34 research outputs found

    A Heterogeneous High Performance Computing Framework For Ill-Structured Spatial Join Processing

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    The frequently employed spatial join processing over two large layers of polygonal datasets to detect cross-layer polygon pairs (CPP) satisfying a join-predicate faces challenges common to ill-structured sparse problems, namely, that of identifying the few intersecting cross-layer edges out of the quadratic universe. The algorithmic engineering challenge is compounded by GPGPU SIMT architecture. Spatial join involves lightweight filter phase typically using overlap test over minimum bounding rectangles (MBRs) to discard majority of CPPs, followed by refinement phase to rigorously test the join predicate over the edges of the surviving CPPs. In this dissertation, we develop new techniques - algorithms, data structure, i/o, load balancing and system implementation - to accelerate the two-phase spatial-join processing. We present a new filtering technique, called Common MBR Filter (CMF), which changes the overall characteristic of the spatial join algorithms wherein the refinement phase is no longer the computational bottleneck. CMF is designed based on the insight that intersecting cross-layer edges must lie within the rectangular intersection of the MBRs of CPPs, their common MBRs (CMBR). We also address a key limitation of CMF for class of spatial datasets with either large or dense active CMBRs by extended CMF, called CMF-grid, that effectively employs both CMBR and grid techniques by embedding a uniform grid over CMBR of each CPP, but of suitably engineered sizes for different CPPs. To show efficiency of CMF-based filters, extensive mathematical and experimental analysis is provided. Then, two GPU-based spatial join systems are proposed based on two CMF versions including four components: 1) sort-based MBR filter, 2) CMF/CMF-grid, 3) point-in-polygon test, and, 4) edge-intersection test. The systems show two orders of magnitude speedup over the optimized sequential GEOS C++ library. Furthermore, we present a distributed system of heterogeneous compute nodes to exploit GPU-CPU computing in order to scale up the computation. A load balancing model based on Integer Linear Programming (ILP) is formulated for this system. We also provide three heuristic algorithms to approximate the ILP. Finally, we develop MPI-cuda-GIS system based on this heterogeneous computing model by integrating our CUDA-based GPU system into a newly designed distributed framework designed based on Message Passing Interface (MPI). Experimental results show good scalability and performance of MPI-cuda-GIS system

    Mining a Small Medical Data Set by Integrating the Decision Tree and t-test

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    [[abstract]]Although several researchers have used statistical methods to prove that aspiration followed by the injection of 95% ethanol left in situ (retention) is an effective treatment for ovarian endometriomas, very few discuss the different conditions that could generate different recovery rates for the patients. Therefore, this study adopts the statistical method and decision tree techniques together to analyze the postoperative status of ovarian endometriosis patients under different conditions. Since our collected data set is small, containing only 212 records, we use all of these data as the training data. Therefore, instead of using a resultant tree to generate rules directly, we use the value of each node as a cut point to generate all possible rules from the tree first. Then, using t-test, we verify the rules to discover some useful description rules after all possible rules from the tree have been generated. Experimental results show that our approach can find some new interesting knowledge about recurrent ovarian endometriomas under different conditions.[[journaltype]]國外[[incitationindex]]EI[[booktype]]紙本[[countrycodes]]FI

