Adaptive runtime-assisted block prefetching on chip-multiprocessors

Memory stalls are a significant source of performance degradation in modern processors. Data prefetching is a widely adopted and well studied technique used to alleviate this problem. Prefetching can be performed by the hardware, or be initiated and controlled by software. Among software controlled prefetching we find a wide variety of schemes, including runtime-directed prefetching and more specifically runtime-directed block prefetching. This paper proposes a hybrid prefetching mechanism that integrates a software driven block prefetcher with existing hardware prefetching techniques. Our runtime-assisted software prefetcher brings large blocks of data on-chip with the support of a low cost hardware engine, and synergizes with existing hardware prefetchers that manage locality at a finer granularity. The runtime system that drives the prefetch engine dynamically selects which cache to prefetch to. Our evaluation on a set of scientific benchmarks obtains a maximum speed up of 32 and 10 % on average compared to a baseline with hardware prefetching only. As a result, we also achieve a reduction of up to 18 and 3 % on average in energy-to-solution.Peer ReviewedPostprint (author's final draft

Design and Performance of Scalable High-Performance Programmable Routers - Doctoral Dissertation, August 2002

The flexibility to adapt to new services and protocols without changes in the underlying hardware is and will increasingly be a key requirement for advanced networks. Introducing a processing component into the data path of routers and implementing packet processing in software provides this ability. In such a programmable router, a powerful processing infrastructure is necessary to achieve to level of performance that is comparable to custom silicon-based routers and to demonstrate the feasibility of this approach. This work aims at the general design of such programmable routers and, specifically, at the design and performance analysis of the processing subsystem. The necessity of programmable routers is motivated, and a router design is proposed. Based on the design, a general performance model is developed and quantitatively evaluated using a new network processor benchmark. Operational challenges, like scheduling of packets to processing engines, are addressed, and novel algorithms are presented. The results of this work give qualitative and quantitative insights into this new domain that combines issues from networking, computer architecture, and system design

Semantic Caching Framework: An FPGA-Based Application for IoT Security Monitoring

Security monitoring is one subdomain of cybersecurity which aims to guarantee the safety of systems, continuously monitoring unusual events. The development of Internet Of Things leads to huge amounts of information, being heterogeneous and requiring to be efficiently managed. Cloud Computing provides software and hardware resources for large scale data management. However, performances for sequences of on-line queries on long term historical data may be not compatible with the emergency security monitoring. This work aims to address this problem by proposing a semantic caching framework and its application to acceleration hardware with FPGA for fast- and accurate-enough logs processing for various data stores and execution engines

A survey and classification of software-defined storage systems

The exponential growth of digital information is imposing increasing scale and efficiency demands on modern storage infrastructures. As infrastructure complexity increases, so does the difficulty in ensuring quality of service, maintainability, and resource fairness, raising unprecedented performance, scalability, and programmability challenges. Software-Defined Storage (SDS) addresses these challenges by cleanly disentangling control and data flows, easing management, and improving control functionality of conventional storage systems. Despite its momentum in the research community, many aspects of the paradigm are still unclear, undefined, and unexplored, leading to misunderstandings that hamper the research and development of novel SDS technologies. In this article, we present an in-depth study of SDS systems, providing a thorough description and categorization of each plane of functionality. Further, we propose a taxonomy and classification of existing SDS solutions according to different criteria. Finally, we provide key insights about the paradigm and discuss potential future research directions for the field.This work was financed by the Portuguese funding agency FCT-Fundacao para a Ciencia e a Tecnologia through national funds, the PhD grant SFRH/BD/146059/2019, the project ThreatAdapt (FCT-FNR/0002/2018), the LASIGE Research Unit (UIDB/00408/2020), and cofunded by the FEDER, where applicable

Separation logic for high-level synthesis

High-level synthesis (HLS) promises a significant shortening of the digital hardware design cycle by raising the abstraction level of the design entry to high-level languages such as C/C++. However, applications using dynamic, pointer-based data structures remain difficult to implement well, yet such constructs are widely used in software. Automated optimisations that leverage the memory bandwidth of dedicated hardware implementations by distributing the application data over separate on-chip memories and parallelise the implementation are often ineffective in the presence of dynamic data structures, due to the lack of an automated analysis that disambiguates pointer-based memory accesses. This thesis takes a step towards closing this gap. We explore recent advances in separation logic, a rigorous mathematical framework that enables formal reasoning about the memory access of heap-manipulating programs. We develop a static analysis that automatically splits heap-allocated data structures into provably disjoint regions. Our algorithm focuses on dynamic data structures accessed in loops and is accompanied by automated source-to-source transformations which enable loop parallelisation and physical memory partitioning by off-the-shelf HLS tools. We then extend the scope of our technique to pointer-based memory-intensive implementations that require access to an off-chip memory. The extended HLS design aid generates parallel on-chip multi-cache architectures. It uses the disjointness property of memory accesses to support non-overlapping memory regions by private caches. It also identifies regions which are shared after parallelisation and which are supported by parallel caches with a coherency mechanism and synchronisation, resulting in automatically specialised memory systems. We show up to 15x acceleration from heap partitioning, parallelisation and the insertion of the custom cache system in demonstrably practical applications.Open Acces

