Many-core compiler fuzzing

We address the compiler correctness problem for many-core systems through novel applications of fuzz testing to OpenCL compilers. Focusing on two methods from prior work, random differential testing and testing via equivalence modulo inputs (EMI), we present several strategies for random generation of deterministic, communicating OpenCL kernels, and an injection mechanism that allows EMI testing to be applied to kernels that otherwise exhibit little or no dynamically-dead code. We use these methods to conduct a large, controlled testing campaign with respect to 21 OpenCL (device, compiler) configurations, covering a range of CPU, GPU, accelerator, FPGA and emulator implementations. Our study provides independent validation of claims in prior work related to the effectiveness of random differential testing and EMI testing, proposes novel methods for lifting these techniques to the many-core setting and reveals a significant number of OpenCL compiler bugs in commercial implementations

Data Parallel C++

Learn how to accelerate C++ programs using data parallelism. This open access book enables C++ programmers to be at the forefront of this exciting and important new development that is helping to push computing to new levels. It is full of practical advice, detailed explanations, and code examples to illustrate key topics. Data parallelism in C++ enables access to parallel resources in a modern heterogeneous system, freeing you from being locked into any particular computing device. Now a single C++ application can use any combination of devices—including GPUs, CPUs, FPGAs and AI ASICs—that are suitable to the problems at hand. This book begins by introducing data parallelism and foundational topics for effective use of the SYCL standard from the Khronos Group and Data Parallel C++ (DPC++), the open source compiler used in this book. Later chapters cover advanced topics including error handling, hardware-specific programming, communication and synchronization, and memory model considerations. Data Parallel C++ provides you with everything needed to use SYCL for programming heterogeneous systems. What You'll Learn Accelerate C++ programs using data-parallel programming Target multiple device types (e.g. CPU, GPU, FPGA) Use SYCL and SYCL compilers Connect with computing’s heterogeneous future via Intel’s oneAPI initiative Who This Book Is For Those new data-parallel programming and computer programmers interested in data-parallel programming using C++

Worst-Case Execution Time Guarantees for Runtime-Reconfigurable Architectures

Real-time systems are ubiquitous in our everyday life, e.g., in safety-critical domains such as automotive, avionics or robotics. The correctness of a real-time system does not only depend on the correctness of its calculations, but also on the non-functional requirement of adhering to deadlines. Failing to meet a deadline may lead to severe malfunctions, therefore worst-case execution times (WCET) need to be guaranteed. Despite significant scientific advances, however, timing analysis of WCET guarantees lags years behind current high-performance microarchitectures with out-of-order scheduling pipelines, several hardware threads and multiple (shared) cache layers. To satisfy the increasing performance demands of real-time systems, analyzable performance features are required. In order to escape the scarcity of timing-analyzable performance features, the main contribution of this thesis is the introduction of runtime reconfiguration of hardware accelerators onto a field-programmable gate array (FPGA) as a novel means to achieve performance that is amenable to WCET guarantees. Instead of designing an architecture for a specific application domain, this approach preserves the flexibility of the system. First, this thesis contributes novel co-scheduling approaches