    DISTRIBUTED MULTIDIMENSIONAL INDEXING FOR SCIENTIFIC DATA ANALYSIS APPLICATIONS

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    Scientific data analysis applications require large scale computing power to effectively service client queries and also require large storage repositories for datasets that are generated continually from sensors and simulations. These scientific datasets are growing in size every day, and are becoming truly enormous. The goal of this dissertation is to provide efficient multidimensional indexing techniques that aid in navigating distributed scientific datasets. In this dissertation, we show significant improvements in accessing distributed large scientific datasets. The first approach we took to improve access to subsets of large multidimensional scientific datasets, was data chunking. The contents of scientific data files typically are a collection of multidimensional arrays, along with the corresponding metadata. Data chunking groups data elements into small chunks of a fixed, but data-specific, size to take advantage of spatio-temporal locality since it is not efficient to index individual data elements of large scientific datasets. The second approach was the design of an efficient multidimensional index for scientific datasets. This work investigates how existing multidimensional indexing structures perform on chunked scientific datasets, and compares their performance with that of our own indexing structure, SH-trees. Since R-trees were proposed, various multidimensional indexing structures have been proposed. However, there are a relatively small number of studies focused on improving the performance of indexing geographically distributed datasets, especially across heterogeneous machines. As a third approach, in an attempt to accelerate indexing performance for distributed datasets, we proposed several distributed multidimensional indexing schemes: replicated centralized indexing, hierarchical two level indexing, and decentralized two level indexing. Our experimental results show that great performance improvements are gained from distribution of multidimensional index. However, the design choices for distributed indexing, such as replication, partitioning, and decentralization, must be carefully considered since they may decrease the overall performance in certain situations. Therefore, this work provides performance guidelines to aid in selecting the best distributed multidimensional indexing scheme for various systems and applications. Finally, we describe how a distributed multidimensional indexing scheme can be used by a distributed multiple query optimization middleware as a case-study application to generate better query plans by leveraging information about the contents of remote caches

    IDEAS-1997-2021-Final-Programs

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    This document records the final program for each of the 26 meetings of the International Database and Engineering Application Symposium from 1997 through 2021. These meetings were organized in various locations on three continents. Most of the papers published during these years are in the digital libraries of IEEE(1997-2007) or ACM(2008-2021)

