von ihnen unter dem Problem des Informationsverlustes. Wenn ein Modell geändert wurde, können während eines Synchronisationsprozesses Informationen verloren gehen, die nur im zweiten Modell vorliegen. Das liegt daran, dass solche Synchronisationsprozesse darauf zurückfallen Konsistenz dadurch wiederherzustellen, dass sie das geänderte Modell (bzw. große Teile von ihm) neu übersetzen. Wir schlagen einen TGG-basierten Ansatz vor, der fortgeschrittene Features von TGGs unterstützt (Attribute und negative Constraints), durchgängig formalisiert ist, implementiert und inkrementell in dem Sinne ist, dass er den Informationsverlust im Vergleich mit vorherigen Ansätzen drastisch reduziert. Bisher gibt es keinen TGG-basierten Ansatz mit vergleichbaren Eigenschaften. Zentraler Beitrag dieser Dissertation ist es, diesen Ansatz formal auszuarbeiten und seine wesentlichen Eigenschaften, nämlich Korrektheit, Vollständigkeit und Termination, zu beweisen. Die entscheidende neue Idee unseres Ansatzes ist es, Reparaturregeln anzuwenden. Dies sind spezielle Regeln, die es erlauben, Änderungen an einem Modell direkt zu propagieren anstatt auf Neuübersetzung zurückzugreifen. Um diese Reparaturregeln erstellen und anwenden zu können, entwickeln wir grundlegende Beiträge zur Theorie der algebraischen Graphtransformation. Zunächst entwickeln wir eine neue Art der sequentiellen Komposition von Regeln. Im Gegensatz zur gewöhnlichen Komposition, die zu Regeln führt, die Elemente löschen und dann wieder neu erzeugen, können wir Regeln herleiten, die solche Elemente stattdessen bewahren. Technisch gesehen findet der Synchronisationsprozess, den wir entwickeln, außerdem in der Kategorie der partiellen Tripelgraphen statt und nicht in der der normalen Tripelgraphen. Daher müssen wir sicherstellen, dass die für Double-Pushout-Ersetzungssysteme ausgearbeitete Theorie immer noch gültig ist. Dazu entwickeln wir eine (kategorientheoretische) Konstruktion neuer Kategorien aus gegebenen und zeigen, dass (i) diese Konstruktion die Axiome erhält, die nötig sind, um die Theorie für Double-Pushout-Ersetzungssysteme zu entwickeln, und (ii) partielle Tripelgraphen als eine solche Kategorie konstruiert werden können. Zusammen ermöglichen diese beiden grundsätzlichen Beiträge es uns, unsere Lösung für das grundlegende Modellsynchronisationsproblem vollständig formal auszuarbeiten und ihre zentralen Eigenschaften zu beweisen.Restoring consistency between different information-sharing artifacts after one of them has been changed is an important problem that arises in several areas of computer science. In this thesis, we provide a solution to the basic model synchronization problem. There, a pair of such artifacts (models), one of which has been changed, is given and consistency shall be restored. Triple graph grammars (TGGs) are an established and suitable formalism to address this and related problems. Being based on the algebraic theory of graph transformation and (double-)pushout rewriting, they are especially suited to develop solutions whose properties can be formally proven. Despite being established, many TGG-based solutions do not satisfactorily deal with the problem of information loss. When one model is changed, in the process of restoring consistency such solutions may lose information that is only present in the second model because the synchronization process resorts to restoring consistency by re-translating (large parts of) the updated model. We introduce a TGG-based approach that supports advanced features of TGGs (attributes and negative constraints), is comprehensively formalized, implemented, and is incremental in the sense that it drastically reduces the amount of information loss compared to former approaches. Up to now, a TGG-based approach with these characteristics is not available. The central contribution of this thesis is to formally develop that approach and to prove its essential properties, namely correctness, completeness, and termination. The crucial new idea in our approach is the use of repair rules, which are special rules that allow one to directly propagate changes from one model to the other instead of resorting to re-translation. To be able to construct and apply these repair rules, we contribute more fundamentally to the theory of algebraic graph transformation. First, we develop a new kind of sequential rule composition. Whereas the conventional composition of rules leads to rules that delete and re-create elements, we can compute rules that preserve such elements instead. Furthermore, technically the setting in which the synchronization process we develop takes place is the category of partial triple graphs and not the one of ordinary triple graphs. Hence, we have to ensure that the elaborate theory of double-pushout rewriting still applies. Therefore, we develop a (category-theoretic) construction of new categories from given ones and show that (i) this construction preserves the axioms that are necessary to develop the theory of double-pushout rewriting and (ii) partial triple graphs can be constructed as such a category. Together, those two more fundamental contributions enable us to develop our solution to the basic model synchronization problem in a fully formal manner and to prove its central properties

A Category Theoretical Approach to the Concurrent Semantics of Rewriting: Adhesive Categories and Related Concepts