to distribute work among CPU and GPU in an extensive analysis of how (average-case) performance is achieved on fused CPU-GPU architectures, a main trend in current high-performance microarchitectures that combines a CPU and a GPU on a single chip. Being able to employ such architectures in real-time systems would be highly desirable, because they provide high performance within a limited area and power budget. As a result of this analysis, however, a cache coherency bottleneck is uncovered in recent fused CPU-GPU architectures that share the last level cache between CPU and GPU. This insight (i) complicates performance predictions and (ii) adds a shared last level cache between CPU and GPU to the growing list of microarchitectural features that benefit average-case performance, but render the analysis of WCET guarantees on high-performance architectures virtually infeasible. Thus, further motivating the need for novel microarchitectural features that provide predictable performance and are amenable to timing analysis. Towards this end, a runtime reconfiguration controller called ``Command-based Reconfiguration Queue\u27\u27 (CoRQ) is presented that provides guaranteed latencies for its operations, especially for the reconfiguration delay, i.e., the time it takes to reconfigure a hardware accelerator onto a reconfigurable fabric (e.g., FPGA). CoRQ enables the design of timing-analyzable runtime-reconfigurable architectures that support WCET guarantees. Based on the --now feasible-- guaranteed reconfiguration delay of accelerators, a WCET analysis is introduced that enables tasks to reconfigure application-specific custom instructions (CIs) at runtime. CIs are executed by a processor pipeline and invoke execution of one or more accelerators. Different measures to deal with reconfiguration delays are compared for their impact on accelerated WCET guarantees and overestimation. The timing anomaly of runtime reconfiguration is identified and safely bounded: a case where executing iterations of a computational kernel faster than in WCET during reconfiguration of CIs can prolong the total execution time of a task. Once tasks that perform runtime reconfiguration of CIs can be analyzed for WCET guarantees, the question of which CIs to configure on a constrained reconfigurable area to optimize the WCET is raised. The question is addressed for systems where multiple CIs with different implementations each (allowing to trade-off latency and area requirements) can be selected. This is generally the case, e.g., when employing high-level synthesis. This so-called WCET-optimizing instruction set selection problem is modeled based on the Implicit Path Enumeration Technique (IPET), which is the path analysis technique state-of-the-art timing analyzers rely on. To our knowledge, this is the first approach that enables WCET optimization with support for making use of global program flow information (and information about reconfiguration delay). An optimal algorithm (similar to Branch and Bound) and a fast greedy heuristic algorithm (that achieves the optimal solution in most cases) are presented. Finally, an approach is presented that, for the first time, combines optimized static WCET guarantees and runtime optimization of the average-case execution (maintaining WCET guarantees) using runtime reconfiguration of hardware accelerators by leveraging runtime slack (the amount of time that program parts are executed faster than in WCET). It comprises an analysis of runtime slack bounds that enable safe reconfiguration for average-case performance under WCET guarantees and presents a mechanism to monitor runtime slack using a simple performance counter that is commonly available in many microprocessors. Ultimately, this thesis shows that runtime reconfiguration of accelerators is a key feature to achieve predictable performance

