Heterogeneous computing with an algorithmic skeleton framework

The Graphics Processing Unit (GPU) is present in almost every modern day personal computer. Despite its specific purpose design, they have been increasingly used for general computations with very good results. Hence, there is a growing effort from the community to seamlessly integrate this kind of devices in everyday computing. However, to fully exploit the potential of a system comprising GPUs and CPUs, these devices should be presented to the programmer as a single platform. The efficient combination of the power of CPU and GPU devices is highly dependent on each device’s characteristics, resulting in platform specific applications that cannot be ported to different systems. Also, the most efficient work balance among devices is highly dependable on the computations to be performed and respective data sizes. In this work, we propose a solution for heterogeneous environments based on the abstraction level provided by algorithmic skeletons. Our goal is to take full advantage of the power of all CPU and GPU devices present in a system, without the need for different kernel implementations nor explicit work-distribution.To that end, we extended Marrow, an algorithmic skeleton framework for multi-GPUs, to support CPU computations and efficiently balance the work-load between devices. Our approach is based on an offline training execution that identifies the ideal work balance and platform configurations for a given application and input data size. The evaluation of this work shows that the combination of CPU and GPU devices can significantly boost the performance of our benchmarks in the tested environments, when compared to GPU-only executions

Dynamic expressivity with static optimization for streaming languages

Developers increasingly use streaming languages to write applications that process large volumes of data with high throughput. Unfortunately, when picking which streaming language to use, they face a difficult choice. On the one hand, dynamically scheduled languages allow developers to write a wider range of applications, but cannot take advantage of many crucial optimizations. On the other hand, statically scheduled languages are extremely performant, but have difficulty expressing many important streaming applications. This paper presents the design of a hybrid scheduler for stream processing languages. The compiler partitions the streaming application into coarse-grained subgraphs separated by dynamic rate boundaries. It then applies static optimizations to those subgraphs. We have implemented this scheduler as an extension to the StreamIt compiler. To evaluate its performance, we compare it to three scheduling techniques used by dynamic systems (OS thread, demand, and no-op) on a combination of micro-benchmarks and real-world inspired synthetic benchmarks. Our scheduler not only allows the previously static version of StreamIt to run dynamic rate applications, but it outperforms the three dynamic alternatives. This demonstrates that our scheduler strikes the right balance between expressivity and performance for stream processing languages.National Science Foundation (U.S.) (CCF-1162444

Explainable and Resource-Efficient Stream Processing Through Provenance and Scheduling

In our era of big data, information is captured at unprecedented volumes and velocities, with technologies such as Cyber-Physical Systems making quick decisions based on the processing of streaming, unbounded datasets. In such scenarios, it can be beneficial to process the data in an online manner, using the stream processing paradigm implemented by Stream Processing Engines (SPEs). While SPEs enable high-throughput, low-latency analysis, they are faced with challenges connected to evolving deployment scenarios, like the increasing use of heterogeneous, resource-constrained edge devices together with cloud resources and the increasing user expectations for usability, control, and resource-efficiency, on par with features provided by traditional databases.This thesis tackles open challenges regarding making stream processing more user-friendly, customizable, and resource-efficient. The first part outlines our work, providing high-level background information, descriptions of the research problems, and our contributions. The second part presents our three state-of-the-art frameworks for explainable data streaming using data provenance, which can help users of streaming queries to identify important data points, explain unexpected behaviors, and aid query understanding and debugging. (A) GeneaLog provides backward provenance allowing users to identify the inputs that contributed to the generation of each output of a streaming query. (B) Ananke is the first framework to provide a duplicate-free graph of live forward provenance, enabling easy bidirectional tracing of input-output relationships in streaming queries and identifying data points that have finished contributing to results. (C) Erebus is the first framework that allows users to define expectations about the results of a streaming query, validating whether these expectations are met or providing explanations in the form of why-not provenance otherwise. The third part presents techniques for execution efficiency through custom scheduling, introducing our state-of-the-art scheduling frameworks that control resource allocation and achieve user-defined performance goals. (D) Haren is an SPE-agnostic user-level scheduler that can efficiently enforce user-defined scheduling policies. (E) Lachesis is a standalone scheduling middleware that requires no changes to SPEs but, instead, directly guides the scheduling decisions of the underlying Operating System. Our extensive evaluations using real-world SPEs and workloads show that our work significantly improves over the state-of-the-art while introducing only small performance overheads

