The impact of MEG source reconstruction method on source-space connectivity estimation: A comparison between minimum-norm solution and beamforming.

Despite numerous important contributions, the investigation of brain connectivity with magnetoencephalography (MEG) still faces multiple challenges. One critical aspect of source-level connectivity, largely overlooked in the literature, is the putative effect of the choice of the inverse method on the subsequent cortico-cortical coupling analysis. We set out to investigate the impact of three inverse methods on source coherence detection using simulated MEG data. To this end, thousands of randomly located pairs of sources were created. Several parameters were manipulated, including inter- and intra-source correlation strength, source size and spatial configuration. The simulated pairs of sources were then used to generate sensor-level MEG measurements at varying signal-to-noise ratios (SNR). Next, the source level power and coherence maps were calculated using three methods (a) L2-Minimum-Norm Estimate (MNE), (b) Linearly Constrained Minimum Variance (LCMV) beamforming, and (c) Dynamic Imaging of Coherent Sources (DICS) beamforming. The performances of the methods were evaluated using Receiver Operating Characteristic (ROC) curves. The results indicate that beamformers perform better than MNE for coherence reconstructions if the interacting cortical sources consist of point-like sources. On the other hand, MNE provides better connectivity estimation than beamformers, if the interacting sources are simulated as extended cortical patches, where each patch consists of dipoles with identical time series (high intra-patch coherence). However, the performance of the beamformers for interacting patches improves substantially if each patch of active cortex is simulated with only partly coherent time series (partial intra-patch coherence). These results demonstrate that the choice of the inverse method impacts the results of MEG source-space coherence analysis, and that the optimal choice of the inverse solution depends on the spatial and synchronization profile of the interacting cortical sources. The insights revealed here can guide method selection and help improve data interpretation regarding MEG connectivity estimation

A Beamformer-Particle Filter Framework for Localization of Correlated EEG Sources

Abstract—Electroencephalography (EEG)-based brain computer interface (BCI) is the most studied non-invasive interface to build a direct communication pathway between the brain and an external device. However, correlated noises in EEG measurements still constitute a significant challenge. Alternatively, building BCIs based on filtered brain activity source signals instead of using their surface projections, obtained from the noisy EEG signals, is a promising and not well explored direction. In this context, finding the locations and waveforms of inner brain sources represents a crucial task for advancing source-based non-invasive BCI technologies. In this paper, we propose a novel Multi-core Beamformer Particle Filter (Multi-core BPF) to estimate the EEG brain source spatial locations and their corresponding waveforms. In contrast to conventional (single-core) Beamforming spatial filters, the developed Multi-core BPF considers explicitly temporal correlation among the estimated brain sources by suppressing activation from regions with interfering coherent sources. The hybrid Multi-core BPF brings together the advantages of both deterministic and Bayesian inverse problem algorithms in order to improve the estimation accuracy. It solves the brain activity localization problem without prior information about approximate areas of source locations. Moreover, the multi-core BPF reduces the dimensionality of the problem to half compared with the PF solution; thus alleviating the curse of dimensionality problem. The results, based on generated and real EEG data, show that the proposed framework recovers correctly the dominant sources of brain activity

Dynamic filtering of static dipoles in magnetoencephalography

We consider the problem of estimating neural activity from measurements of the magnetic fields recorded by magnetoencephalography. We exploit the temporal structure of the problem and model the neural current as a collection of evolving current dipoles, which appear and disappear, but whose locations are constant throughout their lifetime. This fully reflects the physiological interpretation of the model. In order to conduct inference under this proposed model, it was necessary to develop an algorithm based around state-of-the-art sequential Monte Carlo methods employing carefully designed importance distributions. Previous work employed a bootstrap filter and an artificial dynamic structure where dipoles performed a random walk in space, yielding nonphysical artefacts in the reconstructions; such artefacts are not observed when using the proposed model. The algorithm is validated with simulated data, in which it provided an average localisation error which is approximately half that of the bootstrap filter. An application to complex real data derived from a somatosensory experiment is presented. Assessment of model fit via marginal likelihood showed a clear preference for the proposed model and the associated reconstructions show better localisation