Data Parallel C++

Learn how to accelerate C++ programs using data parallelism. This open access book enables C++ programmers to be at the forefront of this exciting and important new development that is helping to push computing to new levels. It is full of practical advice, detailed explanations, and code examples to illustrate key topics. Data parallelism in C++ enables access to parallel resources in a modern heterogeneous system, freeing you from being locked into any particular computing device. Now a single C++ application can use any combination of devices—including GPUs, CPUs, FPGAs and AI ASICs—that are suitable to the problems at hand. This book begins by introducing data parallelism and foundational topics for effective use of the SYCL standard from the Khronos Group and Data Parallel C++ (DPC++), the open source compiler used in this book. Later chapters cover advanced topics including error handling, hardware-specific programming, communication and synchronization, and memory model considerations. Data Parallel C++ provides you with everything needed to use SYCL for programming heterogeneous systems. What You'll Learn Accelerate C++ programs using data-parallel programming Target multiple device types (e.g. CPU, GPU, FPGA) Use SYCL and SYCL compilers Connect with computing’s heterogeneous future via Intel’s oneAPI initiative Who This Book Is For Those new data-parallel programming and computer programmers interested in data-parallel programming using C++

FPGA Accelerators on Heterogeneous Systems: An Approach Using High Level Synthesis

La evolución de las FPGAs como dispositivos para el procesamiento con alta eficiencia energética y baja latencia de control, comparada con dispositivos como las CPUs y las GPUs, las han hecho atractivas en el ámbito de la computación de alto rendimiento (HPC).A pesar de las inumerables ventajas de las FPGAs, su inclusión en HPC presenta varios retos. El primero, la complejidad que supone la programación de las FPGAs comparada con dispositivos como las CPUs y las GPUs. Segundo, el tiempo de desarrollo es alto debido al proceso de síntesis del hardware. Y tercero, trabajar con más arquitecturas en HPC requiere el manejo y la sintonización de los detalles de cada dispositivo, lo que añade complejidad.Esta tesis aborda estos 3 problemas en diferentes niveles con el objetivo de mejorar y facilitar la adopción de las FPGAs usando la síntesis de alto nivel(HLS) en sistemas HPC.En un nivel próximo al hardware, en esta tesis se desarrolla un modelo analítico para las aplicaciones limitadas en memoria, que es una situación común en aplicaciones de HPC. El modelo, desarrollado para kernels programados usando HLS, puede predecir el tiempo de ejecución con alta precisión y buena adaptabilidad ante cambios en la tecnología de la memoria, como las DDR4 y HBM2, y en las variaciones en la frecuencia del kernel. Esta solución puede aumentar potencialmente la productividad de las personas que programan, reduciendo el tiempo de desarrollo y optimización de las aplicaciones.Entender los detalles de bajo nivel puede ser complejo para las programadoras promedio, y el desempeño de las aplicaciones para FPGA aún requiere un alto nivel en las habilidades de programación. Por ello, nuestra segunda propuesta está enfocada en la extensión de las bibliotecas con una propuesta para cómputo en visión artificial que sea portable entre diferentes fabricantes de FPGAs. La biblioteca se ha diseñado basada en templates, lo que permite una biblioteca que da flexibilidad a la generación del hardware y oculta decisiones de diseño críticas como la comunicación entre nodos, el modelo de concurrencia, y la integración de las aplicaciones en el sistema heterogéneo para facilitar el desarrollo de grafos de visión artificial que pueden ser complejos.Finalmente, en el runtime del host del sistema heterogéneo, hemos integrado la FPGA para usarla de forma trasparente como un dispositivo acelerador para la co-ejecución en sistemas heterogéneos. Hemos hecho una serie propuestas de altonivel de abstracción que abarca los mecanismos de sincronización y políticas de balanceo en un sistema altamente heterogéneo compuesto por una CPU, una GPU y una FPGA. Se presentan los principales retos que han inspirado esta investigación y los beneficios de la inclusión de una FPGA en rendimiento y energía.En conclusión, esta tesis contribuye a la adopción de las FPGAs para entornos HPC, aportando soluciones que ayudan a reducir el tiempo de desarrollo y mejoran el desempeño y la eficiencia energética del sistema.---------------------------------------------The emergence of FPGAs in the High-Performance Computing domain is arising thanks to their promise of better energy efficiency and low control latency, compared with other devices such as CPUs or GPUs.Albeit these benefits, their complete inclusion into HPC systems still faces several challenges. First, FPGA complexity means its programming more difficult compared to devices such as CPU and GPU. Second, the development time is longer due to the required synthesis effort. And third, working with multiple devices increments the details that should be managed and increase hardware complexity.This thesis tackles these 3 problems at different stack levels to improve and to make easier the adoption of FPGAs using High-Level Synthesis on HPC systems. At a close to the hardware level, this thesis contributes with a new analytical model for memory-bound applications, an usual situation for HPC applications. The model for HLS kernels can anticipate application performance before place and route, reducing the design development time. Our results show a high precision and adaptable model for external memory technologies such as DDR4 and HBM2, and kernel frequency changes. This solution potentially increases productivity, reducing application development time.Understanding low-level implementation details is difficult for average programmers, and the development of FPGA applications still requires high proficiency program- ming skills. For this reason, the second proposal is focused on the extension of a computer vision library to be portable among two of the main FPGA vendors. The template-based library allows hardware flexibility and hides design decisions such as the communication among nodes, the concurrency programming model, and the application’s integration in the heterogeneous system, to develop complex vision graphs easily.Finally, we have transparently integrated the FPGA in a high level framework for co-execution with other devices. We propose a set of high level abstractions covering synchronization mechanism and load balancing policies in a highly heterogeneous system with CPU, GPU, and FPGA devices. We present the main challenges that inspired this research and the benefits of the FPGA use demonstrating performance and energy improvements.<br /

Considerations in using OpenCL on GPUs and FPGAs for throughput-oriented genomics workloads