    Design and Analysis of Multidimensional Data Structures

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    Aquesta tesi està dedicada al disseny i a l'anàlisi d'estructures de dades multidimensionals, és a dir, estructures de dades que serveixen per emmagatzemar registres KK-dimensionals que solen representar-se com a punts en l'espai [0,1]K[0,1]^K. Aquestes estructures tenen aplicacions en diverses àrees de la informàtica com poden ser els sistemes d'informació geogràfica, la robòtica, el processament d'imatges, la world wide web, el data mining, entre d'altres. Les estructures de dades multidimensionals també es poden utilitzar com a indexos d'estructures de dades que emmagatzemen, possiblement en memòria externa, dades més complexes que els punts.Les estructures de dades multidimensionals han d'oferir la possibilitat de realitzar operacions d'inserció i esborrat de claus dinàmicament, a més de permetre realitzar cerques anomenades associatives. Exemples d'aquest tipus de cerques són les cerques per rangs ortogonals (quins punts cauen dintre d'un hiper-rectangle donat?) i les cerques del veí més proper (quin és el punt més proper a un punt donat?).Podem dividir les contribucions d'aquesta tesi en dues parts: La primera part està relacionada amb el disseny d'estructures de dades per a punts multidimensionals. Inclou el disseny d'arbres binaris KK-dimensionals al·leatoritzats (Randomized KK-d trees), el d'arbres quaternaris al·leatoritzats (Randomized quad trees) i el d'arbres multidimensionals amb punters de referència (Fingered multidimensional trees).La segona part analitza el comportament de les estructures de dades multidimensionals. En particular, s'analitza el cost mitjà de les cerques parcials en arbres KK-dimensionals relaxats, i el de les cerques per rang en diverses estructures de dades multidimensionals. Respecte al disseny d'estructures de dades multidimensionals, proposem algorismes al·leatoritzats d'inserció i esborrat de registres per als arbres KK-dimensionals i per als arbres quaternaris. Aquests algorismes produeixen arbres aleatoris, independentment de l'ordre d'inserció dels registres i desprès de qualsevol seqüència d'insercions i esborrats. De fet, el comportament esperat de les estructures produïdes mitjançant els algorismes al·leatoritzats és independent de la distribució de les dades d'entrada, tot i conservant la simplicitat i la flexibilitat dels arbres KK-dimensionals i quaternaris estàndard. Introduïm també els arbres multidimensionals amb punters de referència. Això permet que les estructures multidimensionals puguin aprofitar l'anomenada localitat de referència en cerques associatives altament correlacionades.I respecte de l'anàlisi d'estructures de dades multidimensionals, primer analitzem el cost esperat de las cerques parcials en els arbres KK-dimensionals relaxats. Seguidament utilitzem aquest resultat com a base per a l'anàlisi de les cerques per rangs ortogonals, juntament amb arguments combinatoris i geomètrics. D'aquesta manera obtenim un estimat asimptòtic precís del cost de les cerques per rangs ortogonals en els arbres KK-dimensionals aleatoris. Finalment, mostrem que les tècniques utilitzades es poden estendre fàcilment a d'altres estructures de dades i per tant proporcionem una anàlisi exacta del cost mitjà de cerques per rang en estructures de dades com són els arbres KK-dimensionals estàndard, els arbres quaternaris, els tries quaternaris i els tries KK-dimensionals.Esta tesis está dedicada al diseño y al análisis de estructuras de datos multidimensionales; es decir, estructuras de datos específicas para almacenar registros KK-dimensionales que suelen representarse como puntos en el espacio [0,1]K[0,1]^K. Estas estructuras de datos tienen aplicaciones en diversas áreas de la informática como son: los sistemas de información geográfica, la robótica, el procesamiento de imágenes, la world wide web o data mining, entre otras.Las estructuras de datos multidimensionales suelen utilizarse también como índices de estructuras que almacenan, posiblemente en memoria externa, datos complejos.Las estructuras de datos multidimensionales deben ofrecer la posibilidad de realizar operaciones de inserción y borrado de llaves de manera dinámica, pero además deben permitir realizar búsquedas asociativas en los registros almacenados. Ejemplos de búsquedas asociativas son las búsquedas por rangos ortogonales (¿qué puntos de la estructura de datos están dentro de un hiper-rectángulo dado?) y las búsquedas del vecino más cercano (¿cuál es el punto de la estructura de datos más cercano a un punto dado?).Las contribuciones de esta tesis se dividen en dos partes:La primera parte está dedicada al diseño de estructuras de datos para puntos multidimensionales, que incluye el diseño de los árboles binarios KK-dimensionales aleatorios (Randomized KK-d trees), el de los árboles cuaternarios aleatorios (Randomized quad trees), y el