On tree-partitions of graphs

A graph G admits a tree-partition of width k if its vertex set can be partitioned into sets of size at most k so that the graph obtained by identifying the vertices in each set of the partition, and then deleting loops and parallel edges, is a forest. In the paper, we characterize the classes of graphs (finite and infinite) of bounded tree-partition-width in terms of excluded topological minors

Large Graph Analysis in the GMine System

Current applications have produced graphs on the order of hundreds of thousands of nodes and millions of edges. To take advantage of such graphs, one must be able to find patterns, outliers and communities. These tasks are better performed in an interactive environment, where human expertise can guide the process. For large graphs, though, there are some challenges: the excessive processing requirements are prohibitive, and drawing hundred-thousand nodes results in cluttered images hard to comprehend. To cope with these problems, we propose an innovative framework suited for any kind of tree-like graph visual design. GMine integrates (a) a representation for graphs organized as hierarchies of partitions - the concepts of SuperGraph and Graph-Tree; and (b) a graph summarization methodology - CEPS. Our graph representation deals with the problem of tracing the connection aspects of a graph hierarchy with sub linear complexity, allowing one to grasp the neighborhood of a single node or of a group of nodes in a single click. As a proof of concept, the visual environment of GMine is instantiated as a system in which large graphs can be investigated globally and locally

On the structure of random unlabelled acyclic graphs

AbstractOne can use Poisson approximation techniques to get results about the asymptotics of graphical properties on random unlabelled acyclic graphs i.e., on random unlabelled free (rootless) trees. We will use some “colored” partitions to get some rough descriptions of the structure of “most” unlabelled acyclic graphs. In particular, we will prove that for any fixed rooted tree T, almost every sufficiently large acyclic graph has a “subtree” isomorphic to T. We can use this result to get a zero-one law for Monadic Second Order queries on random unlabelled acyclic graphs

Estimating Infection Sources in Networks Using Partial Timestamps

We study the problem of identifying infection sources in a network based on the network topology, and a subset of infection timestamps. In the case of a single infection source in a tree network, we derive the maximum likelihood estimator of the source and the unknown diffusion parameters. We then introduce a new heuristic involving an optimization over a parametrized family of Gromov matrices to develop a single source estimation algorithm for general graphs. Compared with the breadth-first search tree heuristic commonly adopted in the literature, simulations demonstrate that our approach achieves better estimation accuracy than several other benchmark algorithms, even though these require more information like the diffusion parameters. We next develop a multiple sources estimation algorithm for general graphs, which first partitions the graph into source candidate clusters, and then applies our single source estimation algorithm to each cluster. We show that if the graph is a tree, then each source candidate cluster contains at least one source. Simulations using synthetic and real networks, and experiments using real-world data suggest that our proposed algorithms are able to estimate the true infection source(s) to within a small number of hops with a small portion of the infection timestamps being observed.Comment: 15 pages, 15 figures, accepted by IEEE Transactions on Information Forensics and Securit

On the linear extension complexity of stable set polytopes for perfect graphs

We study the linear extension complexity of stable set polytopes of perfect graphs. We make use of known structural results permitting to decompose perfect graphs into basic perfect graphs by means of two graph operations: 2-join and skew partitions. Exploiting the link between extension complexity and the nonnegative rank of an associated slack matrix, we investigate the behaviour of the extension complexity under these graph operations. We show bounds for the extension complexity of the stable set polytope of a perfect graph G depending linearly on the size of G and involving the depth of a decomposition tree of G in terms of basic perfect graphs

Split and join: strong partitions and Universal Steiner trees for graphs

We study the problem of constructing universal Steiner trees for undirected graphs. Given a graph G and a root node r, we seek a single spanning tree T of minimum stretch, where the stretch of T is defined to be the maximum ratio, over all subsets of terminals X, of the ratio of the cost of the sub-tree TX that connects r to X to the cost of an optimal Steiner tree connecting X to r. Universal Steiner trees (USTs) are important for data aggregation problems where computing the Steiner tree from scratch for every input instance of terminals is costly, as for example in low energy sensor network applications. We provide a polynomial time UST construction for general graphs with 2O(√log n)-stretch. We also give a polynomial time polylogarithmic-stretch construction for minor-free graphs. One basic building block in our algorithm is a hierarchy of graph partitions, each of which guarantees small strong cluster diameter and bounded local neighbourhood intersections. Our partition hierarchy for minor-free graphs is based on the solution to a cluster aggregation problem that may be of independent interest. To our knowledge, this is the first sub-linear UST result for general graphs, and the first polylogarithmic construction for minor-free graphs