ERP source tracking and localization from single trial EEG MEG signals

Electroencephalography (EEG) and magnetoencephalography (MEG), which are two of a number of neuroimaging techniques, are scalp recordings of the electrical activity of the brain. EEG and MEG (E/MEG) have excellent temporal resolution, they are easy to acquire, and have a wide range of applications in science, medicine and engineering. These valuable signals, however, suffer from poor spatial resolution and in many cases from very low signal to noise ratios. In this study, new computational methods for analyzing and improving the quality of E/MEG signals are presented. We mainly focus on single trial event-related potential (ERP) estimation and E/MEG dipole source localization. Several methods basically based on particle filtering (PF) are proposed. First, a method using PF for single trial estimation of ERP signals is considered. In this method, the wavelet coefficients of each ERP are assumed to be a Markovian process and do not change extensively across trials. The wavelet coefficients are then estimated recursively using PF. The results both for simulations and real data are compared with those of the well known Kalman Filtering (KF) approach. In the next method we move from single trial estimation to source localization of E/MEG signals. The beamforming (BF) approach for dipole source localization is generalized based on prior information about the noise. BF is in fact a spatial filter that minimizes the power of all the signals at the output of the filter except those that come from the locations of interest. In the proposed method, using two more constraints than in the classical BF formulation, the output noise powers are minimized and the interference activities are stopped.EThOS - Electronic Theses Online ServiceGBUnited Kingdo

Roadmap on signal processing for next generation measurement systems

Signal processing is a fundamental component of almost any sensor-enabled system, with a wide range of applications across different scientific disciplines. Time series data, images, and video sequences comprise representative forms of signals that can be enhanced and analysed for information extraction and quantification. The recent advances in artificial intelligence and machine learning are shifting the research attention towards intelligent, data-driven, signal processing. This roadmap presents a critical overview of the state-of-the-art methods and applications aiming to highlight future challenges and research opportunities towards next generation measurement systems. It covers a broad spectrum of topics ranging from basic to industrial research, organized in concise thematic sections that reflect the trends and the impacts of current and future developments per research field. Furthermore, it offers guidance to researchers and funding agencies in identifying new prospects.AerodynamicsMicrowave Sensing, Signals & System

Magnetoencephalography

This is a practical book on MEG that covers a wide range of topics. The book begins with a series of reviews on the use of MEG for clinical applications, the study of cognitive functions in various diseases, and one chapter focusing specifically on studies of memory with MEG. There are sections with chapters that describe source localization issues, the use of beamformers and dipole source methods, as well as phase-based analyses, and a step-by-step guide to using dipoles for epilepsy spike analyses. The book ends with a section describing new innovations in MEG systems, namely an on-line real-time MEG data acquisition system, novel applications for MEG research, and a proposal for a helium re-circulation system. With such breadth of topics, there will be a chapter that is of interest to every MEG researcher or clinician

ERP source tracking and localization from single trial EEG MEG signals

Electroencephalography (EEG) and magnetoencephalography (MEG), which are two of a number of neuroimaging techniques, are scalp recordings of the electrical activity of the brain. EEG and MEG (E/MEG) have excellent temporal resolution, they are easy to acquire, and have a wide range of applications in science, medicine and engineering. These valuable signals, however, suffer from poor spatial resolution and in many cases from very low signal to noise ratios. In this study, new computational methods for analyzing and improving the quality of E/MEG signals are presented. We mainly focus on single trial event-related potential (ERP) estimation and E/MEG dipole source localization. Several methods basically based on particle filtering (PF) are proposed. First, a method using PF for single trial estimation of ERP signals is considered. In this method, the wavelet coefficients of each ERP are assumed to be a Markovian process and do not change extensively across trials. The wavelet coefficients are then estimated recursively using PF. The results both for simulations and real data are compared with those of the well known Kalman Filtering (KF) approach. In the next method we move from single trial estimation to source localization of E/MEG signals. The beamforming (BF) approach for dipole source localization is generalized based on prior information about the noise. BF is in fact a spatial filter that minimizes the power of all the signals at the output of the filter except those that come from the locations of interest. In the proposed method, using two more constraints than in the classical BF formulation, the output noise powers are minimized and the interference activities are stopped

Video-aided model-based source separation in real reverberant rooms

Source separation algorithms that utilize only audio data can perform poorly if multiple sources or reverberation are present. In this paper we therefore propose a video-aided model-based source separation algorithm for a two-channel reverberant recording in which the sources are assumed static. By exploiting cues from video, we first localize individual speech sources in the enclosure and then estimate their directions. The interaural spatial cues, the interaural phase difference and the interaural level difference, as well as the mixing vectors are probabilistically modeled. The models make use of the source direction information and are evaluated at discrete timefrequency points. The model parameters are refined with the wellknown expectation-maximization (EM) algorithm. The algorithm outputs time-frequency masks that are used to reconstruct the individual sources. Simulation results show that by utilizing the visual modality the proposed algorithm can produce better timefrequency masks thereby giving improved source estimates. We provide experimental results to test the proposed algorithm in different scenarios and provide comparisons with both other audio-only and audio-visual algorithms and achieve improved performance both on synthetic and real data. We also include dereverberation based pre-processing in our algorithm in order to suppress the late reverberant components from the observed stereo mixture and further enhance the overall output of the algorithm. This advantage makes our algorithm a suitable candidate for use in under-determined highly reverberant settings where the performance of other audio-only and audio-visual methods is limited