Database System Acceleration on FPGAs

Relational database systems provide various services and applications with an efficient means for storing, processing, and retrieving their data. The performance of these systems has a direct impact on the quality of service of the applications that rely on them. Therefore, it is crucial that database systems are able to adapt and grow in tandem with the demands of these applications, ensuring that their performance scales accordingly. In the past, Moore's law and algorithmic advancements have been sufficient to meet these demands. However, with the slowdown of Moore's law, researchers have begun exploring alternative methods, such as application-specific technologies, to satisfy the more challenging performance requirements. One such technology is field-programmable gate arrays (FPGAs), which provide ideal platforms for developing and running custom architectures for accelerating database systems. The goal of this thesis is to develop a domain-specific architecture that can enhance the performance of in-memory database systems when executing analytical queries. Our research is guided by a combination of academic and industrial requirements that seek to strike a balance between generality and performance. The former ensures that our platform can be used to process a diverse range of workloads, while the latter makes it an attractive solution for high-performance use cases. Throughout this thesis, we present the development of a system-on-chip for database system acceleration that meets our requirements. The resulting architecture, called CbMSMK, is capable of processing the projection, sort, aggregation, and equi-join database operators and can also run some complex TPC-H queries. CbMSMK employs a shared sort-merge pipeline for executing all these operators, which results in an efficient use of FPGA resources. This approach enables the instantiation of multiple acceleration cores on the FPGA, allowing it to serve multiple clients simultaneously. CbMSMK can process both arbitrarily deep and wide tables efficiently. The former is achieved through the use of the sort-merge algorithm which utilizes the FPGA RAM for buffering intermediate sort results. The latter is achieved through the use of KeRRaS, a novel variant of the forward radix sort algorithm introduced in this thesis. KeRRaS allows CbMSMK to process a table a few columns at a time, incrementally generating the final result through multiple iterations. Given that acceleration is a key objective of our work, CbMSMK benefits from many performance optimizations. For instance, multi-way merging is employed to reduce the number of merge passes required for the execution of the sort-merge algorithm, thus improving the performance of all our pipeline-breaking operators. Another example is our in-depth analysis of early aggregation, which led to the development of a novel cache-based algorithm that significantly enhances aggregation performance. Our experiments demonstrate that CbMSMK performs on average 5 times faster than the state-of-the-art CPU-based database management system MonetDB.:I Database Systems & FPGAs 1 INTRODUCTION 1.1 Databases & the Importance of Performance 1.2 Accelerators & FPGAs 1.3 Requirements 1.4 Outline & Summary of Contributions 2 BACKGROUND ON DATABASE SYSTEMS 2.1 Databases 2.1.1 Storage Model 2.1.2 Storage Medium 2.2 Database Operators 2.2.1 Projection 2.2.2 Filter 2.2.3 Sort 2.2.4 Aggregation 2.2.5 Join 2.2.6 Operator Classification 2.3 Database Queries 2.4 Impact of Acceleration 3 BACKGROUND ON FPGAS 3.1 FPGA 3.1.1 Logic Element 3.1.2 Block RAM (BRAM) 3.1.3 Digital Signal Processor (DSP) 3.1.4 IO Element 3.1.5 Programmable Interconnect 3.2 FPGADesignFlow 3.2.1 Specifications 3.2.2 RTL Description 3.2.3 Verification 3.2.4 Synthesis, Mapping, Placement, and Routing 3.2.5 TimingAnalysis 3.2.6 Bitstream Generation and FPGA Programming 3.3 Implementation Quality Metrics 3.4 FPGA Cards 3.5 Benefits of Using FPGAs 3.6 Challenges of Using FPGAs 4 RELATED WORK 4.1 Summary of Related Work 4.2 Platform Type 4.2.1 Accelerator Card 4.2.2 Coprocessor 4.2.3 Smart Storage 4.2.4 Network Processor 4.3 Implementation 4.3.1 Loop-based implementation 4.3.2 Sort-based Implementation 4.3.3 Hash-based Implementation 4.3.4 Mixed Implementation 4.4 A Note on Quantitative Performance Comparisons II Cache-Based Morphing Sort-Merge with KeRRaS (CbMSMK) 5 OBJECTIVES AND ARCHITECTURE OVERVIEW 5.1 From Requirements to Objectives 5.2 Architecture Overview 5.3 Outlineof Part II 6 COMPARATIVE ANALYSIS OF OPENCL AND RTL FOR SORT-MERGE PRIMITIVES ON FPGAS 6.1 Programming FPGAs 6.2 RelatedWork 6.3 Architecture 6.3.1 Global Architecture 6.3.2 Sorter Architecture 6.3.3 Merger Architecture 6.3.4 Scalability and Resource Adaptability 6.4 Experiments 6.4.1 OpenCL Sort-Merge Implementation 6.4.2 RTLSorters 6.4.3 RTLMergers 6.4.4 Hybrid OpenCL-RTL Sort-Merge Implementation 6.5 Summary & Discussion 7 RESOURCE-EFFICIENT ACCELERATION OF PIPELINE-BREAKING DATABASE OPERATORS ON FPGAS 7.1 The Case for Resource Efficiency 7.2 Related Work 7.3 Architecture 7.3.1 Sorters 7.3.2 Sort-Network 7.3.3 X:Y Mergers 7.3.4 Merge-Network 7.3.5 Join Materialiser (JoinMat) 7.4 Experiments 7.4.1 Experimental Setup 7.4.2 Implementation Description & Tuning 7.4.3 Sort Benchmarks 7.4.4 Aggregation Benchmarks 7.4.5 Join Benchmarks 7. Summary 8 KERRAS: COLUMN-ORIENTED WIDE TABLE PROCESSING ON FPGAS 8.1 The Scope of Database System Accelerators 8.2 Related Work 8.3 Key-Reduce Radix Sort(KeRRaS) 8.3.1 Time Complexity 8.3.2 Space Complexity (Memory Utilization) 8.3.3 Discussion and Optimizations 8.4 Architecture 8.4.1 MSM 8.4.2 MSMK: Extending MSM with KeRRaS 8.4.3 Payload, Aggregation and Join Processing 8.4.4 Limitations 8.5 Experiments 8.5.1 Experimental Setup 8.5.2 Datasets 8.5.3 MSMK vs. MSM 8.5.4 Payload-Less Benchmarks 8.5.5 Payload-Based Benchmarks 8.5.6 Flexibility 8.6 Summary 9 A STUDY OF EARLY AGGREGATION IN DATABASE QUERY PROCESSING ON FPGAS 9.1 Early Aggregation 9.2 Background & Related Work 9.2.1 Sort-Based Early Aggregation 9.2.2 Cache-Based Early Aggregation 9.3 Simulations 9.3.1 Datasets 9.3.2 Metrics 9.3.3 Sort-Based Versus Cache-Based Early Aggregation 9.3.4 Comparison of Set-Associative Caches 9.3.5 Comparison of Cache Structures 9.3.6 Comparison of Replacement Policies 9.3.7 Cache Selection Methodology 9.4 Cache System Architecture 9.4.1 Window Aggregator 9.4.2 Compressor & Hasher 9.4.3 Collision Detector 9.4.4 Collision Resolver 9.4.5 Cache 9.5 Experiments 9.5.1 Experimental Setup 9.5.2 Resource Utilization and Parameter Tuning 9.5.3 Datasets 9.5.4 Benchmarks on Synthetic Data 9.5.5 Benchmarks on Real Data 9.6 Summary 10 THE FULL PICTURE 10.1 System Architecture 10.2 Benchmarks 10.3 Meeting the Objectives III Conclusion 11 SUMMARY AND OUTLOOK ON FUTURE RESEARCH 11.1 Summary 11.2 Future Work BIBLIOGRAPHY LIST OF FIGURES LIST OF TABLE

