Independent Set, Induced Matching, and Pricing: Connections and Tight (Subexponential Time) Approximation Hardnesses

We present a series of almost settled inapproximability results for three fundamental problems. The first in our series is the subexponential-time inapproximability of the maximum independent set problem, a question studied in the area of parameterized complexity. The second is the hardness of approximating the maximum induced matching problem on bounded-degree bipartite graphs. The last in our series is the tight hardness of approximating the k-hypergraph pricing problem, a fundamental problem arising from the area of algorithmic game theory. In particular, assuming the Exponential Time Hypothesis, our two main results are: - For any r larger than some constant, any r-approximation algorithm for the maximum independent set problem must run in at least 2^{n^{1-\epsilon}/r^{1+\epsilon}} time. This nearly matches the upper bound of 2^{n/r} (Cygan et al., 2008). It also improves some hardness results in the domain of parameterized complexity (e.g., Escoffier et al., 2012 and Chitnis et al., 2013) - For any k larger than some constant, there is no polynomial time min (k^{1-\epsilon}, n^{1/2-\epsilon})-approximation algorithm for the k-hypergraph pricing problem, where n is the number of vertices in an input graph. This almost matches the upper bound of min (O(k), \tilde O(\sqrt{n})) (by Balcan and Blum, 2007 and an algorithm in this paper). We note an interesting fact that, in contrast to n^{1/2-\epsilon} hardness for polynomial-time algorithms, the k-hypergraph pricing problem admits n^{\delta} approximation for any \delta >0 in quasi-polynomial time. This puts this problem in a rare approximability class in which approximability thresholds can be improved significantly by allowing algorithms to run in quasi-polynomial time.Comment: The full version of FOCS 201

Percolation on sparse random graphs with given degree sequence

We study the two most common types of percolation process on a sparse random graph with a given degree sequence. Namely, we examine first a bond percolation process where the edges of the graph are retained with probability p and afterwards we focus on site percolation where the vertices are retained with probability p. We establish critical values for p above which a giant component emerges in both cases. Moreover, we show that in fact these coincide. As a special case, our results apply to power law random graphs. We obtain rigorous proofs for formulas derived by several physicists for such graphs.Comment: 20 page

Graphs Identified by Logics with Counting

We classify graphs and, more generally, finite relational structures that are identified by C2, that is, two-variable first-order logic with counting. Using this classification, we show that it can be decided in almost linear time whether a structure is identified by C2. Our classification implies that for every graph identified by this logic, all vertex-colored versions of it are also identified. A similar statement is true for finite relational structures. We provide constructions that solve the inversion problem for finite structures in linear time. This problem has previously been shown to be polynomial time solvable by Martin Otto. For graphs, we conclude that every C2-equivalence class contains a graph whose orbits are exactly the classes of the C2-partition of its vertex set and which has a single automorphism witnessing this fact. For general k, we show that such statements are not true by providing examples of graphs of size linear in k which are identified by C3 but for which the orbit partition is strictly finer than the Ck-partition. We also provide identified graphs which have vertex-colored versions that are not identified by Ck.Comment: 33 pages, 8 Figure

Vertex decomposable graphs, codismantlability, Cohen-Macaulayness and Castelnuovo-Mumford regularity

We call a (simple) graph G codismantlable if either it has no edges or else it has a codominated vertex x, meaning that the closed neighborhood of x contains that of one of its neighbor, such that G-x codismantlable. We prove that if G is well-covered and it lacks induced cycles of length four, five and seven, than the vertex decomposability, codismantlability and Cohen-Macaulayness for G are all equivalent. The rest deals with the computation of Castelnuovo-Mumford regularity of codismantlable graphs. Note that our approach complements and unifies many of the earlier results on bipartite, chordal and very well-covered graphs

Maximum common subgraph isomorphism algorithms for the matching of chemical structures

The maximum common subgraph (MCS) problem has become increasingly important in those aspects of chemoinformatics that involve the matching of 2D or 3D chemical structures. This paper provides a classification and a review of the many MCS algorithms, both exact and approximate, that have been described in the literature, and makes recommendations regarding their applicability to typical chemoinformatics tasks

On the expected number of perfect matchings in cubic planar graphs

A well-known conjecture by Lov\'asz and Plummer from the 1970s asserted that a bridgeless cubic graph has exponentially many perfect matchings. It was solved in the affirmative by Esperet et al. (Adv. Math. 2011). On the other hand, Chudnovsky and Seymour (Combinatorica 2012) proved the conjecture in the special case of cubic planar graphs. In our work we consider random bridgeless cubic planar graphs with the uniform distribution on graphs with $n$ vertices. Under this model we show that the expected number of perfect matchings in labeled bridgeless cubic planar graphs is asymptotically $c\gamma^n$, where $c>0$ and $\gamma \sim 1.14196$ is an explicit algebraic number. We also compute the expected number of perfect matchings in (non necessarily bridgeless) cubic planar graphs and provide lower bounds for unlabeled graphs. Our starting point is a correspondence between counting perfect matchings in rooted cubic planar maps and the partition function of the Ising model in rooted triangulations.Comment: 19 pages, 4 figure

Matchings, coverings, and Castelnuovo-Mumford regularity

We show that the co-chordal cover number of a graph G gives an upper bound for the Castelnuovo-Mumford regularity of the associated edge ideal. Several known combinatorial upper bounds of regularity for edge ideals are then easy consequences of covering results from graph theory, and we derive new upper bounds by looking at additional covering results.Comment: 12 pages; v4 has minor changes for publicatio