Discriminative Marginalized Probabilistic Neural Method for Multi-Document Summarization of Medical Literature

Although current state-of-the-art Transformer-based solutions succeeded in a wide range for single-document NLP tasks, they still struggle to address multi-input tasks such as multi-document summarization. Many solutions truncate the inputs, thus ignoring potential summary-relevant contents, which is unacceptable in the medical domain where each information can be vital. Others leverage linear model approximations to apply multi-input concatenation, worsening the results because all information is considered, even if it is conflicting or noisy with respect to a shared background. Despite the importance and social impact of medicine, there are no ad-hoc solutions for multi-document summarization. For this reason, we propose a novel discriminative marginalized probabilistic method (DAMEN) trained to discriminate critical information from a cluster of topic-related medical documents and generate a multi-document summary via token probability marginalization. Results prove we outperform the previous state-of-the-art on a biomedical dataset for multi-document summarization of systematic literature reviews. Moreover, we perform extensive ablation studies to motivate the design choices and prove the importance of each module of our method

Geometric data understanding : deriving case specific features

There exists a tradition using precise geometric modeling, where uncertainties in data can be considered noise. Another tradition relies on statistical nature of vast quantity of data, where geometric regularity is intrinsic to data and statistical models usually grasp this level only indirectly. This work focuses on point cloud data of natural resources and the silhouette recognition from video input as two real world examples of problems having geometric content which is intangible at the raw data presentation. This content could be discovered and modeled to some degree by such machine learning (ML) approaches like deep learning, but either a direct coverage of geometry in samples or addition of special geometry invariant layer is necessary. Geometric content is central when there is a need for direct observations of spatial variables, or one needs to gain a mapping to a geometrically consistent data representation, where e.g. outliers or noise can be easily discerned. In this thesis we consider transformation of original input data to a geometric feature space in two example problems. The first example is curvature of surfaces, which has met renewed interest since the introduction of ubiquitous point cloud data and the maturation of the discrete differential geometry. Curvature spectra can characterize a spatial sample rather well, and provide useful features for ML purposes. The second example involves projective methods used to video stereo-signal analysis in swimming analytics. The aim is to find meaningful local geometric representations for feature generation, which also facilitate additional analysis based on geometric understanding of the model. The features are associated directly to some geometric quantity, and this makes it easier to express the geometric constraints in a natural way, as shown in the thesis. Also, the visualization and further feature generation is much easier. Third, the approach provides sound baseline methods to more traditional ML approaches, e.g. neural network methods. Fourth, most of the ML methods can utilize the geometric features presented in this work as additional features.Geometriassa käytetään perinteisesti tarkkoja malleja, jolloin datassa esiintyvät epätarkkuudet edustavat melua. Toisessa perinteessä nojataan suuren datamäärän tilastolliseen luonteeseen, jolloin geometrinen säännönmukaisuus on datan sisäsyntyinen ominaisuus, joka hahmotetaan tilastollisilla malleilla ainoastaan epäsuorasti. Tämä työ keskittyy kahteen esimerkkiin: luonnonvaroja kuvaaviin pistepilviin ja videohahmontunnistukseen. Nämä ovat todellisia ongelmia, joissa geometrinen sisältö on tavoittamattomissa raakadatan tasolla. Tämä sisältö voitaisiin jossain määrin löytää ja mallintaa koneoppimisen keinoin, esim. syväoppimisen avulla, mutta joko geometria pitää kattaa suoraan näytteistämällä tai tarvitaan neuronien lisäkerros geometrisia invariansseja varten. Geometrinen sisältö on keskeinen, kun tarvitaan suoraa avaruudellisten suureiden havainnointia, tai kun tarvitaan kuvaus geometrisesti yhtenäiseen dataesitykseen, jossa poikkeavat näytteet tai melu voidaan helposti erottaa. Tässä työssä tarkastellaan datan muuntamista geometriseen piirreavaruuteen kahden esimerkkiohjelman suhteen. Ensimmäinen esimerkki on pintakaarevuus, joka on uudelleen virinneen kiinnostuksen kohde kaikkialle saatavissa olevan datan ja diskreetin geometrian kypsymisen takia. Kaarevuusspektrit voivat luonnehtia avaruudellista kohdetta melko hyvin ja tarjota koneoppimisessa hyödyllisiä piirteitä. Toinen esimerkki koskee projektiivisia menetelmiä käytettäessä stereovideosignaalia uinnin analytiikkaan. Tavoite on löytää merkityksellisiä paikallisen geometrian esityksiä, jotka samalla mahdollistavat muun geometrian ymmärrykseen perustuvan analyysin. Piirteet liittyvät suoraan johonkin geometriseen suureeseen, ja tämä helpottaa luonnollisella tavalla geometristen rajoitteiden käsittelyä, kuten väitöstyössä osoitetaan. Myös visualisointi ja lisäpiirteiden luonti muuttuu helpommaksi. Kolmanneksi, lähestymistapa suo selkeän vertailumenetelmän perinteisemmille koneoppimisen lähestymistavoille, esim. hermoverkkomenetelmille. Neljänneksi, useimmat koneoppimismenetelmät voivat hyödyntää tässä työssä esitettyjä geometrisia piirteitä lisäämällä ne muiden piirteiden joukkoon