Patterns for distributed real-time stream processing

In recent years, big data systems have become an active area of research and development. Stream processing is one of the potential application scenarios of big data systems where the goal is to process a continuous, high velocity flow of information items. High frequency trading (HFT) in stock markets or trending topic detection in Twitter are some examples of stream processing applications. In some cases (like, for instance, in HFT), these applications have end-to-end quality-of-service requirements and may benefit from the usage of real-time techniques. Taking this into account, the present article analyzes, from the point of view of real-time systems, a set of patterns that can be used when implementing a stream processing application. For each pattern, we discuss its advantages and disadvantages, as well as its impact in application performance, measured as response time, maximum input frequency and changes in utilization demands due to the pattern.This work been partially supported by Distributed Java Infrastructure for Real-Time Big Data (CAS14/00118). It has been also partially funded by eMadrid (S2013/ICE-2715), HERMES-MARTDRIVER (TIN2013-46801-C4-2-R) and AUDACity (TIN2016-77158-C4-1-R); and also by European Union's 7th Framework Program under Grant Agreement FP7-IC6-318763. We are also in debt with our anonymous reviewers that improved the quality of the article

Recent Advances in Graph Partitioning

We survey recent trends in practical algorithms for balanced graph partitioning together with applications and future research directions

An Efficient Execution Model for Reactive Stream Programs

Stream programming is a paradigm where a program is structured by a set of computational nodes connected by streams. Focusing on data moving between computational nodes via streams, this programming model fits well for applications that process long sequences of data. We call such applications reactive stream programs (RSPs) to distinguish them from stream programs with rather small and finite input data. In stream programming, concurrency is expressed implicitly via communication streams. This helps to reduce the complexity of parallel programming. For this reason, stream programming has gained popularity as a programming model for parallel platforms. However, it is also challenging to analyse and improve the performance without an understanding of the program's internal behaviour. This thesis targets an effi cient execution model for deploying RSPs on parallel platforms. This execution model includes a monitoring framework to understand the internal behaviour of RSPs, scheduling strategies for RSPs on uniform shared-memory platforms; and mapping techniques for deploying RSPs on heterogeneous distributed platforms. The foundation of the execution model is based on a study of the performance of RSPs in terms of throughput and latency. This study includes quantitative formulae for throughput and latency; and the identification of factors that influence these performance metrics. Based on the study of RSP performance, this thesis exploits characteristics of RSPs to derive effective scheduling strategies on uniform shared-memory platforms. Aiming to optimise both throughput and latency, these scheduling strategies are implemented in two heuristic-based schedulers. Both of them are designed to be centralised to provide load balancing for RSPs with dynamic behaviour as well as dynamic structures. The first one uses the notion of positive and negative data demands on each stream to determine the scheduling priorities. This scheduler is independent from the runtime system. The second one requires the runtime system to provide the position information for each computational node in the RSP; and uses that to decide the scheduling priorities. Our experiments show that both schedulers provides similar performance while being significantly better than a reference implementation without dynamic load balancing. Also based on the study of RSP performance, we present in this thesis two new heuristic partitioning algorithms which are used to map RSPs onto heterogeneous distributed platforms. These are Kernighan-Lin Adaptation (KLA) and Congestion Avoidance (CA), where the main objective is to optimise the throughput. This is a multi-parameter optimisation problem where existing graph partitioning algorithms are not applicable. Compared to the generic meta-heuristic Simulated Annealing algorithm, both proposed algorithms achieve equally good or better results. KLA is faster for small benchmarks while slower for large ones. In contrast, CA is always orders of magnitudes faster even for very large benchmarks

Scaling Kernel Speedup to Application-Level Performance with CGRAS: Stream Program

Department of Electrical EngineeringWhile accelerators often generate impressive speedup at the kernel level, the speedup often do not scale to the application-level performance improvement due to several reasons. In this paper we identify key factors impacting the application-level performance of CGRA (Coarse-Grained Recon???gurable Architecture) accelerators using stream programs as the target application. As a practical remedy, we also propose a low-cost architecture extension focusing on the nested loops appearing very frequently in stream programs. We also present detailed application-level performance evaluation for the full StreamIt benchmark applications, which suggests that CGRAs can realistically accelerate stream applications by 3.6???4.0 times on average, compared to software-only execution on a typical mobile processor.ope