Solving Hard Computational Problems Efficiently: Asymptotic Parametric Complexity 3-Coloring Algorithm

Many practical problems in almost all scientific and technological disciplines have been classified as computationally hard (NP-hard or even NP-complete). In life sciences, combinatorial optimization problems frequently arise in molecular biology, e.g., genome sequencing; global alignment of multiple genomes; identifying siblings or discovery of dysregulated pathways.In almost all of these problems, there is the need for proving a hypothesis about certain property of an object that can be present only when it adopts some particular admissible structure (an NP-certificate) or be absent (no admissible structure), however, none of the standard approaches can discard the hypothesis when no solution can be found, since none can provide a proof that there is no admissible structure. This article presents an algorithm that introduces a novel type of solution method to "efficiently" solve the graph 3-coloring problem; an NP-complete problem. The proposed method provides certificates (proofs) in both cases: present or absent, so it is possible to accept or reject the hypothesis on the basis of a rigorous proof. It provides exact solutions and is polynomial-time (i.e., efficient) however parametric. The only requirement is sufficient computational power, which is controlled by the parameter $\alpha\in\mathbb{N}$. Nevertheless, here it is proved that the probability of requiring a value of $\alpha>k$ to obtain a solution for a random graph decreases exponentially: $P(\alpha>k) \leq 2^{-(k+1)}$, making tractable almost all problem instances. Thorough experimental analyses were performed. The algorithm was tested on random graphs, planar graphs and 4-regular planar graphs. The obtained experimental results are in accordance with the theoretical expected results.Comment: Working pape

Hybrid VCSPs with crisp and conservative valued templates

A constraint satisfaction problem (CSP) is a problem of computing a homomorphism ${\bf R} \rightarrow {\bf \Gamma}$ between two relational structures. Analyzing its complexity has been a very fruitful research direction, especially for fixed template CSPs, denoted $CSP({\bf \Gamma})$, in which the right side structure ${\bf \Gamma}$ is fixed and the left side structure ${\bf R}$ is unconstrained. Recently, the hybrid setting, written $CSP_{\mathcal{H}}({\bf \Gamma})$, where both sides are restricted simultaneously, attracted some attention. It assumes that ${\bf R}$ is taken from a class of relational structures $\mathcal{H}$ that additionally is closed under inverse homomorphisms. The last property allows to exploit algebraic tools that have been developed for fixed template CSPs. The key concept that connects hybrid CSPs with fixed-template CSPs is the so called "lifted language". Namely, this is a constraint language ${\bf \Gamma}_{{\bf R}}$ that can be constructed from an input ${\bf R}$. The tractability of that language for any input ${\bf R}\in\mathcal{H}$ is a necessary condition for the tractability of the hybrid problem. In the first part we investigate templates ${\bf \Gamma}$ for which the latter condition is not only necessary, but also is sufficient. We call such templates ${\bf \Gamma}$ widely tractable. For this purpose, we construct from ${\bf \Gamma}$ a new finite relational structure ${\bf \Gamma}'$ and define $\mathcal{H}_0$ as a class of structures homomorphic to ${\bf \Gamma}'$. We prove that wide tractability is equivalent to the tractability of $CSP_{\mathcal{H}_0}({\bf \Gamma})$. Our proof is based on the key observation that ${\bf R}$ is homomorphic to ${\bf \Gamma}'$ if and only if the core of ${\bf \Gamma}_{{\bf R}}$ is preserved by a Siggers polymorphism. Analogous result is shown for valued conservative CSPs.Comment: 21 pages. arXiv admin note: text overlap with arXiv:1504.0706

Statistical Physics of Hard Optimization Problems

Optimization is fundamental in many areas of science, from computer science and information theory to engineering and statistical physics, as well as to biology or social sciences. It typically involves a large number of variables and a cost function depending on these variables. Optimization problems in the NP-complete class are particularly difficult, it is believed that the number of operations required to minimize the cost function is in the most difficult cases exponential in the system size. However, even in an NP-complete problem the practically arising instances might, in fact, be easy to solve. The principal question we address in this thesis is: How to recognize if an NP-complete constraint satisfaction problem is typically hard and what are the main reasons for this? We adopt approaches from the statistical physics of disordered systems, in particular the cavity method developed originally to describe glassy systems. We describe new properties of the space of solutions in two of the most studied constraint satisfaction problems - random satisfiability and random graph coloring. We suggest a relation between the existence of the so-called frozen variables and the algorithmic hardness of a problem. Based on these insights, we introduce a new class of problems which we named "locked" constraint satisfaction, where the statistical description is easily solvable, but from the algorithmic point of view they are even more challenging than the canonical satisfiability.Comment: PhD thesi

Logic Column 17: A Rendezvous of Logic, Complexity, and Algebra

This article surveys recent advances in applying algebraic techniques to constraint satisfaction problems.Comment: 30 page