de los árboles multidimensionales con punteros de referencia (Fingered multidimensional trees).La segunda parte contiene contribuciones al análisis del comportamiento de las estructuras de datos para puntos multidimensionales. En particular, damos el análisis del costo promedio de las búsquedas parciales en los árboles KK-dimensionales relajados y el de las búsquedas por rango en varias estructuras de datos multidimensionales.Con respecto al diseño de estructuras de datos multidimensionales, proponemos algoritmos aleatorios de inserción y borrado de registros para los árboles KK-dimensionales y los árboles cuaternarios que producen árboles aleatorios independientemente del orden de inserción de los registros y después de cualquier secuencia de inserciones y borrados intercalados. De hecho, con la aleatorización garantizamos un buen rendimiento esperado de las estructuras de datos resultantes, que es independiente de la distribución de los datos de entrada, conservando la flexibilidad y la simplicidad de los árboles KK-dimensionales y de los árboles cuaternarios estándar. También proponemos los árboles multidimensionales con punteros de referencia, una técnica que permite que las estructuras de datos multidimensionales exploten la localidad de referencia en búsquedas asociativas que se presentan altamente correlacionadas.Con respecto al análisis de estructuras de datos multidimensionales, comenzamos dando un análisis preciso del costo esperado de las búsquedas parciales en los árboles KK-dimensionales relajados. A continuación, utilizamos este resultado como base para el análisis de las búsquedas por rangos ortogonales, combinándolo con argumentos combinatorios y geométricos. Como resultado obtenemos un estimado asintótico preciso del costo de las búsquedas por rango en los árboles KK-dimensionales relajados. Finalmente, mostramos que las técnicas utilizadas pueden extenderse fácilmente a otras estructuras de datos y por tanto proporcionamos un análisis preciso del costo promedio de búsquedas por rango en estructuras de datos como los árboles KK-dimensionales estándar, los árboles cuaternarios, los tries cuaternarios y los tries KK-dimensionales.This thesis is about the design and analysis of point multidimensional data structures: data structures that store KK-dimensional keys which we may abstract as points in [0,1]K[0,1]^K. These data structures are present in many applications of geographical information systems, image processing or robotics, among others. They are also frequently used as indexes of more complex data structures, possibly stored in external memory.Point multidimensional data structures must have capabilities such as insertion, deletion and (exact) search of items, but in addition they must support the so called {em associative queries}. Examples of these queries are orthogonal range queries (which are the items that fall inside a given hyper-rectangle?) and nearest neighbour queries (which is the closest item to some given point?).The contributions of this thesis are two-fold:Contributions to the design of point multidimensional data structures: the design of randomized KK-d trees, the design of randomized quad trees and the design of fingered multidimensional search trees;Contributions to the analysis of the performance of point multidimensional data structures: the average-case analysis of partial match queries in relaxed KK-d trees and the average-case analysis of orthogonal range queries in various multidimensional data structures.Concerning the design of randomized point multidimensional data structures, we propose randomized insertion and deletion algorithms for KK-d trees and quad trees that produce random KK-d trees and quad trees independently of the order in which items are inserted into them and after any sequence of interleaved insertions and deletions. The use of randomization provides expected performance guarantees, irrespective of any assumption on the data distribution, while retaining the simplicity and flexibility of standard KK-d trees and quad trees.Also related to the design of point multidimensional data structures is the proposal of fingered multidimensional search trees, a new technique that enhances point multidimensional data structures to exploit locality of reference in associative queries.With regards to performance analysis, we start by giving a precise analysis of the cost of partial matches in randomized KK-d trees. We use these results as a building block in our analysis of orthogonal range queries, together with combinatorial and geometric arguments and we provide a tight asymptotic estimate of the cost of orthogonal range search in randomized KK-d trees. We finally show that the techniques used apply easily to other data structures, so we can provide an analysis of the average cost of orthogonal range search in other data structures such as standard KK-d trees, quad trees, quad tries, and KK-d tries

