1,061 research outputs found
Dynamic gas temperature measurements using a personal computer for data acquisition and reduction
This report describes a dynamic gas temperature measurement system. It has frequency response to 1000 Hz, and can be used to measure temperatures in hot, high pressure, high velocity flows. A personal computer is used for collecting and processing data, which results in a much shorter wait for results than previously. The data collection process and the user interface are described in detail. The changes made in transporting the software from a mainframe to a personal computer are described in appendices, as is the overall theory of operation
Two-Flux and Green's Function Method for Transient Radiative Transfer in a Semi-Transparent Layer
A method using a Green's function is developed for computing transient temperatures in a semitransparent layer by using the two-flux method coupled with the transient energy equation. Each boundary of the layer is exposed to a hot or cold radiative environment, and is heated or cooled by convection. The layer refractive index is larger than one, and the effect of internal reflections is included with the boundaries assumed diffuse. The analysis accounts for internal emission, absorption, heat conduction, and isotropic scattering. Spectrally dependent radiative properties are included, and transient results are given to illustrate two-band spectral behavior with optically thin and thick bands. Transient results using the present Green's function method are verified for a gray layer by comparison with a finite difference solution of the exact radiative transfer equations; excellent agreement is obtained. The present method requires only moderate computing times and incorporates isotropic scattering without additional complexity. Typical temperature distributions are given to illustrate application of the method by examining the effect of strong radiative heating on one side of a layer with convective cooling on the other side, and the interaction of strong convective heating with radiative cooling from the layer interior
Self-consistent analytic solution for the current and the access resistance in open ion channels.
A self-consistent analytic approach is introduced for the estimation of the access resistance and the current through an open ion channel for an arbitrary number of species. For an ion current flowing radially inward from infinity to the channel mouth, the Poisson-Boltzmann-Nernst-Planck equations are solved analytically in the bulk with spherical symmetry in three dimensions, by linearization. Within the channel, the Poisson-Nernst-Planck equation is solved analytically in a one-dimensional approximation. An iterative procedure is used to match the two solutions together at the channel mouth in a self-consistent way. It is shown that the currentvoltage characteristics obtained are in good quantitative agreement with experimental measurements
Dissipation and spontaneous symmetry breaking in brain dynamics
We compare the predictions of the dissipative quantum model of brain with
neurophysiological data collected from electroencephalograms resulting from
high-density arrays fixed on the surfaces of primary sensory and limbic areas
of trained rabbits and cats. Functional brain imaging in relation to behavior
reveals the formation of coherent domains of synchronized neuronal oscillatory
activity and phase transitions predicted by the dissipative model.Comment: Restyled, slight changes in title and abstract, updated bibliography,
J. Phys. A: Math. Theor. Vol. 41 (2008) in prin
Nonlinear brain dynamics as macroscopic manifestation of underlying many-body field dynamics
Neural activity patterns related to behavior occur at many scales in time and
space from the atomic and molecular to the whole brain. Here we explore the
feasibility of interpreting neurophysiological data in the context of many-body
physics by using tools that physicists have devised to analyze comparable
hierarchies in other fields of science. We focus on a mesoscopic level that
offers a multi-step pathway between the microscopic functions of neurons and
the macroscopic functions of brain systems revealed by hemodynamic imaging. We
use electroencephalographic (EEG) records collected from high-density electrode
arrays fixed on the epidural surfaces of primary sensory and limbic areas in
rabbits and cats trained to discriminate conditioned stimuli (CS) in the
various modalities. High temporal resolution of EEG signals with the Hilbert
transform gives evidence for diverse intermittent spatial patterns of amplitude
(AM) and phase modulations (PM) of carrier waves that repeatedly re-synchronize
in the beta and gamma ranges at near zero time lags over long distances. The
dominant mechanism for neural interactions by axodendritic synaptic
transmission should impose distance-dependent delays on the EEG oscillations
owing to finite propagation velocities. It does not. EEGs instead show evidence
for anomalous dispersion: the existence in neural populations of a low velocity
range of information and energy transfers, and a high velocity range of the
spread of phase transitions. This distinction labels the phenomenon but does
not explain it. In this report we explore the analysis of these phenomena using
concepts of energy dissipation, the maintenance by cortex of multiple ground
states corresponding to AM patterns, and the exclusive selection by spontaneous
breakdown of symmetry (SBS) of single states in sequences.Comment: 31 page
Verticalization of bacterial biofilms
Biofilms are communities of bacteria adhered to surfaces. Recently, biofilms
of rod-shaped bacteria were observed at single-cell resolution and shown to
develop from a disordered, two-dimensional layer of founder cells into a
three-dimensional structure with a vertically-aligned core. Here, we elucidate
the physical mechanism underpinning this transition using a combination of
agent-based and continuum modeling. We find that verticalization proceeds
through a series of localized mechanical instabilities on the cellular scale.