Fusion features ensembling models using Siamese convolutional neural network for kinship verification

Family is one of the most important entities in the community. Mining the genetic information through facial images is increasingly being utilized in wide range of real-world applications to facilitate family members tracing and kinship analysis to become remarkably easy, inexpensive, and fast as compared to the procedure of profiling Deoxyribonucleic acid (DNA). However, the opportunities of building reliable models for kinship recognition are still suffering from the insufficient determination of the familial features, unstable reference cues of kinship, and the genetic influence factors of family features. This research proposes enhanced methods for extracting and selecting the effective familial features that could provide evidences of kinship leading to improve the kinship verification accuracy through visual facial images. First, the Convolutional Neural Network based on Optimized Local Raw Pixels Similarity Representation (OLRPSR) method is developed to improve the accuracy performance by generating a new matrix representation in order to remove irrelevant information. Second, the Siamese Convolutional Neural Network and Fusion of the Best Overlapping Blocks (SCNN-FBOB) is proposed to track and identify the most informative kinship clues features in order to achieve higher accuracy. Third, the Siamese Convolutional Neural Network and Ensembling Models Based on Selecting Best Combination (SCNN-EMSBC) is introduced to overcome the weak performance of the individual image and classifier. To evaluate the performance of the proposed methods, series of experiments are conducted using two popular benchmarking kinship databases; the KinFaceW-I and KinFaceW-II which then are benchmarked against the state-of-art algorithms found in the literature. It is indicated that SCNN-EMSBC method achieves promising results with the average accuracy of 92.42% and 94.80% on KinFaceW-I and KinFaceW-II, respectively. These results significantly improve the kinship verification performance and has outperformed the state-of-art algorithms for visual image-based kinship verification

Smart Sensors for Healthcare and Medical Applications

This book focuses on new sensing technologies, measurement techniques, and their applications in medicine and healthcare. Specifically, the book briefly describes the potential of smart sensors in the aforementioned applications, collecting 24 articles selected and published in the Special Issue “Smart Sensors for Healthcare and Medical Applications”. We proposed this topic, being aware of the pivotal role that smart sensors can play in the improvement of healthcare services in both acute and chronic conditions as well as in prevention for a healthy life and active aging. The articles selected in this book cover a variety of topics related to the design, validation, and application of smart sensors to healthcare

Remote Sensing Applications in Coastal Environment

Coastal regions are susceptible to rapid changes, as they constitute the boundary between the land and the sea. The resilience of a particular segment of coast depends on many factors, including climate change, sea-level changes, natural and technological hazards, extraction of natural resources, population growth, and tourism. Recent research highlights the strong capabilities for remote sensing applications to monitor, inventory, and analyze the coastal environment. This book contains 12 high-quality and innovative scientific papers that explore, evaluate, and implement the use of remote sensing sensors within both natural and built coastal environments