    Design and Analysis of Multidimensional Data Structures

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    Aquesta tesi està dedicada al disseny i a l'anàlisi d'estructures de dades multidimensionals, és a dir, estructures de dades que serveixen per emmagatzemar registres KK-dimensionals que solen representar-se com a punts en l'espai [0,1]K[0,1]^K. Aquestes estructures tenen aplicacions en diverses àrees de la informàtica com poden ser els sistemes d'informació geogràfica, la robòtica, el processament d'imatges, la world wide web, el data mining, entre d'altres. Les estructures de dades multidimensionals també es poden utilitzar com a indexos d'estructures de dades que emmagatzemen, possiblement en memòria externa, dades més complexes que els punts.Les estructures de dades multidimensionals han d'oferir la possibilitat de realitzar operacions d'inserció i esborrat de claus dinàmicament, a més de permetre realitzar cerques anomenades associatives. Exemples d'aquest tipus de cerques són les cerques per rangs ortogonals (quins punts cauen dintre d'un hiper-rectangle donat?) i les cerques del veí més proper (quin és el punt més proper a un punt donat?).Podem dividir les contribucions d'aquesta tesi en dues parts: La primera part està relacionada amb el disseny d'estructures de dades per a punts multidimensionals. Inclou el disseny d'arbres binaris KK-dimensionals al·leatoritzats (Randomized KK-d trees), el d'arbres quaternaris al·leatoritzats (Randomized quad trees) i el d'arbres multidimensionals amb punters de referència (Fingered multidimensional trees).La segona part analitza el comportament de les estructures de dades multidimensionals. En particular, s'analitza el cost mitjà de les cerques parcials en arbres KK-dimensionals relaxats, i el de les cerques per rang en diverses estructures de dades multidimensionals. Respecte al disseny d'estructures de dades multidimensionals, proposem algorismes al·leatoritzats d'inserció i esborrat de registres per als arbres KK-dimensionals i per als arbres quaternaris. Aquests algorismes produeixen arbres aleatoris, independentment de l'ordre d'inserció dels registres i desprès de qualsevol seqüència d'insercions i esborrats. De fet, el comportament esperat de les estructures produïdes mitjançant els algorismes al·leatoritzats és independent de la distribució de les dades d'entrada, tot i conservant la simplicitat i la flexibilitat dels arbres KK-dimensionals i quaternaris estàndard. Introduïm també els arbres multidimensionals amb punters de referència. Això permet que les estructures multidimensionals puguin aprofitar l'anomenada localitat de referència en cerques associatives altament correlacionades.I respecte de l'anàlisi d'estructures de dades multidimensionals, primer analitzem el cost esperat de las cerques parcials en els arbres KK-dimensionals relaxats. Seguidament utilitzem aquest resultat com a base per a l'anàlisi de les cerques per rangs ortogonals, juntament amb arguments combinatoris i geomètrics. D'aquesta manera obtenim un estimat asimptòtic precís del cost de les cerques per rangs ortogonals en els arbres KK-dimensionals aleatoris. Finalment, mostrem que les tècniques utilitzades es poden estendre fàcilment a d'altres estructures de dades i per tant proporcionem una anàlisi exacta del cost mitjà de cerques per rang en estructures de dades com són els arbres KK-dimensionals estàndard, els arbres quaternaris, els tries quaternaris i els tries KK-dimensionals.Esta tesis está dedicada al diseño y al análisis de estructuras de datos multidimensionales; es decir, estructuras de datos específicas para almacenar registros KK-dimensionales que suelen representarse como puntos en el espacio [0,1]K[0,1]^K. Estas estructuras de datos tienen aplicaciones en diversas áreas de la informática como son: los sistemas de información geográfica, la robótica, el procesamiento de imágenes, la world wide web o data mining, entre otras.Las estructuras de datos multidimensionales suelen utilizarse también como índices de estructuras que almacenan, posiblemente en memoria externa, datos complejos.Las estructuras de datos multidimensionales deben ofrecer la posibilidad de realizar operaciones de inserción y borrado de llaves de manera dinámica, pero además deben permitir realizar búsquedas asociativas en los registros almacenados. Ejemplos de búsquedas asociativas son las búsquedas por rangos ortogonales (¿qué puntos de la estructura de datos están dentro de un hiper-rectángulo dado?) y las búsquedas del vecino más cercano (¿cuál es el punto de la estructura de datos más cercano a un punto dado?).Las contribuciones de esta tesis se dividen en dos partes:La primera parte está dedicada al diseño de estructuras de datos para puntos multidimensionales, que incluye el diseño de los árboles binarios KK-dimensionales aleatorios (Randomized KK-d trees), el de los árboles cuaternarios aleatorios (Randomized quad trees), y el