For short cells, these instabilities are primarily triggered by cell division,
whereas long cells are more likely to be peeled off the surface by nearby
vertical cells, creating an "inverse domino effect". The interplay between cell
growth and cell verticalization gives rise to an exotic mechanical state in
which the effective surface pressure becomes constant throughout the growing
core of the biofilm surface layer. This dynamical isobaricity determines the
expansion speed of a biofilm cluster and thereby governs how cells access the
third dimension. In particular, theory predicts that a longer average cell
length yields more rapidly expanding, flatter biofilms. We experimentally show
that such changes in biofilm development occur by exploiting chemicals that
modulate cell length.Comment: Main text 10 pages, 4 figures; Supplementary Information 35 pages, 15
figure
Low magnetic-Prandtl number flow configurations for cold astrophysical disk models: speculation and analysis
Simulations of astrophysical disks in the shearing box that are subject to
the magnetorotational instability (MRI) show that activity appears to be
reduced as the magnetic Prandtl number (Pm) is lowered. On the other hand,
calculations for laboratory experiments show that saturation is achieved
through modification of the background shear for Pm << 1. Guided by the results
of calculations appropriate for laboratory experiments when Pm is very low, the
axisymmetric stability of inviscid disturbances in a shearing box model
immersed in a constant vertical background magnetic field is considered under a
variety of shear profiles and boundary conditions in order to evaluate the
hypothesis that modifications of the shear bring about saturation of the
instability. It is found that the emergence and stability of the MRI is
sensitive to the boundary conditions adopted. Channel modes do not appear to be
stabilized through any modification of the background shear whose average
remains Keplerian. However, systems that have non-penetrative boundaries can
saturate the MRI through modification of the background shear. Conceptually
equating the qualitative results from laboratory experiments to the conditions
in a disk may therefore be misleading.Comment: To Appear in Astronomy and Astrophysic
Mechanics of motility initiation and motility arrest in crawling cells
Motility initiation in crawling cells requires transformation of a symmetric
state into a polarized state. In contrast, motility arrest is associated with
re-symmetrization of the internal configuration of a cell. Experiments on
keratocytes suggest that polarization is triggered by the increased
contractility of motor proteins but the conditions of re-symmetrization remain
unknown. In this paper we show that if adhesion with the extra-cellular
substrate is sufficiently low, the progressive intensification of motor-induced
contraction may be responsible for both transitions: from static (symmetric) to
motile (polarized) at a lower contractility threshold and from motile
(polarized) back to static (symmetric) at a higher contractility threshold. Our
model of lamellipodial cell motility is based on a 1D projection of the complex
intra-cellular dynamics on the direction of locomotion. In the interest of
analytical transparency we also neglect active protrusion and view adhesion as
passive. Despite the unavoidable oversimplifications associated with these
assumptions, the model reproduces quantitatively the motility initiation
pattern in fish keratocytes and reveals a crucial role played in cell motility
by the nonlocal feedback between the mechanics and the transport of active
agents. A prediction of the model that a crawling cell can stop and
re-symmetrize when contractility increases sufficiently far beyond the motility
initiation threshold still awaits experimental verification
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