Bar 1-Visibility Graphs and their relation to other Nearly Planar Graphs

A graph is called a strong (resp. weak) bar 1-visibility graph if its vertices can be represented as horizontal segments (bars) in the plane so that its edges are all (resp. a subset of) the pairs of vertices whose bars have a $\epsilon$-thick vertical line connecting them that intersects at most one other bar. We explore the relation among weak (resp. strong) bar 1-visibility graphs and other nearly planar graph classes. In particular, we study their relation to 1-planar graphs, which have a drawing with at most one crossing per edge; quasi-planar graphs, which have a drawing with no three mutually crossing edges; the squares of planar 1-flow networks, which are upward digraphs with in- or out-degree at most one. Our main results are that 1-planar graphs and the (undirected) squares of planar 1-flow networks are weak bar 1-visibility graphs and that these are quasi-planar graphs

Upward Book Embeddings of st-Graphs

We study k-page upward book embeddings (kUBEs) of st-graphs, that is, book embeddings of single-source single-sink directed acyclic graphs on k pages with the additional requirement that the vertices of the graph appear in a topological ordering along the spine of the book. We show that testing whether a graph admits a kUBE is NP-complete for k >= 3. A hardness result for this problem was previously known only for k = 6 [Heath and Pemmaraju, 1999]. Motivated by this negative result, we focus our attention on k=2. On the algorithmic side, we present polynomial-time algorithms for testing the existence of 2UBEs of planar st-graphs with branchwidth b and of plane st-graphs whose faces have a special structure. These algorithms run in O(f(b)* n+n^3) time and O(n) time, respectively, where f is a singly-exponential function on b. Moreover, on the combinatorial side, we present two notable families of plane st-graphs that always admit an embedding-preserving 2UBE

Hardness Results for Dynamic Problems by Extensions of Fredman and Saks’ Chronogram Method

We introduce new models for dynamic computation based on the cell probe model of Fredman and Yao. We give these models access to nondeterministic queries or the right answer +-1 as an oracle. We prove that for the dynamic partial sum problem, these new powers do not help, the problem retains its lower bound of  Omega(log n/log log n). From these results we easily derive a large number of lower bounds of order Omega(log n/log log n) for conventional dynamic models like the random access machine. We prove lower bounds for dynamic algorithms for reachability in directed graphs, planarity testing, planar point location, incremental parsing, fundamental data structure problems like maintaining the majority of the prefixes of a string of bits and range queries. We characterise the complexity of maintaining the value of any symmetric function on the prefixes of a bit string

Planare Graphen und ihre Dualgraphen auf Zylinderoberflächen

In this thesis, we investigates plane drawings of undirected and directed graphs on cylinder surfaces. In the case of undirected graphs, the vertices are positioned on a line that is parallel to the cylinder’s axis and the edge curves must not intersect this line. We show that a plane drawing is possible if and only if the graph is a double-ended queue (deque) graph, i. e., the vertices of the graph can be processed according to a linear order and the edges correspond to items in the deque inserted and removed at their end vertices. A surprising consequence resulting from these observations is that the deque characterizes planar graphs with a Hamiltonian path. This result extends the known characterization of planar graphs with a Hamiltonian cycle by two stacks. By these insights, we also obtain a new characterization of queue graphs and their duals. We also consider the complexity of deciding whether a graph is a deque graph and prove that it is NP-complete. By introducing a split operation, we obtain the splittable deque and show that it characterizes planarity. For the proof, we devise an algorithm that uses the splittable deque to test whether a rotation system is planar. In the case of directed graphs, we study upward plane drawings where the edge curves follow the direction of the cylinder’s axis (standing upward planarity; SUP) or they wind around the axis (rolling upward planarity; RUP). We characterize RUP graphs by means of their duals and show that RUP and SUP swap their roles when considering a graph and its dual. There is a physical interpretation underlying this characterization: A SUP graph is to its RUP dual graph as electric current passing through a conductor to the magnetic field surrounding the conductor. Whereas testing whether a graph is RUP is NP-hard in general [Bra14], for directed graphs without sources and sink, we develop a linear-time recognition algorithm that is based on our dual graph characterization of RUP graphs.Die Arbeit beschäftigt sich mit planaren Zeichnungen ungerichteter und gerichteter Graphen auf Zylinderoberflächen. Im ungerichteten Fall werden Zeichnungen betrachtet, bei denen die Knoten auf einer Linie parallel zur Zylinderachse positioniert werden und die Kanten diese Linie nicht schneiden dürfen. Es kann gezeigt werden, dass eine planare Zeichnung genau dann möglich ist, wenn die Kanten des Graphen in einer double-ended queue (Deque) verarbeitet werden können. Ebenso lassen sich dadurch Queue, Stack und Doppelstack charakterisieren. Eine überraschende Konsequenz aus diesen Erkenntnissen ist, dass die Deque genau die planaren Graphen mit Hamiltonpfad charakterisiert. Dies erweitert die bereits bekannte Charakterisierung planarer Graphen mit Hamiltonkreis durch den Doppelstack. Im gerichteten Fall müssen die Kantenkurven entweder in Richtung der Zylinderachse verlaufen (SUP-Graphen) oder sich um die Achse herumbewegen (RUP-Graphen). Die Arbeit charakterisiert RUP-Graphen und zeigt, dass RUP und SUP ihre Rollen tauschen, wenn man Graph und Dualgraph betrachtet. Der SUP-Graph verhält sich dabei zum RUP-Graphen wie elektrischer Strom durch einen Leiter zum induzierten Magnetfeld. Ausgehend von dieser Charakterisierung ist es möglich einen Linearzeit-Algorithmus zu entwickeln, der entscheidet ob ein gerichteter Graph ohne Quellen und Senken ein RUP-Graph ist, während der allgemeine Fall NP-hart ist [Bra14]

Planar Phylogenetic Networks

A phylogenetic network is a rooted, directed acyclic graph, with a single root, whose sinks correspond to a set of species. Such networks are commonly used to represent the evolution of species that have undergone reticulate evolution. Recently, there has been great interest in developing the theory behind and algorithms for constructing such networks. One issue with phylogenetic networks is that, unlike rooted evolutionary trees, they can be highly non-planar (i.e. it is not possible to draw them in the plane without some arcs crossing). This can make them difficult to visualise and interpret. In this paper we investigate properties of planar phylogenetic networks and algorithms for deciding whether or not phylogenetic networks have certain special planarity properties. In particular, as well as defining some natural subclasses of planar phylogenetic networks and working out their interrelationships, we characterize when the well-known level-k networks are planar as well as showing that planar regular networks are closely related to pyramids. Our results make use of the highly developed field of planar digraphs, and we believe that the link between phylogenetic networks and this field should prove useful in future for developing new approaches to both construct and visualise phylogenetic networks