Exploiting non-constant safe memory in resilient algorithms and data structures

We extend the Faulty RAM model by Finocchi and Italiano (2008) by adding a safe memory of arbitrary size $S$, and we then derive tradeoffs between the performance of resilient algorithmic techniques and the size of the safe memory. Let $\delta$ and $\alpha$ denote, respectively, the maximum amount of faults which can happen during the execution of an algorithm and the actual number of occurred faults, with $\alpha \leq \delta$. We propose a resilient algorithm for sorting $n$ entries which requires $O\left(n\log n+\alpha (\delta/S + \log S)\right)$ time and uses $\Theta(S)$ safe memory words. Our algorithm outperforms previous resilient sorting algorithms which do not exploit the available safe memory and require $O\left(n\log n+ \alpha\delta\right)$ time. Finally, we exploit our sorting algorithm for deriving a resilient priority queue. Our implementation uses $\Theta(S)$ safe memory words and $\Theta(n)$ faulty memory words for storing $n$ keys, and requires $O\left(\log n + \delta/S\right)$ amortized time for each insert and deletemin operation. Our resilient priority queue improves the $O\left(\log n + \delta\right)$ amortized time required by the state of the art.Comment: To appear in Theoretical Computer Science, 201

Selection in the Presence of Memory Faults, with Applications to In-place Resilient Sorting

The selection problem, where one wishes to locate the $k^{th}$ smallest element in an unsorted array of size $n$, is one of the basic problems studied in computer science. The main focus of this work is designing algorithms for solving the selection problem in the presence of memory faults. These can happen as the result of cosmic rays, alpha particles, or hardware failures. Specifically, the computational model assumed here is a faulty variant of the RAM model (abbreviated as FRAM), which was introduced by Finocchi and Italiano. In this model, the content of memory cells might get corrupted adversarially during the execution, and the algorithm is given an upper bound $\delta$ on the number of corruptions that may occur. The main contribution of this work is a deterministic resilient selection algorithm with optimal O(n) worst-case running time. Interestingly, the running time does not depend on the number of faults, and the algorithm does not need to know $\delta$. The aforementioned resilient selection algorithm can be used to improve the complexity bounds for resilient $k$-d trees developed by Gieseke, Moruz and Vahrenhold. Specifically, the time complexity for constructing a $k$-d tree is improved from $O(n\log^2 n + \delta^2)$ to $O(n \log n)$. Besides the deterministic algorithm, a randomized resilient selection algorithm is developed, which is simpler than the deterministic one, and has $O(n + \alpha)$ expected time complexity and O(1) space complexity (i.e., is in-place). This algorithm is used to develop the first resilient sorting algorithm that is in-place and achieves optimal $O(n\log n + \alpha\delta)$ expected running time.Comment: 26 page

Lossless fault-tolerant data structures with additive overhead

12th International Symposium, WADS 2011, New York, NY, USA, August 15-17, 2011. ProceedingsWe develop the first dynamic data structures that tolerate δ memory faults, lose no data, and incur only an O(δ ) additive overhead in overall space and time per operation. We obtain such data structures for arrays, linked lists, binary search trees, interval trees, predecessor search, and suffix trees. Like previous data structures, δ must be known in advance, but we show how to restore pristine state in linear time, in parallel with queries, making δ just a bound on the rate of memory faults. Our data structures require Θ(δ) words of safe memory during an operation, which may not be theoretically necessary but seems a practical assumption.Center for Massive Data Algorithmics (MADALGO

Efficient and Error-Correcting Data Structures for Membership and Polynomial Evaluation

We construct efficient data structures that are resilient against a constant fraction of adversarial noise. Our model requires that the decoder answers most queries correctly with high probability and for the remaining queries, the decoder with high probability either answers correctly or declares "don't know." Furthermore, if there is no noise on the data structure, it answers all queries correctly with high probability. Our model is the common generalization of a model proposed recently by de Wolf and the notion of "relaxed locally decodable codes" developed in the PCP literature. We measure the efficiency of a data structure in terms of its length, measured by the number of bits in its representation, and query-answering time, measured by the number of bit-probes to the (possibly corrupted) representation. In this work, we study two data structure problems: membership and polynomial evaluation. We show that these two problems have constructions that are simultaneously efficient and error-correcting.Comment: An abridged version of this paper appears in STACS 201

