Forward Analysis and Model Checking for Trace Bounded WSTS

We investigate a subclass of well-structured transition systems (WSTS), the bounded---in the sense of Ginsburg and Spanier (Trans. AMS 1964)---complete deterministic ones, which we claim provide an adequate basis for the study of forward analyses as developed by Finkel and Goubault-Larrecq (Logic. Meth. Comput. Sci. 2012). Indeed, we prove that, unlike other conditions considered previously for the termination of forward analysis, boundedness is decidable. Boundedness turns out to be a valuable restriction for WSTS verification, as we show that it further allows to decide all $\omega$-regular properties on the set of infinite traces of the system

Algorithmic Verification of Asynchronous Programs

Asynchronous programming is a ubiquitous systems programming idiom to manage concurrent interactions with the environment. In this style, instead of waiting for time-consuming operations to complete, the programmer makes a non-blocking call to the operation and posts a callback task to a task buffer that is executed later when the time-consuming operation completes. A co-operative scheduler mediates the interaction by picking and executing callback tasks from the task buffer to completion (and these callbacks can post further callbacks to be executed later). Writing correct asynchronous programs is hard because the use of callbacks, while efficient, obscures program control flow. We provide a formal model underlying asynchronous programs and study verification problems for this model. We show that the safety verification problem for finite-data asynchronous programs is expspace-complete. We show that liveness verification for finite-data asynchronous programs is decidable and polynomial-time equivalent to Petri Net reachability. Decidability is not obvious, since even if the data is finite-state, asynchronous programs constitute infinite-state transition systems: both the program stack and the task buffer of pending asynchronous calls can be potentially unbounded. Our main technical construction is a polynomial-time semantics-preserving reduction from asynchronous programs to Petri Nets and conversely. The reduction allows the use of algorithmic techniques on Petri Nets to the verification of asynchronous programs. We also study several extensions to the basic models of asynchronous programs that are inspired by additional capabilities provided by implementations of asynchronous libraries, and classify the decidability and undecidability of verification questions on these extensions.Comment: 46 pages, 9 figure

A Generic Framework for Reasoning about Dynamic Networks of Infinite-State Processes

We propose a framework for reasoning about unbounded dynamic networks of infinite-state processes. We propose Constrained Petri Nets (CPN) as generic models for these networks. They can be seen as Petri nets where tokens (representing occurrences of processes) are colored by values over some potentially infinite data domain such as integers, reals, etc. Furthermore, we define a logic, called CML (colored markings logic), for the description of CPN configurations. CML is a first-order logic over tokens allowing to reason about their locations and their colors. Both CPNs and CML are parametrized by a color logic allowing to express constraints on the colors (data) associated with tokens. We investigate the decidability of the satisfiability problem of CML and its applications in the verification of CPNs. We identify a fragment of CML for which the satisfiability problem is decidable (whenever it is the case for the underlying color logic), and which is closed under the computations of post and pre images for CPNs. These results can be used for several kinds of analysis such as invariance checking, pre-post condition reasoning, and bounded reachability analysis.Comment: 29 pages, 5 tables, 1 figure, extended version of the paper published in the the Proceedings of TACAS 2007, LNCS 442

Petri nets for systems and synthetic biology

We give a description of a Petri net-based framework for modelling and analysing biochemical pathways, which uni¯es the qualita- tive, stochastic and continuous paradigms. Each perspective adds its con- tribution to the understanding of the system, thus the three approaches do not compete, but complement each other. We illustrate our approach by applying it to an extended model of the three stage cascade, which forms the core of the ERK signal transduction pathway. Consequently our focus is on transient behaviour analysis. We demonstrate how quali- tative descriptions are abstractions over stochastic or continuous descrip- tions, and show that the stochastic and continuous models approximate each other. Although our framework is based on Petri nets, it can be applied more widely to other formalisms which are used to model and analyse biochemical networks

Supporting user-oriented analysis for multi-view domain-specific visual languages

This is the post-print version of the final paper published in Information and Software Technology. The published article is available from the link below. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. Copyright @ 2008 Elsevier B.V.The integration of usable and flexible analysis support in modelling environments is a key success factor in Model-Driven Development. In this paradigm, models are the core asset from which code is automatically generated, and thus ensuring model correctness is a fundamental quality control activity. For this purpose, a common approach is to transform the system models into formal semantic domains for verification. However, if the analysis results are not shown in a proper way to the end-user (e.g. in terms of the original language) they may become useless. In this paper we present a novel DSVL called BaVeL that facilitates the flexible annotation of verification results obtained in semantic domains to different formats, including the context of the original language. BaVeL is used in combination with a consistency framework, providing support for all steps in a verification process: acquisition of additional input data, transformation of the system models into semantic domains, verification, and flexible annotation of analysis results. The approach has been validated analytically by the cognitive dimensions framework, and empirically by its implementation and application to several DSVLs. Here we present a case study of a notation in the area of Digital Libraries, where the analysis is performed by transformations into Petri nets and a process algebra.Spanish Ministry of Education and Science and MODUWEB

A new approach for diagnosability analysis of Petri nets using Verifier Nets

In this paper, we analyze the diagnosability properties of labeled Petri nets. We consider the standard notion of diagnosability of languages, requiring that every occurrence of an unobservable fault event be eventually detected, as well as the stronger notion of diagnosability in K steps, where the detection must occur within a fixed bound of K event occurrences after the fault. We give necessary and sufficient conditions for these two notions of diagnosability for both bounded and unbounded Petri nets and then present an algorithmic technique for testing the conditions based on linear programming. Our approach is novel and based on the analysis of the reachability/coverability graph of a special Petri net, called Verifier Net, that is built from the Petri net model of the given system. In the case of systems that are diagnosable in K steps, we give a procedure to compute the bound K. To the best of our knowledge, this is the first time that necessary and sufficient conditions for diagnosability and diagnosability in K steps of labeled unbounded Petri nets are presented

Small Vertex Cover makes Petri Net Coverability and Boundedness Easier

The coverability and boundedness problems for Petri nets are known to be Expspace-complete. Given a Petri net, we associate a graph with it. With the vertex cover number k of this graph and the maximum arc weight W as parameters, we show that coverability and boundedness are in ParaPspace. This means that these problems can be solved in space O(ef(k,W)poly(n)), where ef(k,W) is some exponential function and poly(n) is some polynomial in the size of the input. We then extend the ParaPspace result to model checking a logic that can express some generalizations of coverability and boundedness.Comment: Full version of the paper appearing in IPEC 201

A Forward Reachability Algorithm for Bounded Timed-Arc Petri Nets

Timed-arc Petri nets (TAPN) are a well-known time extension of the Petri net model and several translations to networks of timed automata have been proposed for this model. We present a direct, DBM-based algorithm for forward reachability analysis of bounded TAPNs extended with transport arcs, inhibitor arcs and age invariants. We also give a complete proof of its correctness, including reduction techniques based on symmetries and extrapolation. Finally, we augment the algorithm with a novel state-space reduction technique introducing a monotonic ordering on markings and prove its soundness even in the presence of monotonicity-breaking features like age invariants and inhibitor arcs. We implement the algorithm within the model-checker TAPAAL and the experimental results document an encouraging performance compared to verification approaches that translate TAPN models to UPPAAL timed automata.Comment: In Proceedings SSV 2012, arXiv:1211.587