The Graph Motif problem parameterized by the structure of the input graph

The Graph Motif problem was introduced in 2006 in the context of biological networks. It consists of deciding whether or not a multiset of colors occurs in a connected subgraph of a vertex-colored graph. Graph Motif has been mostly analyzed from the standpoint of parameterized complexity. The main parameters which came into consideration were the size of the multiset and the number of colors. Though, in the many applications of Graph Motif, the input graph originates from real-life and has structure. Motivated by this prosaic observation, we systematically study its complexity relatively to graph structural parameters. For a wide range of parameters, we give new or improved FPT algorithms, or show that the problem remains intractable. For the FPT cases, we also give some kernelization lower bounds as well as some ETH-based lower bounds on the worst case running time. Interestingly, we establish that Graph Motif is W[1]-hard (while in W[P]) for parameter max leaf number, which is, to the best of our knowledge, the first problem to behave this way.Comment: 24 pages, accepted in DAM, conference version in IPEC 201

Energy Complexity of Distance Computation in Multi-hop Networks

Energy efficiency is a critical issue for wireless devices operated under stringent power constraint (e.g., battery). Following prior works, we measure the energy cost of a device by its transceiver usage, and define the energy complexity of an algorithm as the maximum number of time slots a device transmits or listens, over all devices. In a recent paper of Chang et al. (PODC 2018), it was shown that broadcasting in a multi-hop network of unknown topology can be done in $\text{poly} \log n$ energy. In this paper, we continue this line of research, and investigate the energy complexity of other fundamental graph problems in multi-hop networks. Our results are summarized as follows. 1. To avoid spending $\Omega(D)$ energy, the broadcasting protocols of Chang et al. (PODC 2018) do not send the message along a BFS tree, and it is open whether BFS could be computed in $o(D)$ energy, for sufficiently large $D$. In this paper we devise an algorithm that attains $\tilde{O}(\sqrt{n})$ energy cost. 2. We show that the framework of the ${\Omega}(n)$ round lower bound proof for computing diameter in CONGEST of Abboud et al. (DISC 2017) can be adapted to give an $\tilde{\Omega}(n)$ energy lower bound in the wireless network model (with no message size constraint), and this lower bound applies to $O(\log n)$-arboricity graphs. From the upper bound side, we show that the energy complexity of $\tilde{O}(\sqrt{n})$ can be attained for bounded-genus graphs (which includes planar graphs). 3. Our upper bounds for computing diameter can be extended to other graph problems. We show that exact global minimum cut or approximate $s$--$t$ minimum cut can be computed in $\tilde{O}(\sqrt{n})$ energy for bounded-genus graphs

Parameterized Inapproximability of Target Set Selection and Generalizations

In this paper, we consider the Target Set Selection problem: given a graph and a threshold value $thr(v)$ for any vertex $v$ of the graph, find a minimum size vertex-subset to "activate" s.t. all the vertices of the graph are activated at the end of the propagation process. A vertex $v$ is activated during the propagation process if at least $thr(v)$ of its neighbors are activated. This problem models several practical issues like faults in distributed networks or word-to-mouth recommendations in social networks. We show that for any functions $f$ and $\rho$ this problem cannot be approximated within a factor of $\rho(k)$ in $f(k) \cdot n^{O(1)}$ time, unless FPT = W[P], even for restricted thresholds (namely constant and majority thresholds). We also study the cardinality constraint maximization and minimization versions of the problem for which we prove similar hardness results

Parameterized Complexity of Graph Constraint Logic

Graph constraint logic is a framework introduced by Hearn and Demaine, which provides several problems that are often a convenient starting point for reductions. We study the parameterized complexity of Constraint Graph Satisfiability and both bounded and unbounded versions of Nondeterministic Constraint Logic (NCL) with respect to solution length, treewidth and maximum degree of the underlying constraint graph as parameters. As a main result we show that restricted NCL remains PSPACE-complete on graphs of bounded bandwidth, strengthening Hearn and Demaine's framework. This allows us to improve upon existing results obtained by reduction from NCL. We show that reconfiguration versions of several classical graph problems (including independent set, feedback vertex set and dominating set) are PSPACE-complete on planar graphs of bounded bandwidth and that Rush Hour, generalized to $k\times n$ boards, is PSPACE-complete even when $k$ is at most a constant

Covering Small Independent Sets and Separators with Applications to Parameterized Algorithms

We present two new combinatorial tools for the design of parameterized algorithms. The first is a simple linear time randomized algorithm that given as input a $d$-degenerate graph $G$ and an integer $k$, outputs an independent set $Y$, such that for every independent set $X$ in $G$ of size at most $k$, the probability that $X$ is a subset of $Y$ is at least $\left({(d+1)k \choose k} \cdot k(d+1)\right)^{-1}$.The second is a new (deterministic) polynomial time graph sparsification procedure that given a graph $G$, a set $T = \{\{s_1, t_1\}, \{s_2, t_2\}, \ldots, \{s_\ell, t_\ell\}\}$ of terminal pairs and an integer $k$, returns an induced subgraph $G^\star$ of $G$ that maintains all the inclusion minimal multicuts of $G$ of size at most $k$, and does not contain any $(k+2)$-vertex connected set of size $2^{{\cal O}(k)}$. In particular, $G^\star$ excludes a clique of size $2^{{\cal O}(k)}$ as a topological minor. Put together, our new tools yield new randomized fixed parameter tractable (FPT) algorithms for Stable $s$-$t$ Separator, Stable Odd Cycle Transversal and Stable Multicut on general graphs, and for Stable Directed Feedback Vertex Set on $d$-degenerate graphs, resolving two problems left open by Marx et al. [ACM Transactions on Algorithms, 2013]. All of our algorithms can be derandomized at the cost of a small overhead in the running time.Comment: 35 page