On the Error Resilience of Ordered Binary Decision Diagrams

Ordered Binary Decision Diagrams (OBDDs) are a data structure that is used in an increasing number of fields of Computer Science (e.g., logic synthesis, program verification, data mining, bioinformatics, and data protection) for representing and manipulating discrete structures and Boolean functions. The purpose of this paper is to study the error resilience of OBDDs and to design a resilient version of this data structure, i.e., a self-repairing OBDD. In particular, we describe some strategies that make reduced ordered OBDDs resilient to errors in the indexes, that are associated to the input variables, or in the pointers (i.e., OBDD edges) of the nodes. These strategies exploit the inherent redundancy of the data structure, as well as the redundancy introduced by its efficient implementations. The solutions we propose allow the exact restoring of the original OBDD and are suitable to be applied to classical software packages for the manipulation of OBDDs currently in use. Another result of the paper is the definition of a new canonical OBDD model, called {\em Index-resilient Reduced OBDD}, which guarantees that a node with a faulty index has a reconstruction cost $O(k)$, where $k$ is the number of nodes with corrupted index

Resilient Level Ancestor, Bottleneck, and Lowest Common Ancestor Queries in Dynamic Trees

We study the problem of designing a resilient data structure maintaining a tree under the Faulty-RAM model [Finocchi and Italiano, STOC\u2704] in which up to ? memory words can be corrupted by an adversary. Our data structure stores a rooted dynamic tree that can be updated via the addition of new leaves, requires linear size, and supports resilient (weighted) level ancestor queries, lowest common ancestor queries, and bottleneck vertex queries in O(?) worst-case time per operation

Error-Correcting Data Structures

We study data structures in the presence of adversarial noise. We want to encode a given object in a succinct data structure that enables us to efficiently answer specific queries about the object, even if the data structure has been corrupted by a constant fraction of errors. This new model is the common generalization of (static) data structures and locally decodable error-correcting codes. The main issue is the tradeoff between the space used by the data structure and the time (number of probes) needed to answer a query about the encoded object. We prove a number of upper and lower bounds on various natural error-correcting data structure problems. In particular, we show that the optimal length of error-correcting data structures for the Membership problem (where we want to store subsets of size s from a universe of size n) is closely related to the optimal length of locally decodable codes for s-bit strings.Comment: 15 pages LaTeX; an abridged version will appear in the Proceedings of the STACS 2009 conferenc

Robust and Adaptive Search

Binary search finds a given element in a sorted array with an optimal number of log n queries. However, binary search fails even when the array is only slightly disordered or access to its elements is subject to errors. We study the worst-case query complexity of search algorithms that are robust to imprecise queries and that adapt to perturbations of the order of the elements. We give (almost) tight results for various parameters that quantify query errors and that measure array disorder. In particular, we exhibit settings where query complexities of log n + ck, (1+epsilon) log n + ck, and sqrt(cnk)+o(nk) are best-possible for parameter value k, any epsilon > 0, and constant c

The Parallel Persistent Memory Model

We consider a parallel computational model that consists of $P$ processors, each with a fast local ephemeral memory of limited size, and sharing a large persistent memory. The model allows for each processor to fault with bounded probability, and possibly restart. On faulting all processor state and local ephemeral memory are lost, but the persistent memory remains. This model is motivated by upcoming non-volatile memories that are as fast as existing random access memory, are accessible at the granularity of cache lines, and have the capability of surviving power outages. It is further motivated by the observation that in large parallel systems, failure of processors and their caches is not unusual. Within the model we develop a framework for developing locality efficient parallel algorithms that are resilient to failures. There are several challenges, including the need to recover from failures, the desire to do this in an asynchronous setting (i.e., not blocking other processors when one fails), and the need for synchronization primitives that are robust to failures. We describe approaches to solve these challenges based on breaking computations into what we call capsules, which have certain properties, and developing a work-stealing scheduler that functions properly within the context of failures. The scheduler guarantees a time bound of $O(W/P_A + D(P/P_A) \lceil\log_{1/f} W\rceil)$ in expectation, where $W$ and $D$ are the work and depth of the computation (in the absence of failures), $P_A$ is the average number of processors available during the computation, and $f \le 1/2$ is the probability that a capsule fails. Within the model and using the proposed methods, we develop efficient algorithms for parallel sorting and other primitives.Comment: This paper is the full version of a paper at SPAA 2018 with the same nam