Social, Private, and Trusted Wearable Technology under Cloud-Aided Intermittent Wireless Connectivity

There has been an unprecedented increase in the use of smart devices globally, together with novel forms of communication, computing, and control technologies that have paved the way for a new category of devices, known as high-end wearables. While massive deployments of these objects may improve the lives of people, unauthorized access to the said private equipment and its connectivity is potentially dangerous. Hence, communication enablers together with highly-secure human authentication mechanisms have to be designed.In addition, it is important to understand how human beings, as the primary users, interact with wearable devices on a day-to-day basis; usage should be comfortable, seamless, user-friendly, and mindful of urban dynamics. Usually the connectivity between wearables and the cloud is executed through the user’s more power independent gateway: this will usually be a smartphone, which may have potentially unreliable infrastructure connectivity. In response to these unique challenges, this thesis advocates for the adoption of direct, secure, proximity-based communication enablers enhanced with multi-factor authentication (hereafter refereed to MFA) that can integrate/interact with wearable technology. Their intelligent combination together with the connection establishment automation relying on the device/user social relations would allow to reliably grant or deny access in cases of both stable and intermittent connectivity to the trusted authority running in the cloud.The introduction will list the main communication paradigms, applications, conventional network architectures, and any relevant wearable-specific challenges. Next, the work examines the improved architecture and security enablers for clusterization between wearable gateways with a proximity-based communication as a baseline. Relying on this architecture, the author then elaborates on the social ties potentially overlaying the direct connectivity management in cases of both reliable and unreliable connection to the trusted cloud. The author discusses that social-aware cooperation and trust relations between users and/or the devices themselves are beneficial for the architecture under proposal. Next, the author introduces a protocol suite that enables temporary delegation of personal device use dependent on different connectivity conditions to the cloud.After these discussions, the wearable technology is analyzed as a biometric and behavior data provider for enabling MFA. The conventional approaches of the authentication factor combination strategies are compared with the ‘intelligent’ method proposed further. The assessment finds significant advantages to the developed solution over existing ones.On the practical side, the performance evaluation of existing cryptographic primitives, as part of the experimental work, shows the possibility of developing the experimental methods further on modern wearable devices.In summary, the set of enablers developed here for wearable technology connectivity is aimed at enriching people’s everyday lives in a secure and usable way, in cases when communication to the cloud is not consistently available

Nonparametric Bayesian methods in robotic vision

In this dissertation non-parametric Bayesian methods are used in the application of robotic vision. Robots make use of depth sensors that represent their environment using point clouds. Non-parametric Bayesian methods can (1) determine how good an object is recognized, and (2) determine how many objects a particular scene contains. When there is a model available for the object to be recognized and the nature of perceptual error is known, a Bayesian method will act optimally.In this dissertation Bayesian models are developed to represent geometric objects such as lines and line segments (consisting out of points). The infinite line model and the infinite line segment model use a non-parametric Bayesian model, to be precise, a Dirichlet process, to represent the number of objects. The line or the line segment is represented by a probability distribution. The lines can be represented by conjugate distributions and then Gibbs sampling can be used. The line segments are not represented by conjugate distributions and therefore a split-merge sampler is used.A split-merge sampler fits line segments by assigning points to a hypothetical line segment. Then it proposes splits of a single line segment or merges of two line segments. A new sampler, the triadic split-merge sampler, introduces steps that involve three line segments. In this dissertation, the new sampler is compared to a conventional split-merge sampler. The triadic sampler can be applied to other problems as well, i.e., not only problems in robotic perception.The models for objects can also be learned. In the dissertation this is done for more complex objects, such as cubes, built up out of hundreds of points. An auto-encoder then learns to generate a representative object given the data. The auto-encoder uses a newly defined reconstruction distance, called the partitioning earth mover’s distance. The object that is learned by the auto-encoder is used in a triadic sampler to (1) identify the point cloud objects and to (2) establish multiple occurrences of those objects in the point cloud.Algorithms and the Foundations of Software technolog