Scalable Emulation of Heterogeneous Systems

The breakdown of Dennard's transistor scaling has driven computing systems toward application-specific accelerators, which can provide orders-of-magnitude improvements in performance and energy efficiency over general-purpose processors. To enable the radical departures from conventional approaches that heterogeneous systems entail, research infrastructure must be able to model processors, memory and accelerators, as well as system-level changes---such as operating system or instruction set architecture (ISA) innovations---that might be needed to realize the accelerators' potential. Unfortunately, existing simulation tools that can support such system-level research are limited by the lack of fast, scalable machine emulators to drive execution. To fill this need, in this dissertation we first present a novel machine emulator design based on dynamic binary translation that makes the following improvements over the state of the art: it scales on multicore hosts while remaining memory efficient, correctly handles cross-ISA differences in atomic instruction semantics, leverages the host floating point (FP) unit to speed up FP emulation without sacrificing correctness, and can be efficiently instrumented to---among other possible uses---drive the execution of a full-system, cross-ISA simulator with support for accelerators. We then demonstrate the utility of machine emulation for studying heterogeneous systems by leveraging it to make two additional contributions. First, we quantify the trade-offs in different coupling models for on-chip accelerators. Second, we present a technique to reuse the private memories of on-chip accelerators when they are otherwise inactive to expand the system's last-level cache, thereby reducing the opportunity cost of the accelerators' integration