de los árboles multidimensionales con punteros de referencia (Fingered multidimensional trees).La segunda parte contiene contribuciones al análisis del comportamiento de las estructuras de datos para puntos multidimensionales. En particular, damos el análisis del costo promedio de las búsquedas parciales en los árboles KK-dimensionales relajados y el de las búsquedas por rango en varias estructuras de datos multidimensionales.Con respecto al diseño de estructuras de datos multidimensionales, proponemos algoritmos aleatorios de inserción y borrado de registros para los árboles KK-dimensionales y los árboles cuaternarios que producen árboles aleatorios independientemente del orden de inserción de los registros y después de cualquier secuencia de inserciones y borrados intercalados. De hecho, con la aleatorización garantizamos un buen rendimiento esperado de las estructuras de datos resultantes, que es independiente de la distribución de los datos de entrada, conservando la flexibilidad y la simplicidad de los árboles KK-dimensionales y de los árboles cuaternarios estándar. También proponemos los árboles multidimensionales con punteros de referencia, una técnica que permite que las estructuras de datos multidimensionales exploten la localidad de referencia en búsquedas asociativas que se presentan altamente correlacionadas.Con respecto al análisis de estructuras de datos multidimensionales, comenzamos dando un análisis preciso del costo esperado de las búsquedas parciales en los árboles KK-dimensionales relajados. A continuación, utilizamos este resultado como base para el análisis de las búsquedas por rangos ortogonales, combinándolo con argumentos combinatorios y geométricos. Como resultado obtenemos un estimado asintótico preciso del costo de las búsquedas por rango en los árboles KK-dimensionales relajados. Finalmente, mostramos que las técnicas utilizadas pueden extenderse fácilmente a otras estructuras de datos y por tanto proporcionamos un análisis preciso del costo promedio de búsquedas por rango en estructuras de datos como los árboles KK-dimensionales estándar, los árboles cuaternarios, los tries cuaternarios y los tries KK-dimensionales.This thesis is about the design and analysis of point multidimensional data structures: data structures that store KK-dimensional keys which we may abstract as points in [0,1]K[0,1]^K. These data structures are present in many applications of geographical information systems, image processing or robotics, among others. They are also frequently used as indexes of more complex data structures, possibly stored in external memory.Point multidimensional data structures must have capabilities such as insertion, deletion and (exact) search of items, but in addition they must support the so called {em associative queries}. Examples of these queries are orthogonal range queries (which are the items that fall inside a given hyper-rectangle?) and nearest neighbour queries (which is the closest item to some given point?).The contributions of this thesis are two-fold:Contributions to the design of point multidimensional data structures: the design of randomized KK-d trees, the design of randomized quad trees and the design of fingered multidimensional search trees;Contributions to the analysis of the performance of point multidimensional data structures: the average-case analysis of partial match queries in relaxed KK-d trees and the average-case analysis of orthogonal range queries in various multidimensional data structures.Concerning the design of randomized point multidimensional data structures, we propose randomized insertion and deletion algorithms for KK-d trees and quad trees that produce random KK-d trees and quad trees independently of the order in which items are inserted into them and after any sequence of interleaved insertions and deletions. The use of randomization provides expected performance guarantees, irrespective of any assumption on the data distribution, while retaining the simplicity and flexibility of standard KK-d trees and quad trees.Also related to the design of point multidimensional data structures is the proposal of fingered multidimensional search trees, a new technique that enhances point multidimensional data structures to exploit locality of reference in associative queries.With regards to performance analysis, we start by giving a precise analysis of the cost of partial matches in randomized KK-d trees. We use these results as a building block in our analysis of orthogonal range queries, together with combinatorial and geometric arguments and we provide a tight asymptotic estimate of the cost of orthogonal range search in randomized KK-d trees. We finally show that the techniques used apply easily to other data structures, so we can provide an analysis of the average cost of orthogonal range search in other data structures such as standard KK-d trees, quad trees, quad tries, and KK-d tries