This thesis studies formal semantics for a family of rewriting formalisms that have arisen as category theoretical abstractions of the so-called algebraic approaches to graph rewriting. The latter in turn generalize and combine features of term rewriting and Petri nets. Two salient features of (the abstract versions of) graph rewriting are a suitable class of categories which captures the structure of the objects of rewriting, and a notion of independence or concurrency of rewriting steps – as in the theory of Petri nets. Category theoretical abstractions of graph rewriting such as double pushout rewriting encapsulate the complex details of the structures that are to be rewritten by considering them as objects of a suitable abstract category, for example an adhesive one. The main difficulty of the development of appropriate categorical frameworks is the identification of the essential properties of the category of graphs which allow to develop the theory of graph rewriting in an abstract framework. The motivations for such an endeavor are twofold: to arrive at a succint description of the fundamental principles of rewriting systems in general, and to apply well-established verification and analysis techniques of the theory of Petri nets (and also term rewriting systems) to a wide range of distributed and concurrent systems in which states have a "graph-like" structure. The contributions of this thesis thus can be considered as two sides of the same coin: on the one side, concepts and results for Petri nets (and graph grammars) are generalized to an abstract category theoretical setting; on the other side, suitable classes of "graph-like" categories which capture the essential properties of the category of graphs are identified. Two central results are the following: first, (concatenable) processes are faithful partial order representations of equivalence classes of system runs which only differ w.r.t. the rescheduling of causally independent events; second, the unfolding of a system is established as the canonical partial order representation of all possible events (following the work of Winskel). Weakly ω-adhesive categories are introduced as the theoretical foundation for the corresponding formal theorems about processes and unfoldings. The main result states that an unfolding procedure for systems which are given as single pushout grammars in weakly ω-adhesive categories exists and can be characetrised as a right adjoint functor from a category of grammars to the subcategory of occurrence grammars. This result specializes to and improves upon existing results concerning the coreflective semantics of the unfolding of graph grammars and Petri nets (under an individual token interpretation). Moreover, the unfolding procedure is in principle usable as the starting point for static analysis techniques such as McMillan’s finite complete prefix method. Finally, the adequacy of weakly ω-adhesive categories as a categorical framework is argued for by providing a comparison with the notion of topos, which is a standard abstraction of the categories of sets (and graphs)

Pictures of Processes: Automated Graph Rewriting for Monoidal Categories and Applications to Quantum Computing

This work is about diagrammatic languages, how they can be represented, and what they in turn can be used to represent. More specifically, it focuses on representations and applications of string diagrams. String diagrams are used to represent a collection of processes, depicted as "boxes" with multiple (typed) inputs and outputs, depicted as "wires". If we allow plugging input and output wires together, we can intuitively represent complex compositions of processes, formalised as morphisms in a monoidal category. [...] The first major contribution of this dissertation is the introduction of a discretised version of a string diagram called a string graph. String graphs form a partial adhesive category, so they can be manipulated using double-pushout graph rewriting. Furthermore, we show how string graphs modulo a rewrite system can be used to construct free symmetric traced and compact closed categories on a monoidal signature. The second contribution is in the application of graphical languages to quantum information theory. We use a mixture of diagrammatic and algebraic techniques to prove a new classification result for strongly complementary observables. [...] We also introduce a graphical language for multipartite entanglement and illustrate a simple graphical axiom that distinguishes the two maximally-entangled tripartite qubit states: GHZ and W. [...] The third contribution is a description of two software tools developed in part by the author to implement much of the theoretical content described here. The first tool is Quantomatic, a desktop application for building string graphs and graphical theories, as well as performing automated graph rewriting visually. The second is QuantoCoSy, which performs fully automated, model-driven theory creation using a procedure called conjecture synthesis.Comment: PhD Thesis. Passed examination. Minor corrections made and one theorem added at the end of Chapter 5. 182 pages, ~300 figures. See full text for unabridged abstrac

Coupled Transformations of Graph Structures applied to Model Migration

Model-Driven Engineering (MDE) is a relatively new paradigm in software engineering that pursues the goal to master the increased complexity of modern software products. While software applications have been developed for a specific platform in the past, today they are targeting various platforms and devices from classical desktop PCs to smart phones. In addition, they interact with other applications. To easier cope with these new requirements, software applications are specified in MDE at a high abstraction level in so called models prior to their implementation. Afterward, model transformations are used to automate recurring development tasks as well as to generate software artifacts for different runtime environments. Thereby, software artifacts are not necessarily files containing program code, they can also cover configuration files as well as machine readable input for model checking tools. However, MDE does not only address software engineering problems, it also raises new challenges. One of these new challenges is connected to the specification of modeling languages, which are used to create models. The creation of a modeling language is a creative process that requires several iterations similar to the creation of models. New requirements as well as a better understanding of the application domain result in an evolution of modeling languages over time. Models developed in an earlier version of a modeling language often needs to be co-adopted (migrated) to language changes. This migration should be automated, as migrating models manually is time consuming and error-prone. While application modelers use ad-hoc solutions to migrate their models, there is still a lack of theory to ensure well-defined migration results. This work contributes to a formalization of modeling language evolution with corresponding model migration on the basis of algebraic graph transformations that have successfully been used earlier as theoretical foundations of model transformation. The goal of this research is to develop a theory that considers the problem of modeling language evolution with corresponding model migration on a conceptual level, independent of a specific modeling framework