The recent upsurge in the available amount of health data and the advances in next-generation sequencing are setting the ground for the long-awaited precision medicine. To process this deluge of data, bioinformatics workloads are becoming more complex and more computationally demanding. For this reasons they have been extended to support different computing architectures, such as GPUs and FPGAs, to leverage the form of parallelism typical of each of such architectures. The paper describes how a genomic workload such as k-mer frequency counting that takes advantage of a GPU can be offloaded to one or even more FPGAs. Moreover, it performs a comprehensive analysis of the FPGA acceleration comparing its performance to a non-accelerated configuration and when using a GPU. Lastly, the paper focuses on how, when using accelerators with a throughput-oriented workload, one should also take into consideration both kernel execution time and how well each accelerator board overlaps kernels and PCIe transferred. Results show that acceleration with two FPGAs can improve both time- and energy-to-solution for the entire accelerated part by a factor of 1.32x. Per contra, acceleration with one GPU delivers an improvement of 1.77x in time-to-solution but of a lower 1.49x in energy-to-solution due to persistently higher power consumption. The paper also evaluates how future FPGA boards with components (i.e., off-chip memory and PCIe) on par with those of the GPU board could provide an energy-efficient alternative to GPUs.Peer ReviewedPostprint (published version

Efficient execution of irregular programs on heterogeneous systems

Programmable accelerators such as GPUs, FPGAs, and DSPs enable modern systems to provide higher performance for many workloads than is possible by using conventional processors alone. Traditionally, portability of applications to these accelerators and between accelerators was a major hurdle in utilizing accelerators in a heterogeneous system. With the emergence of standardized programming APIs such as OpenCL, this problem is being ameliorated and many accelerators can now be programmed using a single API. In this work, we address the efficient execution of \emph{irregular} programs on heterogeneous systems. Irregular programs are used extensively in problem domains like graph analytics and finite-element methods, and they are characterized by data-dependent control flow and memory accesses that cannot be predicted at compile time. We focus on heterogeneous systems that provide a coherent memory to all devices. First, we describe a set of compiler and runtime techniques to support efficient execution of irregular programs on heterogeneous systems composed of a CPU and an integrated GPU. The compiler allows applications written in C++ to be executed on the GPU without any programmer effort. The runtime system solves the load imbalance arising from irregularity in the applications by dynamically assigning work to each device. Next, we present an alternative implementation strategy for irregular applications on a system with more heterogeneity. Specifically, graph applications can be expressed as \textit{producer-consumer} computations on FPGA+CPU heterogeneous systems. This approach allows for better utilization of the capabilities of each device and suggests a programming model for accelerators that goes beyond the \textit{offload} model. Finally, we explore efficient execution of irregular applications on accelerators that do not share a coherent memory with the master processor. For discrete GPUs, we explore implementation strategies of graph application, focusing on synchronization tradeoffs and present optimizations that address the synchronization overheads both within and across devices.Computer Science

MOCL:An Efficient OpenCL Implementation for the Matrix-2000 Architecture

This paper presents the design and implementation of an Open Computing Language (OpenCL) framework for the Matrix-2000 many-core architecture. This architecture is designed to replace the Intel XeonPhi accelerators of the TianHe-2 supercomputer. We share our experience and insights on how to design an effective OpenCL system for this new hardware accelerator. We propose a set of new analysis and optimizations to unlock the potential of the hardware. We extensively evaluate our approach using a wide range of OpenCL benchmarks on a single and multiple computing nodes. We present our design choices and provide guidance how to optimize code on the new Matrix-2000 architecture

Toward performance portability for CPUS and GPUS through algorithmic compositions

The diversity of microarchitecture designs in heterogeneous computing systems allows programs to achieve high performance and energy efficiency, but results in substantial software redevelopment cost for each type or generation of hardware. To mitigate this cost, a performance portable programming system is required. This work presents my solution to the performance portability problem. I argue that a new language is required for replacing the current practices of programming systems to achieve practical performance portability. To support my argument, I first demonstrate the limited performance portability of the current practices by showing quantitative and qualitative evidences. I identify the main limiting issues of conventional programming languages. To overcome the issues, I propose a new modular, composition-based programming language that can effectively express an algorithmic design space with functional polymorphism, and a compiler that can effectively explore the design space and facilitate many high-level optimization techniques. This proposed approach achieves no less than 70% of the performance of highly optimized vendor libraries such as Intel MKL and NVIDIA CUBLAS/CUSPARSE on an Intel i7-3820 Sandy Bridge CPU, an NVIDIA C2050 Fermi GPU, and an NVIDIA K20c Kepler GPU