Metaheuristic design of feedforward neural networks: a review of two decades of research

Over the past two decades, the feedforward neural network (FNN) optimization has been a key interest among the researchers and practitioners of multiple disciplines. The FNN optimization is often viewed from the various perspectives: the optimization of weights, network architecture, activation nodes, learning parameters, learning environment, etc. Researchers adopted such different viewpoints mainly to improve the FNN's generalization ability. The gradient-descent algorithm such as backpropagation has been widely applied to optimize the FNNs. Its success is evident from the FNN's application to numerous real-world problems. However, due to the limitations of the gradient-based optimization methods, the metaheuristic algorithms including the evolutionary algorithms, swarm intelligence, etc., are still being widely explored by the researchers aiming to obtain generalized FNN for a given problem. This article attempts to summarize a broad spectrum of FNN optimization methodologies including conventional and metaheuristic approaches. This article also tries to connect various research directions emerged out of the FNN optimization practices, such as evolving neural network (NN), cooperative coevolution NN, complex-valued NN, deep learning, extreme learning machine, quantum NN, etc. Additionally, it provides interesting research challenges for future research to cope-up with the present information processing era

Feature Learning from Spectrograms for Assessment of Personality Traits

Several methods have recently been proposed to analyze speech and automatically infer the personality of the speaker. These methods often rely on prosodic and other hand crafted speech processing features extracted with off-the-shelf toolboxes. To achieve high accuracy, numerous features are typically extracted using complex and highly parameterized algorithms. In this paper, a new method based on feature learning and spectrogram analysis is proposed to simplify the feature extraction process while maintaining a high level of accuracy. The proposed method learns a dictionary of discriminant features from patches extracted in the spectrogram representations of training speech segments. Each speech segment is then encoded using the dictionary, and the resulting feature set is used to perform classification of personality traits. Experiments indicate that the proposed method achieves state-of-the-art results with a significant reduction in complexity when compared to the most recent reference methods. The number of features, and difficulties linked to the feature extraction process are greatly reduced as only one type of descriptors is used, for which the 6 parameters can be tuned automatically. In contrast, the simplest reference method uses 4 types of descriptors to which 6 functionals are applied, resulting in over 20 parameters to be tuned.Comment: 12 pages, 3 figure

Weighted Round Robin Configuration for Worst-Case Delay Optimization in Network-on-Chip

We propose an approach for computing the end-to-end delay bound of individual variable bit-rate flows in a FIFO multiplexer with aggregate scheduling under Weighted Round Robin (WRR) policy. To this end, we use network calculus to derive per-flow end-to-end equivalent service curves employed for computing Least Upper Delay Bounds (LUDBs) of individual flows. Since real time applications are going to meet guaranteed services with lower delay bounds, we optimize weights in WRR policy to minimize LUDBs while satisfying performance constraints. We formulate two constrained delay optimization problems, namely, Minimize-Delay and Multiobjective optimization. Multi-objective optimization has both total delay bounds and their variance as minimization objectives. The proposed optimizations are solved using a genetic algorithm. A Video Object Plane Decoder (VOPD) case study exhibits 15.4% reduction of total worst-case delays and 40.3% reduction on the variance of delays when compared with round robin policy. The optimization algorithm has low run-time complexity, enabling quick exploration of large design spaces. We conclude that an appropriate weight allocation can be a valuable instrument for delay optimization in on-chip network designs

Efficient analysis and storage of large-scale genomic data

The impending advent of population-scaled sequencing cohorts involving tens of millions of individuals with matched phenotypic measurements will produce unprecedented volumes of genetic data. Storing and analysing such gargantuan datasets places computational performance at a pivotal position in medical genomics. In this thesis, I explore the potential for accelerating and parallelizing standard genetics workflows, file formats, and algorithms using both hardware-accelerated vectorization, parallel and distributed algorithms, and heterogeneous computing. First, I describe a novel bit-counting operation termed the positional population-count, which can be used together with succinct representations and standard efficient operations to accelerate many genetic calculations. In order to enable the use of this new operator and the canonical population count on any target machine I developed a unified low-level library using CPU dispatching to select the optimal method contingent on the available instruction set architecture and the given input size at run-time. As a proof-of-principle application, I apply the positional population-count operator to computing quality control-related summary statistics for terabyte-scaled sequencing readsets with >3,800-fold speed improvements. As another application, I describe a framework for efficiently computing the cardinality of set intersection using these operators and applied this framework to efficiently compute genome-wide linkage-disequilibrium in datasets with up to 67 million samples resulting in up to >60-fold improvements in speed for dense genotypic vectors and up to >250,000-fold savings in memory and >100,000-fold improvement in speed for sparse genotypic vectors. I next describe a framework for handling the terabytes of compressed output data and describe graphical routines for visualizing long-range linkage-disequilibrium blocks as seen over many human centromeres. Finally, I describe efficient algorithms for storing and querying very large genetic datasets and specialized algorithms for the genotype component of such datasets with >10,000-fold savings in memory compared to the current interchange format.Wellcome Trus

Protein-Ligand Binding Affinity Directed Multi-Objective Drug Design Based on Fragment Representation Methods

Drug discovery is a challenging process with a vast molecular space to be explored and numerous pharmacological properties to be appropriately considered. Among various drug design protocols, fragment-based drug design is an effective way of constraining the search space and better utilizing biologically active compounds. Motivated by fragment-based drug search for a given protein target and the emergence of artificial intelligence (AI) approaches in this field, this work advances the field of in silico drug design by (1) integrating a graph fragmentation-based deep generative model with a deep evolutionary learning process for large-scale multi-objective molecular optimization, and (2) applying protein-ligand binding affinity scores together with other desired physicochemical properties as objectives. Our experiments show that the proposed method can generate novel molecules with improved property values and binding affinities

A hybrid multi-objective evolutionary algorithm-based semantic foundation for sustainable distributed manufacturing systems

Rising energy prices, increasing maintenance costs, and strict environmental regimes have augmented the already existing pressure on the contemporary manufacturing environment. Although the decentralization of supply chain has led to rapid advancements in manufacturing systems, finding an efficient supplier simultaneously from the pool of available ones as per customer requirement and enhancing the process planning and scheduling functions are the predominant approaches still needed to be addressed. Therefore, this paper aims to address this issue by considering a set of gear manufacturing industries located across India as a case study. An integrated classifier-assisted evolutionary multi-objective evolutionary approach is proposed for solving the objectives of makespan, energy consumption, and increased service utilization rate, interoperability, and reliability. To execute the approach initially, text-mining-based supervised machine-learning models, namely Decision Tree, Naïve Bayes, Random Forest, and Support Vector Machines (SVM) were adopted for the classification of suppliers into task-specific suppliers. Following this, with the identified suppliers as input, the problem was formulated as a multi-objective Mixed-Integer Linear Programming (MILP) model. We then proposed a Hybrid Multi-Objective Moth Flame Optimization algorithm (HMFO) to optimize process planning and scheduling functions. Numerical experiments have been carried out with the formulated problem for 10 different instances, along with a comparison of the results with a Non-Dominated Sorting Genetic Algorithm (NSGA-II) to illustrate the feasibility of the approach.The project is funded by Department of Science and Technology, Science and Engineering Research Board (DST-SERB), Statutory Body Established through an Act of Parliament: SERB Act 2008, Government of India with Sanction Order No ECR/2016/001808, and also by FCT–Portuguese Foundation for Science and Technology within the R&D Units Projects Scopes: UIDB/00319/2020, UIDP/04077/2020, and UIDB/04077/2020