    Energy Measurements of High Performance Computing Systems: From Instrumentation to Analysis

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    Energy efficiency is a major criterion for computing in general and High Performance Computing in particular. When optimizing for energy efficiency, it is essential to measure the underlying metric: energy consumption. To fully leverage energy measurements, their quality needs to be well-understood. To that end, this thesis provides a rigorous evaluation of various energy measurement techniques. I demonstrate how the deliberate selection of instrumentation points, sensors, and analog processing schemes can enhance the temporal and spatial resolution while preserving a well-known accuracy. Further, I evaluate a scalable energy measurement solution for production HPC systems and address its shortcomings. Such high-resolution and large-scale measurements present challenges regarding the management of large volumes of generated metric data. I address these challenges with a scalable infrastructure for collecting, storing, and analyzing metric data. With this infrastructure, I also introduce a novel persistent storage scheme for metric time series data, which allows efficient queries for aggregate timelines. To ensure that it satisfies the demanding requirements for scalable power measurements, I conduct an extensive performance evaluation and describe a productive deployment of the infrastructure. Finally, I describe different approaches and practical examples of analyses based on energy measurement data. In particular, I focus on the combination of energy measurements and application performance traces. However, interweaving fine-grained power recordings and application events requires accurately synchronized timestamps on both sides. To overcome this obstacle, I develop a resilient and automated technique for time synchronization, which utilizes crosscorrelation of a specifically influenced power measurement signal. Ultimately, this careful combination of sophisticated energy measurements and application performance traces yields a detailed insight into application and system energy efficiency at full-scale HPC systems and down to millisecond-range regions.:1 Introduction 2 Background and Related Work 2.1 Basic Concepts of Energy Measurements 2.1.1 Basics of Metrology 2.1.2 Measuring Voltage, Current, and Power 2.1.3 Measurement Signal Conditioning and Analog-to-Digital Conversion 2.2 Power Measurements for Computing Systems 2.2.1 Measuring Compute Nodes using External Power Meters 2.2.2 Custom Solutions for Measuring Compute Node Power 2.2.3 Measurement Solutions of System Integrators 2.2.4 CPU Energy Counters 2.2.5 Using Models to Determine Energy Consumption 2.3 Processing of Power Measurement Data 2.3.1 Time Series Databases 2.3.2 Data Center Monitoring Systems 2.4 Influences on the Energy Consumption of Computing Systems 2.4.1 Processor Power Consumption Breakdown 2.4.2 Energy-Efficient Hardware Configuration 2.5 HPC Performance and Energy Analysis 2.5.1 Performance Analysis Techniques 2.5.2 HPC Performance Analysis Tools 2.5.3 Combining Application and Power Measurements 2.6 Conclusion 3 Evaluating and Improving Energy Measurements 3.1 Description of the Systems Under Test 3.2 Instrumentation Points and Measurement Sensors 3.2.1 Analog Measurement at Voltage Regulators 3.2.2 Instrumentation with Hall Effect Transducers 3.2.3 Modular Instrumentation of DC Consumers 3.2.4 Optimal Wiring for Shunt-Based Measurements 3.2.5 Node-Level Instrumentation for HPC Systems 3.3 Analog Signal Conditioning and Analog-to-Digital Conversion 3.3.1 Signal Amplification 3.3.2 Analog Filtering and Analog-To-Digital Conversion 3.3.3 Integrated Solutions for High-Resolution Measurement 3.4 Accuracy Evaluation and Calibration 3.4.1 Synthetic Workloads for Evaluating Power Measurements 3.4.2 Improving and Evaluating the Accuracy of a Single-Node Measuring System 3.4.3 Absolute Accuracy Evaluation of a Many-Node Measuring System 3.5 Evaluating Temporal Granularity and Energy Correctness 3.5.1 Measurement Signal Bandwidth at Different Instrumentation Points 3.5.2 Retaining Energy Correctness During Digital Processing 3.6 Evaluating CPU Energy Counters 3.6.1 Energy Readouts with RAPL 3.6.2 Methodology 3.6.3 RAPL on Intel Sandy Bridge-EP 3.6.4 RAPL on Intel Haswell-EP and Skylake-SP 3.7 Conclusion 4 A Scalable Infrastructure for Processing Power Measurement Data 4.1 Requirements for Power Measurement Data Processing 4.2 Concepts and Implementation of Measurement Data Management 4.2.1 Message-Based Communication between Agents 4.2.2 Protocols 4.2.3 Application Programming Interfaces 4.2.4 Efficient Metric Time Series Storage and Retrieval 4.2.5 Hierarchical Timeline Aggregation 4.3 Performance Evaluation 4.3.1 Benchmark Hardware Specifications 4.3.2 Throughput in Symmetric Configuration with Replication 4.3.3 Throughput with Many Data Sources and Single Consumers 4.3.4 Temporary Storage in Message Queues 4.3.5 Persistent Metric Time Series Request Performance 4.3.6 Performance Comparison with Contemporary Time Series Storage Solutions 4.3.7 Practical Usage of MetricQ 4.4 Conclusion 5 Energy Efficiency Analysis 5.1 General Energy Efficiency Analysis Scenarios 5.1.1 Live Visualization of Power Measurements 5.1.2 Visualization of Long-Term Measurements 5.1.3 Integration in Application Performance Traces 5.1.4 Graphical Analysis of Application Power Traces 5.2 Correlating Power Measurements with Application Events 5.2.1 Challenges for Time Synchronization of Power Measurements 5.2.2 Reliable Automatic Time Synchronization with Correlation Sequences 5.2.3 Creating a Correlation Signal on a Power Measurement Channel 5.2.4 Processing the Correlation Signal and Measured Power Values 5.2.5 Common Oversampling of the Correlation Signals at Different Rates 5.2.6 Evaluation of Correlation and Time Synchronization 5.3 Use Cases for Application Power Traces 5.3.1 Analyzing Complex Power Anomalies 5.3.2 Quantifying C-State Transitions 5.3.3 Measuring the Dynamic Power Consumption of HPC Applications 5.4 Conclusion 6 Summary and Outloo
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